RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
CDC42EP4-203ENST00000578516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.35□□□□□ -0.43
CDC42EP4-203ENST00000578516 H0YGX0 51 aa12.33□□□□□ -0.44
CDC42EP4-203ENST00000578516 SPINK1P00995 79 aa12.33□□□□□ -0.44
CDC42EP4-203ENST00000578516 PSMB2P49721 201 aa12.33□□□□□ -0.44
CDC42EP4-203ENST00000578516 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
CDC42EP4-203ENST00000578516 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
CDC42EP4-203ENST00000578516 M0R143 59 aa12.26□□□□□ -0.45
CDC42EP4-203ENST00000578516 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
CDC42EP4-203ENST00000578516 F8WEM9 126 aa12.25□□□□□ -0.45
CDC42EP4-203ENST00000578516 H3BUT2 72 aa12.25□□□□□ -0.45
CDC42EP4-203ENST00000578516 RPS29P62273 56 aaKnown RBP12.24□□□□□ -0.45
CDC42EP4-203ENST00000578516 UBR4Q5T4S7 5183 aa12.24□□□□□ -0.45
CDC42EP4-203ENST00000578516 BATFQ16520 125 aa12.23□□□□□ -0.45
CDC42EP4-203ENST00000578516 IGFL1Q6UW32 110 aa12.21□□□□□ -0.45
CDC42EP4-203ENST00000578516 SNHG12Q9BXW3 62 aa12.21□□□□□ -0.45
CDC42EP4-203ENST00000578516 A0A1B0GX51 115 aa12.2□□□□□ -0.46
CDC42EP4-203ENST00000578516 OCIAD2Q56VL3 154 aa12.2□□□□□ -0.46
CDC42EP4-203ENST00000578516 PPDPFLQ8WWR9 84 aa12.19□□□□□ -0.46
CDC42EP4-203ENST00000578516 IGLV8-61A0A075B6I0 122 aa12.18□□□□□ -0.46
CDC42EP4-203ENST00000578516 COX6CP09669 75 aa12.18□□□□□ -0.46
CDC42EP4-203ENST00000578516 A0A1B0GV72 72 aa12.17□□□□□ -0.46
CDC42EP4-203ENST00000578516 SNCGO76070 127 aa12.17□□□□□ -0.46
CDC42EP4-203ENST00000578516 FABP2P12104 132 aa12.17□□□□□ -0.46
CDC42EP4-203ENST00000578516 CD164Q04900 197 aa12.17□□□□□ -0.46
CDC42EP4-203ENST00000578516 SCGB1C2P0DMR2 95 aa12.16□□□□□ -0.46
CDC42EP4-203ENST00000578516 NDUFV3P56181 108 aaKnown RBP12.16□□□□□ -0.46
CDC42EP4-203ENST00000578516 FP248Q71RG6 208 aaPredicted RBP12.15□□□□□ -0.46
CDC42EP4-203ENST00000578516 LIMD2Q9BT23 127 aa12.15□□□□□ -0.46
CDC42EP4-203ENST00000578516 DNAL4O96015 105 aa12.14□□□□□ -0.47
CDC42EP4-203ENST00000578516 LST1O00453 97 aa12.13□□□□□ -0.47
CDC42EP4-203ENST00000578516 TPRXLQ17RH7 258 aa12.12□□□□□ -0.47
CDC42EP4-203ENST00000578516 Q6JHZ5 121 aa12.12□□□□□ -0.47
CDC42EP4-203ENST00000578516 ORMDL1Q9P0S3 153 aa12.12□□□□□ -0.47
CDC42EP4-203ENST00000578516 KRTAP13-3Q3SY46 172 aa12.1□□□□□ -0.47
CDC42EP4-203ENST00000578516 TCL1BO95988 128 aa12.08□□□□□ -0.48
CDC42EP4-203ENST00000578516 TRACP01848 142 aa12.08□□□□□ -0.48
CDC42EP4-203ENST00000578516 TRBV7-7A0A0K0K1E9 115 aa12.07□□□□□ -0.48
CDC42EP4-203ENST00000578516 H3BMG7 143 aa12.07□□□□□ -0.48
CDC42EP4-203ENST00000578516 CDIP1Q9H305 208 aa12.07□□□□□ -0.48
CDC42EP4-203ENST00000578516 C1orf195Q5TG92 126 aa12.06□□□□□ -0.48
CDC42EP4-203ENST00000578516 Q5XG85 94 aa12.04□□□□□ -0.48
CDC42EP4-203ENST00000578516 TAX1BP3O14907 124 aa12.03□□□□□ -0.48
CDC42EP4-203ENST00000578516 A0A1W2PNM2 257 aa11.99□□□□□ -0.49
CDC42EP4-203ENST00000578516 TMEM256-PLSCR3K7ERE1 68 aa11.99□□□□□ -0.49
CDC42EP4-203ENST00000578516 GHRHP01286 108 aa11.99□□□□□ -0.49
CDC42EP4-203ENST00000578516 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
CDC42EP4-203ENST00000578516 RNF213Q63HN8 5207 aa11.98□□□□□ -0.49
CDC42EP4-203ENST00000578516 C9orf92A6NGG3 77 aa11.97□□□□□ -0.49
CDC42EP4-203ENST00000578516 C9orf118A6NHY6 69 aa11.97□□□□□ -0.49
CDC42EP4-203ENST00000578516 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
CDC42EP4-203ENST00000578516 UBE2V1Q13404 147 aa11.96□□□□□ -0.49
CDC42EP4-203ENST00000578516 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
CDC42EP4-203ENST00000578516 A0A087WSZ3 146 aa11.94□□□□□ -0.5
CDC42EP4-203ENST00000578516 Q6Q795 121 aa11.94□□□□□ -0.5
CDC42EP4-203ENST00000578516 PCP4L1A6NKN8 68 aa11.93□□□□□ -0.5
CDC42EP4-203ENST00000578516 H3BQ85 93 aa11.93□□□□□ -0.5
CDC42EP4-203ENST00000578516 TEN1Q86WV5 123 aa11.93□□□□□ -0.5
CDC42EP4-203ENST00000578516 ANKRD29Q8N6D5 301 aa11.93□□□□□ -0.5
CDC42EP4-203ENST00000578516 ASB16-AS1Q495Z4 193 aa11.91□□□□□ -0.5
CDC42EP4-203ENST00000578516 XP32Q5T750 250 aa11.91□□□□□ -0.5
CDC42EP4-203ENST00000578516 A0A1W2PPM0 123 aa11.9□□□□□ -0.5
CDC42EP4-203ENST00000578516 LYRM7Q5U5X0 104 aa11.9□□□□□ -0.5
CDC42EP4-203ENST00000578516 MTURNQ8N3F0 131 aa11.9□□□□□ -0.5
CDC42EP4-203ENST00000578516 C9JAW5 83 aa11.89□□□□□ -0.51
CDC42EP4-203ENST00000578516 TRBV7-4A0A0J9YYF1 115 aa11.87□□□□□ -0.51
CDC42EP4-203ENST00000578516 TRBV20-1A0A075B6N2 111 aa11.85□□□□□ -0.51
CDC42EP4-203ENST00000578516 CCKP06307 115 aa11.85□□□□□ -0.51
CDC42EP4-203ENST00000578516 VPS25Q9BRG1 176 aa11.85□□□□□ -0.51
CDC42EP4-203ENST00000578516 RBM3P98179 157 aaKnown RBP11.84□□□□□ -0.51
CDC42EP4-203ENST00000578516 Q96NJ1 140 aa11.84□□□□□ -0.51
CDC42EP4-203ENST00000578516 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
CDC42EP4-203ENST00000578516 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
CDC42EP4-203ENST00000578516 DSCR8Q96T75 97 aa11.79□□□□□ -0.52
CDC42EP4-203ENST00000578516 SPCS1Q9Y6A9 102 aa11.78□□□□□ -0.52
CDC42EP4-203ENST00000578516 KRTAP4-1Q9BYQ7 146 aa11.77□□□□□ -0.53
CDC42EP4-203ENST00000578516 C14orf132Q9NPU4 83 aa11.76□□□□□ -0.53
CDC42EP4-203ENST00000578516 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
CDC42EP4-203ENST00000578516 Q6ZQT0 140 aa11.73□□□□□ -0.53
CDC42EP4-203ENST00000578516 SIGMAR1Q99720 223 aa11.73□□□□□ -0.53
CDC42EP4-203ENST00000578516 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.53
CDC42EP4-203ENST00000578516 JMJD7-PLA2G4BH0Y9G9 81 aa11.7□□□□□ -0.54
CDC42EP4-203ENST00000578516 H3BT86 120 aa11.7□□□□□ -0.54
CDC42EP4-203ENST00000578516 SEC61BP60468 96 aaKnown RBP11.7□□□□□ -0.54
CDC42EP4-203ENST00000578516 LOC110117498A0A087WWA1 95 aa11.69□□□□□ -0.54
CDC42EP4-203ENST00000578516 PCOTHQ58A44 107 aa11.69□□□□□ -0.54
CDC42EP4-203ENST00000578516 IGKV4-1P06312 121 aa11.68□□□□□ -0.54
CDC42EP4-203ENST00000578516 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
CDC42EP4-203ENST00000578516 LINC00472Q9H8W2 130 aa11.68□□□□□ -0.54
CDC42EP4-203ENST00000578516 MUC2Q02817 5179 aa11.68□□□□□ -0.54
CDC42EP4-203ENST00000578516 K7EP34 96 aa11.65□□□□□ -0.54
CDC42EP4-203ENST00000578516 DSCR10P59022 87 aa11.65□□□□□ -0.54
CDC42EP4-203ENST00000578516 RPL37P61927 97 aaKnown RBP11.64□□□□□ -0.55
CDC42EP4-203ENST00000578516 PRO0461Q9UI25 63 aa11.62□□□□□ -0.55
CDC42EP4-203ENST00000578516 NOTCH2NLQ7Z3S9 236 aa11.6□□□□□ -0.55
CDC42EP4-203ENST00000578516 PDE6GP18545 87 aa11.56□□□□□ -0.56
CDC42EP4-203ENST00000578516 IGHV6-1A0A0B4J1U7 121 aa11.53□□□□□ -0.56
CDC42EP4-203ENST00000578516 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
CDC42EP4-203ENST00000578516 Q75L30 129 aa11.51□□□□□ -0.57
CDC42EP4-203ENST00000578516 FAT4Q6V0I7 4981 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms