RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 SNCGO76070 127 aa8.88□□□□□ -0.99
IFT20-208ENST00000578985 PSMB2P49721 201 aa8.87□□□□□ -0.99
IFT20-208ENST00000578985 FAM218AQ96MZ4 157 aa8.87□□□□□ -0.99
IFT20-208ENST00000578985 SPINK1P00995 79 aa8.85□□□□□ -0.99
IFT20-208ENST00000578985 PRR4Q16378 134 aa8.84□□□□□ -0.99
IFT20-208ENST00000578985 A0A1B0GX51 115 aa8.83□□□□□ -1
IFT20-208ENST00000578985 COX6CP09669 75 aa8.83□□□□□ -1
IFT20-208ENST00000578985 PPDPFLQ8WWR9 84 aa8.82□□□□□ -1
IFT20-208ENST00000578985 CLEC2BQ92478 149 aa8.82□□□□□ -1
IFT20-208ENST00000578985 F8WEM9 126 aa8.81□□□□□ -1
IFT20-208ENST00000578985 OCIAD2Q56VL3 154 aa8.81□□□□□ -1
IFT20-208ENST00000578985 RETNLBQ9BQ08 111 aa8.81□□□□□ -1
IFT20-208ENST00000578985 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
IFT20-208ENST00000578985 SNHG12Q9BXW3 62 aa8.79□□□□□ -1
IFT20-208ENST00000578985 SCGB1C2P0DMR2 95 aa8.78□□□□□ -1
IFT20-208ENST00000578985 HRCT1Q6UXD1 115 aa8.78□□□□□ -1
IFT20-208ENST00000578985 RNF213Q63HN8 5207 aa8.78□□□□□ -1
IFT20-208ENST00000578985 A0A0G2JQZ4 141 aa8.76□□□□□ -1.01
IFT20-208ENST00000578985 GHRHP01286 108 aa8.76□□□□□ -1.01
IFT20-208ENST00000578985 CD164Q04900 197 aa8.76□□□□□ -1.01
IFT20-208ENST00000578985 BATFQ16520 125 aa8.76□□□□□ -1.01
IFT20-208ENST00000578985 IGLV8-61A0A075B6I0 122 aa8.75□□□□□ -1.01
IFT20-208ENST00000578985 DNAL4O96015 105 aa8.75□□□□□ -1.01
IFT20-208ENST00000578985 Q6JHZ5 121 aa8.74□□□□□ -1.01
IFT20-208ENST00000578985 FABP2P12104 132 aa8.73□□□□□ -1.01
IFT20-208ENST00000578985 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
IFT20-208ENST00000578985 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
IFT20-208ENST00000578985 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
IFT20-208ENST00000578985 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
IFT20-208ENST00000578985 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
IFT20-208ENST00000578985 LRP2P98164 4655 aa8.72□□□□□ -1.01
IFT20-208ENST00000578985 H3BQ85 93 aa8.71□□□□□ -1.02
IFT20-208ENST00000578985 H3BUT2 72 aa8.71□□□□□ -1.02
IFT20-208ENST00000578985 LST1O00453 97 aa8.71□□□□□ -1.02
IFT20-208ENST00000578985 TRACP01848 142 aa8.71□□□□□ -1.02
IFT20-208ENST00000578985 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
IFT20-208ENST00000578985 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
IFT20-208ENST00000578985 H3BMG7 143 aa8.67□□□□□ -1.02
IFT20-208ENST00000578985 TMEM256-PLSCR3K7ERE1 68 aa8.67□□□□□ -1.02
IFT20-208ENST00000578985 ATXN8Q156A1 80 aa8.66□□□□□ -1.02
IFT20-208ENST00000578985 Q5XG85 94 aa8.66□□□□□ -1.02
IFT20-208ENST00000578985 TCL1BO95988 128 aa8.65□□□□□ -1.02
IFT20-208ENST00000578985 LYRM7Q5U5X0 104 aa8.65□□□□□ -1.02
IFT20-208ENST00000578985 TRBV7-7A0A0K0K1E9 115 aa8.63□□□□□ -1.03
IFT20-208ENST00000578985 C9orf118A6NHY6 69 aa8.63□□□□□ -1.03
IFT20-208ENST00000578985 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
IFT20-208ENST00000578985 UBE2V1Q13404 147 aa8.63□□□□□ -1.03
IFT20-208ENST00000578985 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
IFT20-208ENST00000578985 BAALC-AS2P0C853 105 aa8.62□□□□□ -1.03
IFT20-208ENST00000578985 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
IFT20-208ENST00000578985 A0A1B0GV72 72 aa8.6□□□□□ -1.03
IFT20-208ENST00000578985 C1orf195Q5TG92 126 aa8.6□□□□□ -1.03
IFT20-208ENST00000578985 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
IFT20-208ENST00000578985 Q6Q795 121 aa8.59□□□□□ -1.03
IFT20-208ENST00000578985 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
IFT20-208ENST00000578985 CDIP1Q9H305 208 aa8.59□□□□□ -1.03
IFT20-208ENST00000578985 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
IFT20-208ENST00000578985 LPAP08519 4548 aa8.57□□□□□ -1.04
IFT20-208ENST00000578985 A0A1W2PPM0 123 aa8.57□□□□□ -1.04
IFT20-208ENST00000578985 PCP4L1A6NKN8 68 aa8.56□□□□□ -1.04
IFT20-208ENST00000578985 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
IFT20-208ENST00000578985 COL5A1-AS1Q5SY13 56 aa8.56□□□□□ -1.04
IFT20-208ENST00000578985 A0A1W2PNM2 257 aa8.55□□□□□ -1.04
IFT20-208ENST00000578985 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
IFT20-208ENST00000578985 C9JAW5 83 aa8.53□□□□□ -1.04
IFT20-208ENST00000578985 SS18L2Q9UHA2 77 aa8.53□□□□□ -1.04
IFT20-208ENST00000578985 A0A087WSZ3 146 aa8.52□□□□□ -1.05
IFT20-208ENST00000578985 TRBV7-4A0A0J9YYF1 115 aa8.51□□□□□ -1.05
IFT20-208ENST00000578985 DSCR8Q96T75 97 aa8.51□□□□□ -1.05
IFT20-208ENST00000578985 CCKP06307 115 aa8.5□□□□□ -1.05
IFT20-208ENST00000578985 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
IFT20-208ENST00000578985 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
IFT20-208ENST00000578985 C9orf92A6NGG3 77 aa8.47□□□□□ -1.05
IFT20-208ENST00000578985 VPS25Q9BRG1 176 aa8.46□□□□□ -1.06
IFT20-208ENST00000578985 H3BT86 120 aa8.45□□□□□ -1.06
IFT20-208ENST00000578985 XP32Q5T750 250 aa8.44□□□□□ -1.06
IFT20-208ENST00000578985 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
IFT20-208ENST00000578985 LOC110117498A0A087WWA1 95 aa8.42□□□□□ -1.06
IFT20-208ENST00000578985 OBSCN-AS1Q96MR7 158 aa8.42□□□□□ -1.06
IFT20-208ENST00000578985 Q96NJ1 140 aa8.42□□□□□ -1.06
IFT20-208ENST00000578985 PDE6GP18545 87 aa8.41□□□□□ -1.06
IFT20-208ENST00000578985 Q6ZQT0 140 aa8.41□□□□□ -1.06
IFT20-208ENST00000578985 C14orf132Q9NPU4 83 aa8.41□□□□□ -1.06
IFT20-208ENST00000578985 K7EP34 96 aa8.39□□□□□ -1.07
IFT20-208ENST00000578985 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
IFT20-208ENST00000578985 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
IFT20-208ENST00000578985 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
IFT20-208ENST00000578985 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
IFT20-208ENST00000578985 LINC00472Q9H8W2 130 aa8.36□□□□□ -1.07
IFT20-208ENST00000578985 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
IFT20-208ENST00000578985 A0A1B0GW54 56 aa8.34□□□□□ -1.07
IFT20-208ENST00000578985 GTF2H5Q6ZYL4 71 aa8.34□□□□□ -1.07
IFT20-208ENST00000578985 PRO0461Q9UI25 63 aa8.34□□□□□ -1.07
IFT20-208ENST00000578985 DEFB116Q30KQ4 102 aa8.33□□□□□ -1.08
IFT20-208ENST00000578985 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
IFT20-208ENST00000578985 MUC2Q02817 5179 aa8.29□□□□□ -1.08
IFT20-208ENST00000578985 MUC17Q685J3 4493 aa8.29□□□□□ -1.08
IFT20-208ENST00000578985 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
IFT20-208ENST00000578985 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
IFT20-208ENST00000578985 J3KT08 172 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms