RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 LINC01547P58512 204 aaPredicted RBP7.28□□□□□ -1.24
SHCBP1-204ENST00000565887 Q8N377 158 aa7.28□□□□□ -1.24
SHCBP1-204ENST00000565887 F8WEM9 126 aa7.27□□□□□ -1.25
SHCBP1-204ENST00000565887 H3BQ85 93 aa7.27□□□□□ -1.25
SHCBP1-204ENST00000565887 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
SHCBP1-204ENST00000565887 TRIAP1O43715 76 aa7.25□□□□□ -1.25
SHCBP1-204ENST00000565887 CD164Q04900 197 aa7.25□□□□□ -1.25
SHCBP1-204ENST00000565887 PRR4Q16378 134 aa7.25□□□□□ -1.25
SHCBP1-204ENST00000565887 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
SHCBP1-204ENST00000565887 K7ERJ3 54 aa7.23□□□□□ -1.25
SHCBP1-204ENST00000565887 Q6JHZ5 121 aa7.23□□□□□ -1.25
SHCBP1-204ENST00000565887 DNAL4O96015 105 aa7.22□□□□□ -1.25
SHCBP1-204ENST00000565887 SCGB1C2P0DMR2 95 aa7.22□□□□□ -1.25
SHCBP1-204ENST00000565887 IGLV8-61A0A075B6I0 122 aa7.21□□□□□ -1.26
SHCBP1-204ENST00000565887 FP248Q71RG6 208 aaPredicted RBP7.21□□□□□ -1.26
SHCBP1-204ENST00000565887 FAM218AQ96MZ4 157 aa7.21□□□□□ -1.26
SHCBP1-204ENST00000565887 LIMD2Q9BT23 127 aa7.21□□□□□ -1.26
SHCBP1-204ENST00000565887 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
SHCBP1-204ENST00000565887 ORMDL1Q9P0S3 153 aa7.18□□□□□ -1.26
SHCBP1-204ENST00000565887 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
SHCBP1-204ENST00000565887 TRACP01848 142 aa7.17□□□□□ -1.26
SHCBP1-204ENST00000565887 Q5XG85 94 aa7.17□□□□□ -1.26
SHCBP1-204ENST00000565887 CLEC2BQ92478 149 aa7.17□□□□□ -1.26
SHCBP1-204ENST00000565887 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
SHCBP1-204ENST00000565887 FABP2P12104 132 aa7.16□□□□□ -1.26
SHCBP1-204ENST00000565887 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
SHCBP1-204ENST00000565887 LYRM7Q5U5X0 104 aa7.15□□□□□ -1.26
SHCBP1-204ENST00000565887 HRCT1Q6UXD1 115 aa7.15□□□□□ -1.26
SHCBP1-204ENST00000565887 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.26
SHCBP1-204ENST00000565887 LST1O00453 97 aa7.14□□□□□ -1.27
SHCBP1-204ENST00000565887 TCL1BO95988 128 aa7.14□□□□□ -1.27
SHCBP1-204ENST00000565887 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
SHCBP1-204ENST00000565887 H3BMG7 143 aa7.12□□□□□ -1.27
SHCBP1-204ENST00000565887 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
SHCBP1-204ENST00000565887 BATFQ16520 125 aa7.12□□□□□ -1.27
SHCBP1-204ENST00000565887 IGFL1Q6UW32 110 aa7.12□□□□□ -1.27
SHCBP1-204ENST00000565887 TRBV20-1A0A075B6N2 111 aa7.11□□□□□ -1.27
SHCBP1-204ENST00000565887 ATXN8Q156A1 80 aa7.11□□□□□ -1.27
SHCBP1-204ENST00000565887 TRBV7-7A0A0K0K1E9 115 aa7.09□□□□□ -1.27
SHCBP1-204ENST00000565887 Q6Q795 121 aa7.09□□□□□ -1.27
SHCBP1-204ENST00000565887 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
SHCBP1-204ENST00000565887 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
SHCBP1-204ENST00000565887 H3BUT2 72 aa7.08□□□□□ -1.28
SHCBP1-204ENST00000565887 ASB16-AS1Q495Z4 193 aa7.08□□□□□ -1.28
SHCBP1-204ENST00000565887 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
SHCBP1-204ENST00000565887 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
SHCBP1-204ENST00000565887 BAALC-AS2P0C853 105 aa7.07□□□□□ -1.28
SHCBP1-204ENST00000565887 ANKRD29Q8N6D5 301 aa7.07□□□□□ -1.28
SHCBP1-204ENST00000565887 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
SHCBP1-204ENST00000565887 RBM3P98179 157 aaKnown RBP7.04□□□□□ -1.28
SHCBP1-204ENST00000565887 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
SHCBP1-204ENST00000565887 C1orf195Q5TG92 126 aa7.04□□□□□ -1.28
SHCBP1-204ENST00000565887 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
SHCBP1-204ENST00000565887 LRP2P98164 4655 aa7.04□□□□□ -1.28
SHCBP1-204ENST00000565887 TAX1BP3O14907 124 aa7.03□□□□□ -1.28
SHCBP1-204ENST00000565887 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.29
SHCBP1-204ENST00000565887 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
SHCBP1-204ENST00000565887 C21orf62-AS1Q17RA5 79 aa7.02□□□□□ -1.29
SHCBP1-204ENST00000565887 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
SHCBP1-204ENST00000565887 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
SHCBP1-204ENST00000565887 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
SHCBP1-204ENST00000565887 C9JAW5 83 aa6.99□□□□□ -1.29
SHCBP1-204ENST00000565887 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
SHCBP1-204ENST00000565887 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
SHCBP1-204ENST00000565887 CCKP06307 115 aa6.98□□□□□ -1.29
SHCBP1-204ENST00000565887 PDE6GP18545 87 aa6.98□□□□□ -1.29
SHCBP1-204ENST00000565887 A0A087WSZ3 146 aa6.97□□□□□ -1.29
SHCBP1-204ENST00000565887 A0A1B0GW54 56 aa6.97□□□□□ -1.29
SHCBP1-204ENST00000565887 LPAP08519 4548 aa6.97□□□□□ -1.29
SHCBP1-204ENST00000565887 H3BT86 120 aa6.95□□□□□ -1.3
SHCBP1-204ENST00000565887 A0A1B0GV72 72 aa6.94□□□□□ -1.3
SHCBP1-204ENST00000565887 PCP4L1A6NKN8 68 aa6.94□□□□□ -1.3
SHCBP1-204ENST00000565887 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
SHCBP1-204ENST00000565887 LOC110117498A0A087WWA1 95 aa6.93□□□□□ -1.3
SHCBP1-204ENST00000565887 XP32Q5T750 250 aa6.93□□□□□ -1.3
SHCBP1-204ENST00000565887 SPCS1Q9Y6A9 102 aa6.93□□□□□ -1.3
SHCBP1-204ENST00000565887 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
SHCBP1-204ENST00000565887 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
SHCBP1-204ENST00000565887 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
SHCBP1-204ENST00000565887 Q6ZQT0 140 aa6.89□□□□□ -1.31
SHCBP1-204ENST00000565887 GTF2H5Q6ZYL4 71 aa6.88□□□□□ -1.31
SHCBP1-204ENST00000565887 Q96NJ1 140 aa6.87□□□□□ -1.31
SHCBP1-204ENST00000565887 J3KT08 172 aa6.86□□□□□ -1.31
SHCBP1-204ENST00000565887 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
SHCBP1-204ENST00000565887 LINC00472Q9H8W2 130 aa6.86□□□□□ -1.31
SHCBP1-204ENST00000565887 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
SHCBP1-204ENST00000565887 K7EP34 96 aa6.85□□□□□ -1.31
SHCBP1-204ENST00000565887 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
SHCBP1-204ENST00000565887 A0A0U1RQV1 116 aa6.84□□□□□ -1.31
SHCBP1-204ENST00000565887 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
SHCBP1-204ENST00000565887 MTURNQ8N3F0 131 aa6.82□□□□□ -1.32
SHCBP1-204ENST00000565887 F8W1H4 67 aa6.81□□□□□ -1.32
SHCBP1-204ENST00000565887 LINC00313P59037 77 aa6.81□□□□□ -1.32
SHCBP1-204ENST00000565887 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
SHCBP1-204ENST00000565887 NREPQ16612 68 aa6.8□□□□□ -1.32
SHCBP1-204ENST00000565887 NDUFB1O75438 58 aa6.79□□□□□ -1.32
SHCBP1-204ENST00000565887 Q75L30 129 aa6.79□□□□□ -1.32
SHCBP1-204ENST00000565887 PRO0461Q9UI25 63 aa6.79□□□□□ -1.32
SHCBP1-204ENST00000565887 SMCPP49901 116 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-204ENST00000565887 DEFB116Q30KQ4 102 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms