RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SNCGO76070 127 aa9.53□□□□□ -0.88
CLK3-207ENST00000562389 PPDPFLQ8WWR9 84 aa9.53□□□□□ -0.88
CLK3-207ENST00000562389 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
CLK3-207ENST00000562389 A0A1B0GX51 115 aa9.52□□□□□ -0.89
CLK3-207ENST00000562389 LRP2P98164 4655 aa9.49□□□□□ -0.89
CLK3-207ENST00000562389 F8WEM9 126 aa9.49□□□□□ -0.89
CLK3-207ENST00000562389 CD164Q04900 197 aa9.49□□□□□ -0.89
CLK3-207ENST00000562389 OCIAD2Q56VL3 154 aa9.49□□□□□ -0.89
CLK3-207ENST00000562389 FP248Q71RG6 208 aaPredicted RBP9.49□□□□□ -0.89
CLK3-207ENST00000562389 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
CLK3-207ENST00000562389 LPAP08519 4548 aa9.48□□□□□ -0.89
CLK3-207ENST00000562389 IGLV7-46A0A075B6I9 117 aa9.47□□□□□ -0.89
CLK3-207ENST00000562389 M0R143 59 aa9.47□□□□□ -0.89
CLK3-207ENST00000562389 PSMB2P49721 201 aa9.47□□□□□ -0.89
CLK3-207ENST00000562389 HRCT1Q6UXD1 115 aa9.47□□□□□ -0.89
CLK3-207ENST00000562389 IGLV8-61A0A075B6I0 122 aa9.46□□□□□ -0.9
CLK3-207ENST00000562389 COX6CP09669 75 aa9.46□□□□□ -0.9
CLK3-207ENST00000562389 LIMD2Q9BT23 127 aa9.46□□□□□ -0.9
CLK3-207ENST00000562389 CLEC2BQ92478 149 aa9.45□□□□□ -0.9
CLK3-207ENST00000562389 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
CLK3-207ENST00000562389 SNHG12Q9BXW3 62 aa9.44□□□□□ -0.9
CLK3-207ENST00000562389 GHRHP01286 108 aa9.43□□□□□ -0.9
CLK3-207ENST00000562389 Q6JHZ5 121 aa9.43□□□□□ -0.9
CLK3-207ENST00000562389 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
CLK3-207ENST00000562389 Q5XG85 94 aa9.41□□□□□ -0.9
CLK3-207ENST00000562389 DNAL4O96015 105 aa9.4□□□□□ -0.9
CLK3-207ENST00000562389 IGFL1Q6UW32 110 aa9.4□□□□□ -0.9
CLK3-207ENST00000562389 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
CLK3-207ENST00000562389 H3BQ85 93 aa9.37□□□□□ -0.91
CLK3-207ENST00000562389 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
CLK3-207ENST00000562389 ORMDL1Q9P0S3 153 aa9.37□□□□□ -0.91
CLK3-207ENST00000562389 H3BUT2 72 aa9.36□□□□□ -0.91
CLK3-207ENST00000562389 LST1O00453 97 aa9.35□□□□□ -0.91
CLK3-207ENST00000562389 TRACP01848 142 aa9.35□□□□□ -0.91
CLK3-207ENST00000562389 FABP2P12104 132 aa9.35□□□□□ -0.91
CLK3-207ENST00000562389 KRTAP13-3Q3SY46 172 aa9.35□□□□□ -0.91
CLK3-207ENST00000562389 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
CLK3-207ENST00000562389 TRBV7-7A0A0K0K1E9 115 aa9.33□□□□□ -0.92
CLK3-207ENST00000562389 TMEM256-PLSCR3K7ERE1 68 aa9.32□□□□□ -0.92
CLK3-207ENST00000562389 TCL1BO95988 128 aa9.32□□□□□ -0.92
CLK3-207ENST00000562389 H3BMG7 143 aa9.31□□□□□ -0.92
CLK3-207ENST00000562389 BATFQ16520 125 aa9.31□□□□□ -0.92
CLK3-207ENST00000562389 RNF213Q63HN8 5207 aa9.3□□□□□ -0.92
CLK3-207ENST00000562389 Q6Q795 121 aa9.3□□□□□ -0.92
CLK3-207ENST00000562389 C1orf195Q5TG92 126 aa9.29□□□□□ -0.92
CLK3-207ENST00000562389 NAA38Q9BRA0 125 aaKnown RBP9.29□□□□□ -0.92
CLK3-207ENST00000562389 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
CLK3-207ENST00000562389 UBE2V1Q13404 147 aa9.27□□□□□ -0.93
CLK3-207ENST00000562389 TEN1Q86WV5 123 aa9.27□□□□□ -0.93
CLK3-207ENST00000562389 ATXN8Q156A1 80 aa9.26□□□□□ -0.93
CLK3-207ENST00000562389 LYRM7Q5U5X0 104 aa9.25□□□□□ -0.93
CLK3-207ENST00000562389 SS18L2Q9UHA2 77 aa9.22□□□□□ -0.93
CLK3-207ENST00000562389 A0A1B0GV72 72 aa9.21□□□□□ -0.94
CLK3-207ENST00000562389 BAALC-AS2P0C853 105 aa9.21□□□□□ -0.94
CLK3-207ENST00000562389 ANKRD29Q8N6D5 301 aa9.21□□□□□ -0.94
CLK3-207ENST00000562389 TRBV20-1A0A075B6N2 111 aa9.2□□□□□ -0.94
CLK3-207ENST00000562389 A0A1W2PNM2 257 aa9.2□□□□□ -0.94
CLK3-207ENST00000562389 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
CLK3-207ENST00000562389 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
CLK3-207ENST00000562389 XP32Q5T750 250 aa9.19□□□□□ -0.94
CLK3-207ENST00000562389 MUC17Q685J3 4493 aa9.19□□□□□ -0.94
CLK3-207ENST00000562389 A0A087WSZ3 146 aa9.18□□□□□ -0.94
CLK3-207ENST00000562389 TRBV7-4A0A0J9YYF1 115 aa9.17□□□□□ -0.94
CLK3-207ENST00000562389 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
CLK3-207ENST00000562389 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
CLK3-207ENST00000562389 A0A1W2PPM0 123 aa9.15□□□□□ -0.94
CLK3-207ENST00000562389 CCKP06307 115 aa9.13□□□□□ -0.95
CLK3-207ENST00000562389 DSCR8Q96T75 97 aa9.13□□□□□ -0.95
CLK3-207ENST00000562389 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
CLK3-207ENST00000562389 C9JAW5 83 aa9.11□□□□□ -0.95
CLK3-207ENST00000562389 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
CLK3-207ENST00000562389 Q96NJ1 140 aa9.11□□□□□ -0.95
CLK3-207ENST00000562389 COL5A1-AS1Q5SY13 56 aa9.09□□□□□ -0.95
CLK3-207ENST00000562389 VPS25Q9BRG1 176 aa9.07□□□□□ -0.96
CLK3-207ENST00000562389 H3BT86 120 aa9.06□□□□□ -0.96
CLK3-207ENST00000562389 LOC110117498A0A087WWA1 95 aa9.05□□□□□ -0.96
CLK3-207ENST00000562389 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
CLK3-207ENST00000562389 Q6ZQT0 140 aa9.04□□□□□ -0.96
CLK3-207ENST00000562389 OBSCN-AS1Q96MR7 158 aa9.04□□□□□ -0.96
CLK3-207ENST00000562389 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
CLK3-207ENST00000562389 MUC2Q02817 5179 aa9.03□□□□□ -0.96
CLK3-207ENST00000562389 PDE6GP18545 87 aa9.03□□□□□ -0.96
CLK3-207ENST00000562389 PCP4L1A6NKN8 68 aa9.02□□□□□ -0.97
CLK3-207ENST00000562389 LINC00472Q9H8W2 130 aa9.02□□□□□ -0.97
CLK3-207ENST00000562389 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
CLK3-207ENST00000562389 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
CLK3-207ENST00000562389 A0A0U1RQV1 116 aa9□□□□□ -0.97
CLK3-207ENST00000562389 A0A1B0GW54 56 aa9□□□□□ -0.97
CLK3-207ENST00000562389 MTURNQ8N3F0 131 aa9□□□□□ -0.97
CLK3-207ENST00000562389 SIGMAR1Q99720 223 aa9□□□□□ -0.97
CLK3-207ENST00000562389 IGKV4-1P06312 121 aa8.99□□□□□ -0.97
CLK3-207ENST00000562389 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
CLK3-207ENST00000562389 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
CLK3-207ENST00000562389 K7EP34 96 aa8.95□□□□□ -0.98
CLK3-207ENST00000562389 DEFB116Q30KQ4 102 aa8.95□□□□□ -0.98
CLK3-207ENST00000562389 Q75L30 129 aa8.94□□□□□ -0.98
CLK3-207ENST00000562389 DSCR10P59022 87 aa8.92□□□□□ -0.98
CLK3-207ENST00000562389 J3KT08 172 aa8.91□□□□□ -0.98
CLK3-207ENST00000562389 SMCPP49901 116 aaPredicted RBP8.91□□□□□ -0.98
CLK3-207ENST00000562389 LINC00313P59037 77 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms