RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SPRR1BP22528 89 aa6.78□□□□□ -1.32
RPAP1-204ENST00000562303 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
RPAP1-204ENST00000562303 M0QZ58 72 aa6.77□□□□□ -1.33
RPAP1-204ENST00000562303 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
RPAP1-204ENST00000562303 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
RPAP1-204ENST00000562303 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
RPAP1-204ENST00000562303 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
RPAP1-204ENST00000562303 BPTFQ12830 3046 aa6.75□□□□□ -1.33
RPAP1-204ENST00000562303 PRAC1Q96KF2 57 aa6.74□□□□□ -1.33
RPAP1-204ENST00000562303 A0A0C4DFX4 3053 aa6.73□□□□□ -1.33
RPAP1-204ENST00000562303 FLNAP21333 2647 aaKnown RBP6.73□□□□□ -1.33
RPAP1-204ENST00000562303 RPL37P61927 97 aaKnown RBP6.72□□□□□ -1.33
RPAP1-204ENST00000562303 OXTP01178 125 aa6.71□□□□□ -1.34
RPAP1-204ENST00000562303 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
RPAP1-204ENST00000562303 ITPR3Q14573 2671 aa6.69□□□□□ -1.34
RPAP1-204ENST00000562303 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
RPAP1-204ENST00000562303 ROMO1P60602 79 aa6.68□□□□□ -1.34
RPAP1-204ENST00000562303 HELZ2Q9BYK8 2649 aaKnown RBP6.67□□□□□ -1.34
RPAP1-204ENST00000562303 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
RPAP1-204ENST00000562303 STAB1Q9NY15 2570 aa6.67□□□□□ -1.34
RPAP1-204ENST00000562303 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
RPAP1-204ENST00000562303 Q5VV11 94 aa6.66□□□□□ -1.34
RPAP1-204ENST00000562303 CHD7Q9P2D1 2997 aa6.66□□□□□ -1.34
RPAP1-204ENST00000562303 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.34
RPAP1-204ENST00000562303 Q6ZR54 194 aa6.62□□□□□ -1.35
RPAP1-204ENST00000562303 Q5XG85 94 aa6.6□□□□□ -1.35
RPAP1-204ENST00000562303 CFAP54Q96N23 3096 aa6.59□□□□□ -1.35
RPAP1-204ENST00000562303 PANO1I0J062 215 aa6.59□□□□□ -1.36
RPAP1-204ENST00000562303 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.36
RPAP1-204ENST00000562303 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.36
RPAP1-204ENST00000562303 MKI67P46013 3256 aaKnown RBP6.57□□□□□ -1.36
RPAP1-204ENST00000562303 RANBP2P49792 3224 aaKnown RBP6.56□□□□□ -1.36
RPAP1-204ENST00000562303 A0A087X002 238 aa6.56□□□□□ -1.36
RPAP1-204ENST00000562303 BRCA2P51587 3418 aa6.55□□□□□ -1.36
RPAP1-204ENST00000562303 LAMA3Q16787 3333 aa6.53□□□□□ -1.36
RPAP1-204ENST00000562303 LAMA2P24043 3122 aaKnown RBP6.53□□□□□ -1.36
RPAP1-204ENST00000562303 H3BS24 57 aa6.53□□□□□ -1.36
RPAP1-204ENST00000562303 CFAP46Q8IYW2 2715 aa6.52□□□□□ -1.37
RPAP1-204ENST00000562303 HTTP42858 3142 aa6.52□□□□□ -1.37
RPAP1-204ENST00000562303 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
RPAP1-204ENST00000562303 NBEAL1Q6ZS30 2694 aa6.46□□□□□ -1.37
RPAP1-204ENST00000562303 CHD9Q3L8U1 2897 aa6.46□□□□□ -1.38
RPAP1-204ENST00000562303 A8MUU9 505 aa6.45□□□□□ -1.38
RPAP1-204ENST00000562303 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
RPAP1-204ENST00000562303 UNC80Q8N2C7 3258 aa6.44□□□□□ -1.38
RPAP1-204ENST00000562303 NOTCH2NLQ7Z3S9 236 aa6.44□□□□□ -1.38
RPAP1-204ENST00000562303 SETXQ7Z333 2677 aaKnown RBP6.43□□□□□ -1.38
RPAP1-204ENST00000562303 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
RPAP1-204ENST00000562303 CENPEQ02224 2701 aa6.42□□□□□ -1.38
RPAP1-204ENST00000562303 RPS29P62273 56 aaKnown RBP6.42□□□□□ -1.38
RPAP1-204ENST00000562303 TEP1Q99973 2627 aaKnown RBP6.41□□□□□ -1.38
RPAP1-204ENST00000562303 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
RPAP1-204ENST00000562303 PRUNE2Q8WUY3 3088 aa6.41□□□□□ -1.38
RPAP1-204ENST00000562303 TEX15Q9BXT5 2789 aa6.41□□□□□ -1.38
RPAP1-204ENST00000562303 XIRP2A4UGR9 3374 aa6.4□□□□□ -1.39
RPAP1-204ENST00000562303 MGAQ8IWI9 3026 aa6.39□□□□□ -1.39
RPAP1-204ENST00000562303 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
RPAP1-204ENST00000562303 ASB16-AS1Q495Z4 193 aa6.38□□□□□ -1.39
RPAP1-204ENST00000562303 KRTAP11-1Q8IUC1 163 aa6.37□□□□□ -1.39
RPAP1-204ENST00000562303 WDFY4Q6ZS81 3184 aa6.37□□□□□ -1.39
RPAP1-204ENST00000562303 A8MU10 97 aa6.36□□□□□ -1.39
RPAP1-204ENST00000562303 CHD6Q8TD26 2715 aa6.36□□□□□ -1.39
RPAP1-204ENST00000562303 TRIOO75962 3097 aa6.36□□□□□ -1.39
RPAP1-204ENST00000562303 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
RPAP1-204ENST00000562303 DNAH14Q0VDD8 3507 aa6.33□□□□□ -1.4
RPAP1-204ENST00000562303 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
RPAP1-204ENST00000562303 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
RPAP1-204ENST00000562303 CDH23Q9H251 3354 aa6.32□□□□□ -1.4
RPAP1-204ENST00000562303 COL6A5A8TX70 2615 aa6.31□□□□□ -1.4
RPAP1-204ENST00000562303 UNC79Q9P2D8 2635 aa6.31□□□□□ -1.4
RPAP1-204ENST00000562303 FREM2Q5SZK8 3169 aa6.3□□□□□ -1.4
RPAP1-204ENST00000562303 CELSR3Q9NYQ7 3312 aa6.29□□□□□ -1.4
RPAP1-204ENST00000562303 TRANK1O15050 2925 aa6.28□□□□□ -1.4
RPAP1-204ENST00000562303 TNP1P09430 55 aa6.27□□□□□ -1.41
RPAP1-204ENST00000562303 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
RPAP1-204ENST00000562303 VPS13AQ96RL7 3174 aa6.26□□□□□ -1.41
RPAP1-204ENST00000562303 MAP1AP78559 2803 aaPredicted RBP6.25□□□□□ -1.41
RPAP1-204ENST00000562303 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
RPAP1-204ENST00000562303 NOTCH1P46531 2555 aa6.25□□□□□ -1.41
RPAP1-204ENST00000562303 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
RPAP1-204ENST00000562303 ZNF292O60281 2723 aa6.24□□□□□ -1.41
RPAP1-204ENST00000562303 GCN1Q92616 2671 aaKnown RBP6.21□□□□□ -1.42
RPAP1-204ENST00000562303 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
RPAP1-204ENST00000562303 BAHCC1Q9P281 2608 aa6.21□□□□□ -1.42
RPAP1-204ENST00000562303 FRYQ5TBA9 3013 aa6.2□□□□□ -1.42
RPAP1-204ENST00000562303 VCANP13611 3396 aa6.19□□□□□ -1.42
RPAP1-204ENST00000562303 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
RPAP1-204ENST00000562303 SZT2Q5T011 3432 aa6.18□□□□□ -1.42
RPAP1-204ENST00000562303 KRTAP21-3Q3LHN1 58 aa6.16□□□□□ -1.42
RPAP1-204ENST00000562303 A6NN06 94 aa6.15□□□□□ -1.43
RPAP1-204ENST00000562303 DSPP15924 2871 aaKnown RBP6.14□□□□□ -1.43
RPAP1-204ENST00000562303 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
RPAP1-204ENST00000562303 SPEGQ15772 3267 aa6.13□□□□□ -1.43
RPAP1-204ENST00000562303 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
RPAP1-204ENST00000562303 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
RPAP1-204ENST00000562303 LAMA1P25391 3075 aa6.11□□□□□ -1.43
RPAP1-204ENST00000562303 NBEAL2Q6ZNJ1 2754 aa6.11□□□□□ -1.43
RPAP1-204ENST00000562303 IGSF10Q6WRI0 2623 aa6.07□□□□□ -1.44
RPAP1-204ENST00000562303 KALRNO60229 2985 aa6.07□□□□□ -1.44
RPAP1-204ENST00000562303 NBEAQ8NFP9 2946 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms