RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 SCGB3A1Q96QR1 104 aa3.15□□□□□ -1.91
GDE1-204ENST00000569773 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 M0R378 163 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 LST1O00453 97 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 IGLC3P0DOY3 106 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 LINC00313P59037 77 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 PRLHP81277 87 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 SNHG12Q9BXW3 62 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 SND1-IT1Q9HBX3 110 aa3.14□□□□□ -1.91
GDE1-204ENST00000569773 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 A8MUN3 132 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 ZNF22P17026 224 aaPredicted RBP3.13□□□□□ -1.91
GDE1-204ENST00000569773 UBE2AP49459 152 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 NDUFA6P56556 154 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 CLLU1Q5K131 121 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 Q5XG85 94 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 C3orf22Q8N5N4 141 aa3.13□□□□□ -1.91
GDE1-204ENST00000569773 NAA38Q9BRA0 125 aaKnown RBP3.13□□□□□ -1.91
GDE1-204ENST00000569773 TRGC2P03986 189 aa3.12□□□□□ -1.91
GDE1-204ENST00000569773 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
GDE1-204ENST00000569773 COX17Q14061 63 aa3.12□□□□□ -1.91
GDE1-204ENST00000569773 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
GDE1-204ENST00000569773 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
GDE1-204ENST00000569773 ZNF625Q96I27 306 aaPredicted RBP3.12□□□□□ -1.91
GDE1-204ENST00000569773 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
GDE1-204ENST00000569773 IGKV2D-26A0A0A0MRZ7 120 aa3.11□□□□□ -1.91
GDE1-204ENST00000569773 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
GDE1-204ENST00000569773 TAX1BP3O14907 124 aa3.11□□□□□ -1.91
GDE1-204ENST00000569773 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
GDE1-204ENST00000569773 MEIG1Q5JSS6 88 aa3.11□□□□□ -1.91
GDE1-204ENST00000569773 BRK1Q8WUW1 75 aa3.11□□□□□ -1.91
GDE1-204ENST00000569773 A0A0J9YXY3 114 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 C11orf86A6NJI1 115 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 H3BRM9 83 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 FABP2P12104 132 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 SPRR1AP35321 89 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 HSD52Q0P140 79 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 SLC25A34Q6PIV7 304 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 LCA10Q71F78 164 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 C18orf32Q8TCD1 76 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 SPRR4Q96PI1 79 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 SEC11CQ9BY50 192 aa3.1□□□□□ -1.91
GDE1-204ENST00000569773 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
GDE1-204ENST00000569773 ZNF73O43830 326 aaPredicted RBP3.09□□□□□ -1.91
GDE1-204ENST00000569773 LGALS3P17931 250 aaKnown RBP3.09□□□□□ -1.91
GDE1-204ENST00000569773 ASB16-AS1Q495Z4 193 aa3.09□□□□□ -1.91
GDE1-204ENST00000569773 SPAG11AQ6PDA7 123 aa3.09□□□□□ -1.91
GDE1-204ENST00000569773 FP248Q71RG6 208 aaPredicted RBP3.09□□□□□ -1.91
GDE1-204ENST00000569773 HBDP02042 147 aa3.08□□□□□ -1.92
GDE1-204ENST00000569773 PMCHL1Q16048 86 aa3.08□□□□□ -1.92
GDE1-204ENST00000569773 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
GDE1-204ENST00000569773 SFTA2Q6UW10 78 aa3.08□□□□□ -1.92
GDE1-204ENST00000569773 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
GDE1-204ENST00000569773 SMCO4Q9NRQ5 59 aa3.08□□□□□ -1.92
GDE1-204ENST00000569773 FAM236AA0A1B0GUQ0 79 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 FAM236BA0A1B0GV22 79 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 TMEM223A0PJW6 202 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BOP23527 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BBP33778 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BDP58876 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BCP62807 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST2H2BEQ16778 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.07□□□□□ -1.92
GDE1-204ENST00000569773 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 DAND5Q8N907 189 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 SMCR5Q8TEV8 140 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BHQ93079 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BNQ99877 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 HIST1H2BMQ99879 126 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 MIEN1Q9BRT3 115 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 KCNQ1DNQ9H478 68 aa3.07□□□□□ -1.92
GDE1-204ENST00000569773 TRAV12-1A0A0B4J245 112 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 LOC107984156A0A0G2JMH3 177 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 TRBV7-6A0A0J9YX20 115 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 H3BMG7 143 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 SMIM13P0DJ93 91 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 TMEM170BQ5T4T1 132 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 ARL17AQ8IVW1 177 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 PRO1933Q9H354 126 aa3.06□□□□□ -1.92
GDE1-204ENST00000569773 TRBV10-3A0A0K0K1G6 114 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 TMEM256-PLSCR3K7ERE1 68 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 ERC2-IT1O76042 136 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 SPINK1P00995 79 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 LINC00158P58513 81 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 RPS29P62273 56 aaKnown RBP3.05□□□□□ -1.92
GDE1-204ENST00000569773 MIR7-3HGQ8N6C7 128 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 Q9BRP9 147 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 SPANXDQ9BXN6 97 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 TRAPPC1Q9Y5R8 145 aa3.05□□□□□ -1.92
GDE1-204ENST00000569773 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
GDE1-204ENST00000569773 NCR3O14931 201 aa3.04□□□□□ -1.92
GDE1-204ENST00000569773 TSPEAR-AS2P59090 65 aa3.04□□□□□ -1.92
GDE1-204ENST00000569773 PYY3Q5JQD4 70 aa3.04□□□□□ -1.92
GDE1-204ENST00000569773 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
GDE1-204ENST00000569773 SVBPQ8N300 66 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms