RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 M0QY20 66 aa2.8□□□□□ -1.96
SMG1-207ENST00000563235 SPINK14Q6IE38 97 aa2.8□□□□□ -1.96
SMG1-207ENST00000563235 FREM1Q5H8C1 2179 aa2.8□□□□□ -1.96
SMG1-207ENST00000563235 A0A087WTM6 91 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 MGPP08493 103 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 KRTAP10-9P60411 292 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 IGKV2-28A0A075B6P5 120 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 NCR3O14931 201 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 IGKV2D-28P01615 120 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 HIGD2AQ9BW72 106 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 PDE6GP18545 87 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 SMIM11BQ8TCY0 68 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 ZCCHC13Q8WW36 166 aaKnown RBP2.79□□□□□ -1.96
SMG1-207ENST00000563235 KRTAP9-8Q9BYQ0 159 aa2.79□□□□□ -1.96
SMG1-207ENST00000563235 A0A0J9YWU9 116 aa2.78□□□□□ -1.96
SMG1-207ENST00000563235 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
SMG1-207ENST00000563235 LINC00208Q96KT6 92 aa2.78□□□□□ -1.96
SMG1-207ENST00000563235 MEGF8Q7Z7M0 2845 aa2.78□□□□□ -1.97
SMG1-207ENST00000563235 DEFB114Q30KQ6 69 aa2.77□□□□□ -1.97
SMG1-207ENST00000563235 SPRR4Q96PI1 79 aa2.77□□□□□ -1.97
SMG1-207ENST00000563235 WFDC10AQ9H1F0 79 aa2.77□□□□□ -1.97
SMG1-207ENST00000563235 ACANP16112 2415 aa2.77□□□□□ -1.97
SMG1-207ENST00000563235 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 NBDYA0A0U1RRE5 68 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 NDPQ00604 133 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 C14orf177Q52M58 125 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 ABCA1O95477 2261 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 DEFB109BQ30KR1 87 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 Q6ZTI0 123 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 MXRA5Q9NR99 2828 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 KMT2CQ8NEZ4 4911 aaKnown RBP2.76□□□□□ -1.97
SMG1-207ENST00000563235 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
SMG1-207ENST00000563235 H0Y9P7 68 aa2.75□□□□□ -1.97
SMG1-207ENST00000563235 SPACA4Q8TDM5 124 aa2.75□□□□□ -1.97
SMG1-207ENST00000563235 CDKN2A-AS1Q9UH64 79 aa2.75□□□□□ -1.97
SMG1-207ENST00000563235 TPRXLQ17RH7 258 aa2.75□□□□□ -1.97
SMG1-207ENST00000563235 LINC00304Q8N9R0 145 aa2.75□□□□□ -1.97
SMG1-207ENST00000563235 KAAG1Q9UBP8 84 aa2.75□□□□□ -1.97
SMG1-207ENST00000563235 RP1L1Q8IWN7 2480 aaPredicted RBP2.75□□□□□ -1.97
SMG1-207ENST00000563235 PKD1L1Q8TDX9 2849 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 NOTCH1P46531 2555 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 FLNAP21333 2647 aaKnown RBP2.74□□□□□ -1.97
SMG1-207ENST00000563235 A0A096LNT2 108 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 TRBV6-4A0A1B0GX49 114 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 UQCR11O14957 56 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 SMR3AQ99954 134 aa2.74□□□□□ -1.97
SMG1-207ENST00000563235 ZNF469Q96JG9 3925 aaPredicted RBP2.73□□□□□ -1.97
SMG1-207ENST00000563235 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 KRTAP7-1Q8IUC3 87 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 LINC00472Q9H8W2 130 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.73□□□□□ -1.97
SMG1-207ENST00000563235 TRGV4A0A0C4DH28 118 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 IGKV2-30P06310 120 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 APELAP0DMC3 54 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 HRES1P13985 223 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 CADP27708 2225 aa2.73□□□□□ -1.97
SMG1-207ENST00000563235 NDUFB1O75438 58 aa2.72□□□□□ -1.97
SMG1-207ENST00000563235 PRB2P02812 416 aaPredicted RBP2.72□□□□□ -1.97
SMG1-207ENST00000563235 COX6A2Q02221 97 aa2.72□□□□□ -1.97
SMG1-207ENST00000563235 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
SMG1-207ENST00000563235 Q96NJ1 140 aa2.72□□□□□ -1.97
SMG1-207ENST00000563235 CUBNO60494 3623 aa2.71□□□□□ -1.98
SMG1-207ENST00000563235 TLN2Q9Y4G6 2542 aa2.71□□□□□ -1.98
SMG1-207ENST00000563235 SLPIP03973 132 aa2.71□□□□□ -1.98
SMG1-207ENST00000563235 M0R2N4 97 aa2.71□□□□□ -1.98
SMG1-207ENST00000563235 PRRC2CQ9Y520 2896 aaKnown RBP2.71□□□□□ -1.98
SMG1-207ENST00000563235 DEFB112Q30KQ8 113 aa2.7□□□□□ -1.98
SMG1-207ENST00000563235 HAMPP81172 84 aa2.7□□□□□ -1.98
SMG1-207ENST00000563235 LINC00575Q6W349 94 aa2.7□□□□□ -1.98
SMG1-207ENST00000563235 EPPK1P58107 5090 aaKnown RBP2.7□□□□□ -1.98
SMG1-207ENST00000563235 TGP01266 2768 aa2.7□□□□□ -1.98
SMG1-207ENST00000563235 HERC2O95714 4834 aa2.69□□□□□ -1.98
SMG1-207ENST00000563235 TRGV1A0A0A0MS02 117 aa2.69□□□□□ -1.98
SMG1-207ENST00000563235 PKDREJQ9NTG1 2253 aa2.69□□□□□ -1.98
SMG1-207ENST00000563235 ANK3Q12955 4377 aaKnown RBP2.69□□□□□ -1.98
SMG1-207ENST00000563235 RPL37AP61513 92 aaKnown RBP2.69□□□□□ -1.98
SMG1-207ENST00000563235 DEFB108BQ8NET1 73 aa2.69□□□□□ -1.98
SMG1-207ENST00000563235 ROS1P08922 2347 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 NBEAL2Q6ZNJ1 2754 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 IGLV4-60A0A075B6I1 120 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 A8MTW9 85 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 MINOS1Q5TGZ0 78 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 MGAM2Q2M2H8 2515 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 C5orf56Q8N8D9 126 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 DEFB104AQ8WTQ1 72 aa2.68□□□□□ -1.98
SMG1-207ENST00000563235 PLCE1Q9P212 2302 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 DYNC2H1Q8NCM8 4307 aaKnown RBP2.67□□□□□ -1.98
SMG1-207ENST00000563235 NDUFA4O00483 81 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 COX7BP24311 80 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 TACC2O95359 2948 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 HIVEP2P31629 2446 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 TRGV2A0A075B6R0 118 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 PRKDCP78527 4128 aaKnown RBP2.67□□□□□ -1.98
SMG1-207ENST00000563235 KRTAP1-1Q07627 177 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 KCNQ1DNQ9H478 68 aa2.67□□□□□ -1.98
SMG1-207ENST00000563235 DCHS2Q6V1P9 2916 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms