RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 Q8N9P0 234 aaPredicted RBP9.14□□□□□ -0.95
ITGB4-206ENST00000579662 LINC01558Q9Y6Z2 57 aa9.12□□□□□ -0.95
ITGB4-206ENST00000579662 Q5VSD8 79 aa9.11□□□□□ -0.95
ITGB4-206ENST00000579662 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
ITGB4-206ENST00000579662 Q6ZR54 194 aa9.1□□□□□ -0.95
ITGB4-206ENST00000579662 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
ITGB4-206ENST00000579662 S4R3F8 94 aa9.09□□□□□ -0.95
ITGB4-206ENST00000579662 CSAG1Q6PB30 78 aa9.09□□□□□ -0.95
ITGB4-206ENST00000579662 CENPEQ02224 2701 aa9.08□□□□□ -0.96
ITGB4-206ENST00000579662 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
ITGB4-206ENST00000579662 SPINK7P58062 85 aa9.05□□□□□ -0.96
ITGB4-206ENST00000579662 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
ITGB4-206ENST00000579662 MGAQ8IWI9 3026 aa9.03□□□□□ -0.96
ITGB4-206ENST00000579662 DMAC1Q96GE9 116 aa9.03□□□□□ -0.96
ITGB4-206ENST00000579662 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
ITGB4-206ENST00000579662 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
ITGB4-206ENST00000579662 M0R2T5 61 aa9.01□□□□□ -0.97
ITGB4-206ENST00000579662 CAMK2N1Q7Z7J9 78 aa9.01□□□□□ -0.97
ITGB4-206ENST00000579662 PANO1I0J062 215 aa9□□□□□ -0.97
ITGB4-206ENST00000579662 PCNTO95613 3336 aa8.98□□□□□ -0.97
ITGB4-206ENST00000579662 UNC79Q9P2D8 2635 aa8.97□□□□□ -0.97
ITGB4-206ENST00000579662 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
ITGB4-206ENST00000579662 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
ITGB4-206ENST00000579662 Q5XG85 94 aa8.94□□□□□ -0.98
ITGB4-206ENST00000579662 TEX15Q9BXT5 2789 aa8.91□□□□□ -0.98
ITGB4-206ENST00000579662 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
ITGB4-206ENST00000579662 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
ITGB4-206ENST00000579662 Q5VV11 94 aa8.89□□□□□ -0.99
ITGB4-206ENST00000579662 CHD6Q8TD26 2715 aa8.89□□□□□ -0.99
ITGB4-206ENST00000579662 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
ITGB4-206ENST00000579662 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
ITGB4-206ENST00000579662 OXTP01178 125 aa8.87□□□□□ -0.99
ITGB4-206ENST00000579662 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
ITGB4-206ENST00000579662 A0A087X002 238 aa8.86□□□□□ -0.99
ITGB4-206ENST00000579662 MKI67P46013 3256 aaKnown RBP8.86□□□□□ -0.99
ITGB4-206ENST00000579662 COL6A5A8TX70 2615 aa8.86□□□□□ -0.99
ITGB4-206ENST00000579662 TEP1Q99973 2627 aaKnown RBP8.85□□□□□ -0.99
ITGB4-206ENST00000579662 R4GN34 69 aa8.85□□□□□ -0.99
ITGB4-206ENST00000579662 STAB1Q9NY15 2570 aa8.85□□□□□ -0.99
ITGB4-206ENST00000579662 GCN1Q92616 2671 aaKnown RBP8.84□□□□□ -0.99
ITGB4-206ENST00000579662 LUZP6Q538Z0 58 aa8.83□□□□□ -1
ITGB4-206ENST00000579662 DSPP15924 2871 aaKnown RBP8.81□□□□□ -1
ITGB4-206ENST00000579662 CFAP54Q96N23 3096 aa8.8□□□□□ -1
ITGB4-206ENST00000579662 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
ITGB4-206ENST00000579662 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
ITGB4-206ENST00000579662 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
ITGB4-206ENST00000579662 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
ITGB4-206ENST00000579662 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
ITGB4-206ENST00000579662 NBEAL1Q6ZS30 2694 aa8.75□□□□□ -1.01
ITGB4-206ENST00000579662 RPL37P61927 97 aaKnown RBP8.75□□□□□ -1.01
ITGB4-206ENST00000579662 KRTAP13-1Q8IUC0 172 aa8.74□□□□□ -1.01
ITGB4-206ENST00000579662 WDFY4Q6ZS81 3184 aa8.73□□□□□ -1.01
ITGB4-206ENST00000579662 BAHCC1Q9P281 2608 aa8.73□□□□□ -1.01
ITGB4-206ENST00000579662 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
ITGB4-206ENST00000579662 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
ITGB4-206ENST00000579662 M0QZ58 72 aa8.68□□□□□ -1.02
ITGB4-206ENST00000579662 BRCA2P51587 3418 aa8.67□□□□□ -1.02
ITGB4-206ENST00000579662 ROMO1P60602 79 aa8.66□□□□□ -1.02
ITGB4-206ENST00000579662 A0A0C4DFX4 3053 aa8.65□□□□□ -1.03
ITGB4-206ENST00000579662 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.03
ITGB4-206ENST00000579662 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
ITGB4-206ENST00000579662 ITPR2Q14571 2701 aa8.64□□□□□ -1.03
ITGB4-206ENST00000579662 PRUNE2Q8WUY3 3088 aa8.63□□□□□ -1.03
ITGB4-206ENST00000579662 ADM2Q7Z4H4 148 aa8.63□□□□□ -1.03
ITGB4-206ENST00000579662 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
ITGB4-206ENST00000579662 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
ITGB4-206ENST00000579662 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
ITGB4-206ENST00000579662 NSD1Q96L73 2696 aaPredicted RBP8.61□□□□□ -1.03
ITGB4-206ENST00000579662 UBR5O95071 2799 aaPredicted RBP8.6□□□□□ -1.03
ITGB4-206ENST00000579662 TRIOO75962 3097 aa8.6□□□□□ -1.03
ITGB4-206ENST00000579662 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
ITGB4-206ENST00000579662 ITPR1Q14643 2758 aa8.54□□□□□ -1.04
ITGB4-206ENST00000579662 FRYQ5TBA9 3013 aa8.53□□□□□ -1.04
ITGB4-206ENST00000579662 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
ITGB4-206ENST00000579662 SPATA8Q6RVD6 105 aa8.52□□□□□ -1.04
ITGB4-206ENST00000579662 VPS13AQ96RL7 3174 aa8.49□□□□□ -1.05
ITGB4-206ENST00000579662 MAP1AP78559 2803 aaPredicted RBP8.48□□□□□ -1.05
ITGB4-206ENST00000579662 FLNCQ14315 2725 aa8.47□□□□□ -1.05
ITGB4-206ENST00000579662 CDH23Q9H251 3354 aa8.47□□□□□ -1.05
ITGB4-206ENST00000579662 XIRP2A4UGR9 3374 aa8.44□□□□□ -1.06
ITGB4-206ENST00000579662 A8MUU9 505 aa8.4□□□□□ -1.06
ITGB4-206ENST00000579662 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
ITGB4-206ENST00000579662 UTP20O75691 2785 aaKnown RBP8.39□□□□□ -1.07
ITGB4-206ENST00000579662 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
ITGB4-206ENST00000579662 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
ITGB4-206ENST00000579662 ATMQ13315 3056 aa8.38□□□□□ -1.07
ITGB4-206ENST00000579662 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
ITGB4-206ENST00000579662 A0A0A0MQY5 61 aa8.35□□□□□ -1.07
ITGB4-206ENST00000579662 SZT2Q5T011 3432 aa8.32□□□□□ -1.08
ITGB4-206ENST00000579662 APCP25054 2843 aa8.3□□□□□ -1.08
ITGB4-206ENST00000579662 COL12A1Q99715 3063 aa8.3□□□□□ -1.08
ITGB4-206ENST00000579662 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
ITGB4-206ENST00000579662 KALRNO60229 2985 aa8.29□□□□□ -1.08
ITGB4-206ENST00000579662 A8MU10 97 aa8.28□□□□□ -1.08
ITGB4-206ENST00000579662 LRBAP50851 2863 aa8.28□□□□□ -1.08
ITGB4-206ENST00000579662 A6NN06 94 aa8.27□□□□□ -1.09
ITGB4-206ENST00000579662 LAMA1P25391 3075 aa8.27□□□□□ -1.09
ITGB4-206ENST00000579662 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
ITGB4-206ENST00000579662 FRYLO94915 3013 aa8.26□□□□□ -1.09
ITGB4-206ENST00000579662 TACC2O95359 2948 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms