RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 LAMTOR3Q9UHA4 124 aa3.95□□□□□ -1.78
SMG6-209ENST00000571442 SLC25A20O43772 301 aa3.94□□□□□ -1.78
SMG6-209ENST00000571442 CLEC2BQ92478 149 aa3.94□□□□□ -1.78
SMG6-209ENST00000571442 SPINK1P00995 79 aa3.93□□□□□ -1.78
SMG6-209ENST00000571442 C4orf48Q5BLP8 95 aa3.93□□□□□ -1.78
SMG6-209ENST00000571442 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.93□□□□□ -1.78
SMG6-209ENST00000571442 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
SMG6-209ENST00000571442 H0YGX0 51 aa3.92□□□□□ -1.78
SMG6-209ENST00000571442 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
SMG6-209ENST00000571442 IGLV8-61A0A075B6I0 122 aa3.91□□□□□ -1.78
SMG6-209ENST00000571442 H3BUT2 72 aa3.91□□□□□ -1.78
SMG6-209ENST00000571442 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
SMG6-209ENST00000571442 NAA38Q9BRA0 125 aaKnown RBP3.91□□□□□ -1.78
SMG6-209ENST00000571442 PSMB2P49721 201 aa3.89□□□□□ -1.79
SMG6-209ENST00000571442 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
SMG6-209ENST00000571442 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
SMG6-209ENST00000571442 OCIAD2Q56VL3 154 aa3.89□□□□□ -1.79
SMG6-209ENST00000571442 MUC2Q02817 5179 aa3.88□□□□□ -1.79
SMG6-209ENST00000571442 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
SMG6-209ENST00000571442 A0A1B0GX51 115 aa3.88□□□□□ -1.79
SMG6-209ENST00000571442 TSTD3H0UI37 97 aa3.88□□□□□ -1.79
SMG6-209ENST00000571442 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
SMG6-209ENST00000571442 CD164Q04900 197 aa3.88□□□□□ -1.79
SMG6-209ENST00000571442 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
SMG6-209ENST00000571442 PPDPFLQ8WWR9 84 aa3.88□□□□□ -1.79
SMG6-209ENST00000571442 F8WEM9 126 aa3.87□□□□□ -1.79
SMG6-209ENST00000571442 M0R143 59 aa3.87□□□□□ -1.79
SMG6-209ENST00000571442 C1orf195Q5TG92 126 aa3.87□□□□□ -1.79
SMG6-209ENST00000571442 Q5XG85 94 aa3.87□□□□□ -1.79
SMG6-209ENST00000571442 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
SMG6-209ENST00000571442 TRBV7-7A0A0K0K1E9 115 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 A0A1B0GV72 72 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 LST1O00453 97 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 TCL1BO95988 128 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 FABP2P12104 132 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 BATFQ16520 125 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 LIMD2Q9BT23 127 aa3.86□□□□□ -1.79
SMG6-209ENST00000571442 TRACP01848 142 aa3.85□□□□□ -1.79
SMG6-209ENST00000571442 COX6CP09669 75 aa3.85□□□□□ -1.79
SMG6-209ENST00000571442 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
SMG6-209ENST00000571442 Q6JHZ5 121 aa3.85□□□□□ -1.79
SMG6-209ENST00000571442 CDIP1Q9H305 208 aa3.85□□□□□ -1.79
SMG6-209ENST00000571442 ORMDL1Q9P0S3 153 aa3.85□□□□□ -1.79
SMG6-209ENST00000571442 A0A1W2PNM2 257 aa3.84□□□□□ -1.79
SMG6-209ENST00000571442 H3BMG7 143 aa3.84□□□□□ -1.79
SMG6-209ENST00000571442 TAX1BP3O14907 124 aa3.84□□□□□ -1.79
SMG6-209ENST00000571442 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
SMG6-209ENST00000571442 SNCGO76070 127 aa3.83□□□□□ -1.8
SMG6-209ENST00000571442 DNAL4O96015 105 aa3.83□□□□□ -1.8
SMG6-209ENST00000571442 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
SMG6-209ENST00000571442 XP32Q5T750 250 aa3.82□□□□□ -1.8
SMG6-209ENST00000571442 Q6Q795 121 aa3.82□□□□□ -1.8
SMG6-209ENST00000571442 C9orf118A6NHY6 69 aa3.81□□□□□ -1.8
SMG6-209ENST00000571442 TMEM256-PLSCR3K7ERE1 68 aa3.81□□□□□ -1.8
SMG6-209ENST00000571442 BAALC-AS2P0C853 105 aa3.81□□□□□ -1.8
SMG6-209ENST00000571442 UBE2V1Q13404 147 aa3.81□□□□□ -1.8
SMG6-209ENST00000571442 ASB16-AS1Q495Z4 193 aa3.81□□□□□ -1.8
SMG6-209ENST00000571442 Q96NJ1 140 aa3.81□□□□□ -1.8
SMG6-209ENST00000571442 A0A087WSZ3 146 aa3.8□□□□□ -1.8
SMG6-209ENST00000571442 ATXN8Q156A1 80 aa3.8□□□□□ -1.8
SMG6-209ENST00000571442 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
SMG6-209ENST00000571442 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
SMG6-209ENST00000571442 MTURNQ8N3F0 131 aa3.79□□□□□ -1.8
SMG6-209ENST00000571442 ANKRD29Q8N6D5 301 aa3.79□□□□□ -1.8
SMG6-209ENST00000571442 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
SMG6-209ENST00000571442 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
SMG6-209ENST00000571442 A0A1W2PPM0 123 aa3.78□□□□□ -1.8
SMG6-209ENST00000571442 GHRHP01286 108 aa3.78□□□□□ -1.8
SMG6-209ENST00000571442 C9JAW5 83 aa3.77□□□□□ -1.81
SMG6-209ENST00000571442 H3BQ85 93 aa3.77□□□□□ -1.81
SMG6-209ENST00000571442 CCKP06307 115 aa3.77□□□□□ -1.81
SMG6-209ENST00000571442 PCP4L1A6NKN8 68 aa3.76□□□□□ -1.81
SMG6-209ENST00000571442 RBM3P98179 157 aaKnown RBP3.76□□□□□ -1.81
SMG6-209ENST00000571442 TRBV20-1A0A075B6N2 111 aa3.75□□□□□ -1.81
SMG6-209ENST00000571442 DEFB116Q30KQ4 102 aa3.75□□□□□ -1.81
SMG6-209ENST00000571442 PCOTHQ58A44 107 aa3.75□□□□□ -1.81
SMG6-209ENST00000571442 OBSCN-AS1Q96MR7 158 aa3.75□□□□□ -1.81
SMG6-209ENST00000571442 VPS25Q9BRG1 176 aa3.75□□□□□ -1.81
SMG6-209ENST00000571442 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
SMG6-209ENST00000571442 SMCPP49901 116 aaPredicted RBP3.74□□□□□ -1.81
SMG6-209ENST00000571442 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
SMG6-209ENST00000571442 LYRM7Q5U5X0 104 aa3.74□□□□□ -1.81
SMG6-209ENST00000571442 Q6ZQT0 140 aa3.74□□□□□ -1.81
SMG6-209ENST00000571442 DSCR8Q96T75 97 aa3.74□□□□□ -1.81
SMG6-209ENST00000571442 C14orf132Q9NPU4 83 aa3.74□□□□□ -1.81
SMG6-209ENST00000571442 SS18L2Q9UHA2 77 aa3.74□□□□□ -1.81
SMG6-209ENST00000571442 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
SMG6-209ENST00000571442 RPL37P61927 97 aaKnown RBP3.73□□□□□ -1.81
SMG6-209ENST00000571442 COL5A1-AS1Q5SY13 56 aa3.73□□□□□ -1.81
SMG6-209ENST00000571442 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
SMG6-209ENST00000571442 SPCS1Q9Y6A9 102 aa3.73□□□□□ -1.81
SMG6-209ENST00000571442 LOC110117498A0A087WWA1 95 aa3.72□□□□□ -1.81
SMG6-209ENST00000571442 DSCR10P59022 87 aa3.72□□□□□ -1.81
SMG6-209ENST00000571442 PRO0461Q9UI25 63 aa3.72□□□□□ -1.81
SMG6-209ENST00000571442 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
SMG6-209ENST00000571442 H3BT86 120 aa3.71□□□□□ -1.82
SMG6-209ENST00000571442 IGKV4-1P06312 121 aa3.71□□□□□ -1.82
SMG6-209ENST00000571442 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
SMG6-209ENST00000571442 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
SMG6-209ENST00000571442 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms