RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 hADV29S1A0JD25 119 aa5.39□□□□□ -1.55
SMPD3-207ENST00000566466 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
SMPD3-207ENST00000566466 H0YGX0 51 aa5.39□□□□□ -1.55
SMPD3-207ENST00000566466 LST1O00453 97 aa5.39□□□□□ -1.55
SMPD3-207ENST00000566466 TCL1BO95988 128 aa5.38□□□□□ -1.55
SMPD3-207ENST00000566466 ZNF706Q9Y5V0 76 aaPredicted RBP5.38□□□□□ -1.55
SMPD3-207ENST00000566466 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
SMPD3-207ENST00000566466 A0A1B0GX51 115 aa5.37□□□□□ -1.55
SMPD3-207ENST00000566466 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
SMPD3-207ENST00000566466 PSMB2P49721 201 aa5.37□□□□□ -1.55
SMPD3-207ENST00000566466 VAMP3Q15836 100 aa5.37□□□□□ -1.55
SMPD3-207ENST00000566466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.37□□□□□ -1.55
SMPD3-207ENST00000566466 H3BUT2 72 aa5.36□□□□□ -1.55
SMPD3-207ENST00000566466 CRYGAP11844 174 aa5.36□□□□□ -1.55
SMPD3-207ENST00000566466 KRTAP9-2Q9BYQ4 174 aa5.36□□□□□ -1.55
SMPD3-207ENST00000566466 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
SMPD3-207ENST00000566466 TEX49A0A1B0GTD5 131 aa5.35□□□□□ -1.55
SMPD3-207ENST00000566466 A0A1W2PPM0 123 aa5.35□□□□□ -1.55
SMPD3-207ENST00000566466 TRACP01848 142 aa5.35□□□□□ -1.55
SMPD3-207ENST00000566466 DEFB105AQ8NG35 78 aa5.35□□□□□ -1.55
SMPD3-207ENST00000566466 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
SMPD3-207ENST00000566466 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
SMPD3-207ENST00000566466 SLC25A20O43772 301 aa5.34□□□□□ -1.55
SMPD3-207ENST00000566466 MOBPQ13875 183 aa5.34□□□□□ -1.55
SMPD3-207ENST00000566466 COL5A1-AS1Q5SY13 56 aa5.34□□□□□ -1.55
SMPD3-207ENST00000566466 IGLV8-61A0A075B6I0 122 aa5.33□□□□□ -1.56
SMPD3-207ENST00000566466 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
SMPD3-207ENST00000566466 IGLV9-49A0A0B4J1Y8 123 aa5.32□□□□□ -1.56
SMPD3-207ENST00000566466 COX6CP09669 75 aa5.31□□□□□ -1.56
SMPD3-207ENST00000566466 Q8NBF4 154 aa5.31□□□□□ -1.56
SMPD3-207ENST00000566466 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
SMPD3-207ENST00000566466 SCGB1C2P0DMR2 95 aa5.3□□□□□ -1.56
SMPD3-207ENST00000566466 ATXN8Q156A1 80 aa5.29□□□□□ -1.56
SMPD3-207ENST00000566466 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
SMPD3-207ENST00000566466 SSBP3-AS1Q7Z2R9 100 aa5.29□□□□□ -1.56
SMPD3-207ENST00000566466 LINC00304Q8N9R0 145 aa5.29□□□□□ -1.56
SMPD3-207ENST00000566466 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
SMPD3-207ENST00000566466 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
SMPD3-207ENST00000566466 NDUFV3P56181 108 aaKnown RBP5.28□□□□□ -1.56
SMPD3-207ENST00000566466 C9orf153Q5TBE3 101 aa5.28□□□□□ -1.56
SMPD3-207ENST00000566466 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
SMPD3-207ENST00000566466 ORMDL1Q9P0S3 153 aa5.28□□□□□ -1.56
SMPD3-207ENST00000566466 PRO0461Q9UI25 63 aa5.28□□□□□ -1.56
SMPD3-207ENST00000566466 H3BMG7 143 aa5.27□□□□□ -1.57
SMPD3-207ENST00000566466 K7EP34 96 aa5.27□□□□□ -1.57
SMPD3-207ENST00000566466 FABP2P12104 132 aa5.27□□□□□ -1.57
SMPD3-207ENST00000566466 MTURNQ8N3F0 131 aa5.27□□□□□ -1.57
SMPD3-207ENST00000566466 DNAL4O96015 105 aa5.26□□□□□ -1.57
SMPD3-207ENST00000566466 SPCS1Q9Y6A9 102 aa5.26□□□□□ -1.57
SMPD3-207ENST00000566466 C9JAW5 83 aa5.25□□□□□ -1.57
SMPD3-207ENST00000566466 BAALC-AS2P0C853 105 aa5.25□□□□□ -1.57
SMPD3-207ENST00000566466 UBE2V1Q13404 147 aa5.25□□□□□ -1.57
SMPD3-207ENST00000566466 LYRM7Q5U5X0 104 aa5.25□□□□□ -1.57
SMPD3-207ENST00000566466 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
SMPD3-207ENST00000566466 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
SMPD3-207ENST00000566466 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
SMPD3-207ENST00000566466 A0A1B0GV72 72 aa5.23□□□□□ -1.57
SMPD3-207ENST00000566466 A0A1W2PNM2 257 aa5.23□□□□□ -1.57
SMPD3-207ENST00000566466 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
SMPD3-207ENST00000566466 CD164Q04900 197 aa5.23□□□□□ -1.57
SMPD3-207ENST00000566466 H3BT86 120 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 SNCGO76070 127 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 SPINK1P00995 79 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 Q6JHZ5 121 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 Q6Q795 121 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 HRCT1Q6UXD1 115 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 ANKRD29Q8N6D5 301 aa5.22□□□□□ -1.57
SMPD3-207ENST00000566466 F8WEM9 126 aa5.21□□□□□ -1.58
SMPD3-207ENST00000566466 H3BQ85 93 aa5.21□□□□□ -1.58
SMPD3-207ENST00000566466 Q5XG85 94 aa5.21□□□□□ -1.58
SMPD3-207ENST00000566466 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
SMPD3-207ENST00000566466 RETNLBQ9BQ08 111 aa5.21□□□□□ -1.58
SMPD3-207ENST00000566466 LPAP08519 4548 aa5.2□□□□□ -1.58
SMPD3-207ENST00000566466 TRBV7-7A0A0K0K1E9 115 aa5.2□□□□□ -1.58
SMPD3-207ENST00000566466 A0A1B0GV90 55 aa5.19□□□□□ -1.58
SMPD3-207ENST00000566466 LRP2P98164 4655 aa5.18□□□□□ -1.58
SMPD3-207ENST00000566466 Q6ZQT0 140 aa5.18□□□□□ -1.58
SMPD3-207ENST00000566466 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
SMPD3-207ENST00000566466 LOC110117498A0A087WWA1 95 aa5.17□□□□□ -1.58
SMPD3-207ENST00000566466 Q96NJ1 140 aa5.17□□□□□ -1.58
SMPD3-207ENST00000566466 C14orf132Q9NPU4 83 aa5.17□□□□□ -1.58
SMPD3-207ENST00000566466 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
SMPD3-207ENST00000566466 TEN1Q86WV5 123 aa5.16□□□□□ -1.58
SMPD3-207ENST00000566466 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
SMPD3-207ENST00000566466 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
SMPD3-207ENST00000566466 C1orf195Q5TG92 126 aa5.15□□□□□ -1.59
SMPD3-207ENST00000566466 A0A087WSZ3 146 aa5.14□□□□□ -1.59
SMPD3-207ENST00000566466 JMJD7-PLA2G4BH0Y9G9 81 aa5.14□□□□□ -1.59
SMPD3-207ENST00000566466 GTF2H5Q6ZYL4 71 aa5.14□□□□□ -1.59
SMPD3-207ENST00000566466 CCKP06307 115 aa5.13□□□□□ -1.59
SMPD3-207ENST00000566466 LIMD2Q9BT23 127 aa5.13□□□□□ -1.59
SMPD3-207ENST00000566466 F8W1H4 67 aa5.12□□□□□ -1.59
SMPD3-207ENST00000566466 DSCR8Q96T75 97 aa5.12□□□□□ -1.59
SMPD3-207ENST00000566466 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
SMPD3-207ENST00000566466 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
SMPD3-207ENST00000566466 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
SMPD3-207ENST00000566466 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
SMPD3-207ENST00000566466 PRR4Q16378 134 aa5.1□□□□□ -1.59
SMPD3-207ENST00000566466 ETDBQ3ZM63 59 aa5.1□□□□□ -1.59
SMPD3-207ENST00000566466 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms