RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 LRRK2Q5S007 2527 aa2.41□□□□□ -2.02
CDH8-205ENST00000577730 MYO18BQ8IUG5 2567 aa2.41□□□□□ -2.02
CDH8-205ENST00000577730 RPS29P62273 56 aaKnown RBP2.4□□□□□ -2.02
CDH8-205ENST00000577730 F8P00451 2351 aa2.4□□□□□ -2.03
CDH8-205ENST00000577730 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
CDH8-205ENST00000577730 IGF2RP11717 2491 aa2.39□□□□□ -2.03
CDH8-205ENST00000577730 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
CDH8-205ENST00000577730 KRTAP13-2Q52LG2 175 aa2.38□□□□□ -2.03
CDH8-205ENST00000577730 ABCA12Q86UK0 2595 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 TNP1P09430 55 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 JMJD1CQ15652 2540 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 KRTAP15-1Q3LI76 137 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 BDP1A6H8Y1 2624 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 TTC28Q96AY4 2481 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 USP9YO00507 2555 aaPredicted RBP2.37□□□□□ -2.03
CDH8-205ENST00000577730 KRTAP10-8P60410 259 aa2.37□□□□□ -2.03
CDH8-205ENST00000577730 DOPEY1Q5JWR5 2465 aa2.36□□□□□ -2.03
CDH8-205ENST00000577730 ACANP16112 2415 aa2.36□□□□□ -2.03
CDH8-205ENST00000577730 SETD2Q9BYW2 2564 aaPredicted RBP2.36□□□□□ -2.03
CDH8-205ENST00000577730 MTORP42345 2549 aa2.34□□□□□ -2.03
CDH8-205ENST00000577730 CHD8Q9HCK8 2581 aa2.34□□□□□ -2.03
CDH8-205ENST00000577730 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
CDH8-205ENST00000577730 FLG2Q5D862 2391 aaPredicted RBP2.33□□□□□ -2.04
CDH8-205ENST00000577730 MUC6Q6W4X9 2439 aa2.32□□□□□ -2.04
CDH8-205ENST00000577730 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
CDH8-205ENST00000577730 ZFYVE26Q68DK2 2539 aa2.32□□□□□ -2.04
CDH8-205ENST00000577730 PIEZO1Q92508 2521 aa2.32□□□□□ -2.04
CDH8-205ENST00000577730 ANKRD17O75179 2603 aaKnown RBP2.31□□□□□ -2.04
CDH8-205ENST00000577730 CEP295Q9C0D2 2601 aa2.31□□□□□ -2.04
CDH8-205ENST00000577730 KRTAP10-2P60368 255 aa2.3□□□□□ -2.04
CDH8-205ENST00000577730 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
CDH8-205ENST00000577730 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
CDH8-205ENST00000577730 POLQO75417 2590 aa2.28□□□□□ -2.04
CDH8-205ENST00000577730 INE1O15225 51 aa2.28□□□□□ -2.04
CDH8-205ENST00000577730 BPTFQ12830 3046 aa2.28□□□□□ -2.04
CDH8-205ENST00000577730 WDR87Q6ZQQ6 2873 aa2.27□□□□□ -2.05
CDH8-205ENST00000577730 KIAA1109Q2LD37 5005 aa2.27□□□□□ -2.05
CDH8-205ENST00000577730 EPPK1P58107 5090 aaKnown RBP2.26□□□□□ -2.05
CDH8-205ENST00000577730 M0R2T5 61 aa2.26□□□□□ -2.05
CDH8-205ENST00000577730 SPTBN4Q9H254 2564 aa2.25□□□□□ -2.05
CDH8-205ENST00000577730 EPG5Q9HCE0 2579 aa2.25□□□□□ -2.05
CDH8-205ENST00000577730 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
CDH8-205ENST00000577730 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
CDH8-205ENST00000577730 XP32Q5T750 250 aa2.23□□□□□ -2.05
CDH8-205ENST00000577730 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
CDH8-205ENST00000577730 KRTAP1-4P0C5Y4 121 aa2.23□□□□□ -2.05
CDH8-205ENST00000577730 ANKRD11Q6UB99 2663 aaPredicted RBP2.22□□□□□ -2.05
CDH8-205ENST00000577730 HYDINQ4G0P3 5121 aa2.21□□□□□ -2.06
CDH8-205ENST00000577730 FASNP49327 2511 aaKnown RBP2.2□□□□□ -2.06
CDH8-205ENST00000577730 Q5VSD8 79 aa2.2□□□□□ -2.06
CDH8-205ENST00000577730 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
CDH8-205ENST00000577730 KRTAP3-1Q9BYR8 98 aa2.19□□□□□ -2.06
CDH8-205ENST00000577730 KRTAP10-6P60371 365 aaPredicted RBP2.18□□□□□ -2.06
CDH8-205ENST00000577730 UNC79Q9P2D8 2635 aa2.18□□□□□ -2.06
CDH8-205ENST00000577730 ABCA13Q86UQ4 5058 aa2.16□□□□□ -2.06
CDH8-205ENST00000577730 STAB2Q8WWQ8 2551 aa2.16□□□□□ -2.06
CDH8-205ENST00000577730 GCN1Q92616 2671 aaKnown RBP2.14□□□□□ -2.07
CDH8-205ENST00000577730 RYR3Q15413 4870 aa2.14□□□□□ -2.07
CDH8-205ENST00000577730 PRRC2CQ9Y520 2896 aaKnown RBP2.14□□□□□ -2.07
CDH8-205ENST00000577730 BAHCC1Q9P281 2608 aa2.13□□□□□ -2.07
CDH8-205ENST00000577730 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
CDH8-205ENST00000577730 SRCAPQ6ZRS2 3230 aa2.12□□□□□ -2.07
CDH8-205ENST00000577730 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
CDH8-205ENST00000577730 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
CDH8-205ENST00000577730 CENPEQ02224 2701 aa2.12□□□□□ -2.07
CDH8-205ENST00000577730 HELZ2Q9BYK8 2649 aaKnown RBP2.11□□□□□ -2.07
CDH8-205ENST00000577730 UBR4Q5T4S7 5183 aa2.11□□□□□ -2.07
CDH8-205ENST00000577730 CENPFP49454 3210 aa2.1□□□□□ -2.07
CDH8-205ENST00000577730 MGAM2Q2M2H8 2515 aa2.1□□□□□ -2.07
CDH8-205ENST00000577730 KMT2DO14686 5537 aa2.1□□□□□ -2.07
CDH8-205ENST00000577730 KRTAP3-2Q9BYR7 98 aa2.1□□□□□ -2.07
CDH8-205ENST00000577730 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CDH8-205ENST00000577730 FLNAP21333 2647 aaKnown RBP2.09□□□□□ -2.07
CDH8-205ENST00000577730 KRTAP23-1A1A580 65 aa2.09□□□□□ -2.08
CDH8-205ENST00000577730 ATRQ13535 2644 aa2.08□□□□□ -2.08
CDH8-205ENST00000577730 NBEAL2Q6ZNJ1 2754 aa2.07□□□□□ -2.08
CDH8-205ENST00000577730 HECTD1Q9ULT8 2610 aa2.06□□□□□ -2.08
CDH8-205ENST00000577730 STAB1Q9NY15 2570 aa2.06□□□□□ -2.08
CDH8-205ENST00000577730 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
CDH8-205ENST00000577730 A0A0C4DFX4 3053 aa2.05□□□□□ -2.08
CDH8-205ENST00000577730 ITPR1Q14643 2758 aa2.04□□□□□ -2.08
CDH8-205ENST00000577730 NOTCH1P46531 2555 aa2.04□□□□□ -2.08
CDH8-205ENST00000577730 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
CDH8-205ENST00000577730 A0A1B0GVY2 172 aa2.04□□□□□ -2.08
CDH8-205ENST00000577730 USP24Q9UPU5 2620 aa2.04□□□□□ -2.08
CDH8-205ENST00000577730 CHD6Q8TD26 2715 aa2.04□□□□□ -2.08
CDH8-205ENST00000577730 KRTAP3-3Q9BYR6 98 aa2.03□□□□□ -2.08
CDH8-205ENST00000577730 UBR5O95071 2799 aaPredicted RBP2.02□□□□□ -2.09
CDH8-205ENST00000577730 ITPR3Q14573 2671 aa2.02□□□□□ -2.09
CDH8-205ENST00000577730 KRTAP21-3Q3LHN1 58 aa2.02□□□□□ -2.09
CDH8-205ENST00000577730 MAP1AP78559 2803 aaPredicted RBP2.01□□□□□ -2.09
CDH8-205ENST00000577730 TEP1Q99973 2627 aaKnown RBP2□□□□□ -2.09
CDH8-205ENST00000577730 COL6A5A8TX70 2615 aa1.99□□□□□ -2.09
CDH8-205ENST00000577730 MAST4O15021 2626 aa1.99□□□□□ -2.09
CDH8-205ENST00000577730 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
CDH8-205ENST00000577730 SETXQ7Z333 2677 aaKnown RBP1.98□□□□□ -2.09
CDH8-205ENST00000577730 CFAP46Q8IYW2 2715 aa1.98□□□□□ -2.09
CDH8-205ENST00000577730 TGP01266 2768 aa1.96□□□□□ -2.09
CDH8-205ENST00000577730 NSD1Q96L73 2696 aaPredicted RBP1.96□□□□□ -2.1
CDH8-205ENST00000577730 KRTAP10-10P60014 251 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms