RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 LRP2P98164 4655 aa13.32□□□□□ -0.28
SMPD3-202ENST00000561749 A0A0G2JQZ4 141 aa13.31□□□□□ -0.28
SMPD3-202ENST00000561749 PSMB2P49721 201 aa13.29□□□□□ -0.28
SMPD3-202ENST00000561749 LPAP08519 4548 aa13.29□□□□□ -0.28
SMPD3-202ENST00000561749 F8WEM9 126 aa13.27□□□□□ -0.29
SMPD3-202ENST00000561749 RPS29P62273 56 aaKnown RBP13.27□□□□□ -0.29
SMPD3-202ENST00000561749 CLEC2BQ92478 149 aa13.27□□□□□ -0.29
SMPD3-202ENST00000561749 IGLV7-46A0A075B6I9 117 aa13.26□□□□□ -0.29
SMPD3-202ENST00000561749 SNCGO76070 127 aa13.26□□□□□ -0.29
SMPD3-202ENST00000561749 TSTD3H0UI37 97 aa13.22□□□□□ -0.29
SMPD3-202ENST00000561749 SNHG12Q9BXW3 62 aa13.22□□□□□ -0.29
SMPD3-202ENST00000561749 UBR4Q5T4S7 5183 aa13.21□□□□□ -0.29
SMPD3-202ENST00000561749 M0R143 59 aa13.21□□□□□ -0.29
SMPD3-202ENST00000561749 PPDPFLQ8WWR9 84 aa13.21□□□□□ -0.29
SMPD3-202ENST00000561749 A0A1B0GX51 115 aa13.2□□□□□ -0.3
SMPD3-202ENST00000561749 CD164Q04900 197 aa13.19□□□□□ -0.3
SMPD3-202ENST00000561749 FP248Q71RG6 208 aaPredicted RBP13.19□□□□□ -0.3
SMPD3-202ENST00000561749 COX6CP09669 75 aa13.18□□□□□ -0.3
SMPD3-202ENST00000561749 OCIAD2Q56VL3 154 aa13.18□□□□□ -0.3
SMPD3-202ENST00000561749 LIMD2Q9BT23 127 aa13.18□□□□□ -0.3
SMPD3-202ENST00000561749 IGLV8-61A0A075B6I0 122 aa13.15□□□□□ -0.3
SMPD3-202ENST00000561749 H3BUT2 72 aa13.15□□□□□ -0.3
SMPD3-202ENST00000561749 IGFL1Q6UW32 110 aa13.14□□□□□ -0.31
SMPD3-202ENST00000561749 SCGB1C2P0DMR2 95 aa13.13□□□□□ -0.31
SMPD3-202ENST00000561749 FABP2P12104 132 aa13.13□□□□□ -0.31
SMPD3-202ENST00000561749 TPRXLQ17RH7 258 aa13.13□□□□□ -0.31
SMPD3-202ENST00000561749 Q6JHZ5 121 aa13.13□□□□□ -0.31
SMPD3-202ENST00000561749 DNAL4O96015 105 aa13.12□□□□□ -0.31
SMPD3-202ENST00000561749 NDUFV3P56181 108 aaKnown RBP13.11□□□□□ -0.31
SMPD3-202ENST00000561749 NAA38Q9BRA0 125 aaKnown RBP13.11□□□□□ -0.31
SMPD3-202ENST00000561749 BATFQ16520 125 aa13.1□□□□□ -0.31
SMPD3-202ENST00000561749 CDIP1Q9H305 208 aa13.1□□□□□ -0.31
SMPD3-202ENST00000561749 ORMDL1Q9P0S3 153 aa13.08□□□□□ -0.32
SMPD3-202ENST00000561749 GHRHP01286 108 aa13.07□□□□□ -0.32
SMPD3-202ENST00000561749 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
SMPD3-202ENST00000561749 Q5XG85 94 aa13.04□□□□□ -0.32
SMPD3-202ENST00000561749 H3BMG7 143 aa13.03□□□□□ -0.32
SMPD3-202ENST00000561749 LST1O00453 97 aa13.03□□□□□ -0.32
SMPD3-202ENST00000561749 TRBV7-7A0A0K0K1E9 115 aa13.02□□□□□ -0.33
SMPD3-202ENST00000561749 A0A1B0GV72 72 aa13.02□□□□□ -0.33
SMPD3-202ENST00000561749 TRACP01848 142 aa13.02□□□□□ -0.33
SMPD3-202ENST00000561749 C1orf195Q5TG92 126 aa13□□□□□ -0.33
SMPD3-202ENST00000561749 TCL1BO95988 128 aa12.99□□□□□ -0.33
SMPD3-202ENST00000561749 H3BQ85 93 aa12.97□□□□□ -0.33
SMPD3-202ENST00000561749 TMEM256-PLSCR3K7ERE1 68 aa12.97□□□□□ -0.33
SMPD3-202ENST00000561749 ATXN8Q156A1 80 aa12.92□□□□□ -0.34
SMPD3-202ENST00000561749 RNF213Q63HN8 5207 aa12.91□□□□□ -0.34
SMPD3-202ENST00000561749 TEN1Q86WV5 123 aa12.91□□□□□ -0.34
SMPD3-202ENST00000561749 C9orf92A6NGG3 77 aa12.9□□□□□ -0.34
SMPD3-202ENST00000561749 UBE2V1Q13404 147 aa12.9□□□□□ -0.34
SMPD3-202ENST00000561749 Q6Q795 121 aa12.9□□□□□ -0.34
SMPD3-202ENST00000561749 BAALC-AS2P0C853 105 aa12.89□□□□□ -0.35
SMPD3-202ENST00000561749 ANKRD29Q8N6D5 301 aa12.89□□□□□ -0.35
SMPD3-202ENST00000561749 A0A1W2PNM2 257 aa12.88□□□□□ -0.35
SMPD3-202ENST00000561749 ASB16-AS1Q495Z4 193 aa12.88□□□□□ -0.35
SMPD3-202ENST00000561749 A0A087WSZ3 146 aa12.86□□□□□ -0.35
SMPD3-202ENST00000561749 TAX1BP3O14907 124 aa12.86□□□□□ -0.35
SMPD3-202ENST00000561749 LYRM7Q5U5X0 104 aa12.86□□□□□ -0.35
SMPD3-202ENST00000561749 XP32Q5T750 250 aa12.85□□□□□ -0.35
SMPD3-202ENST00000561749 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
SMPD3-202ENST00000561749 SS18L2Q9UHA2 77 aa12.82□□□□□ -0.36
SMPD3-202ENST00000561749 TRBV20-1A0A075B6N2 111 aa12.79□□□□□ -0.36
SMPD3-202ENST00000561749 RBM3P98179 157 aaKnown RBP12.79□□□□□ -0.36
SMPD3-202ENST00000561749 MUC17Q685J3 4493 aa12.78□□□□□ -0.36
SMPD3-202ENST00000561749 CCKP06307 115 aa12.78□□□□□ -0.36
SMPD3-202ENST00000561749 TRBV7-4A0A0J9YYF1 115 aa12.77□□□□□ -0.37
SMPD3-202ENST00000561749 A0A1W2PPM0 123 aa12.77□□□□□ -0.37
SMPD3-202ENST00000561749 C9JAW5 83 aa12.77□□□□□ -0.37
SMPD3-202ENST00000561749 VPS25Q9BRG1 176 aa12.76□□□□□ -0.37
SMPD3-202ENST00000561749 DSCR8Q96T75 97 aa12.75□□□□□ -0.37
SMPD3-202ENST00000561749 SEC61BP60468 96 aaKnown RBP12.73□□□□□ -0.37
SMPD3-202ENST00000561749 PCP4L1A6NKN8 68 aa12.72□□□□□ -0.37
SMPD3-202ENST00000561749 Q96NJ1 140 aa12.71□□□□□ -0.37
SMPD3-202ENST00000561749 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
SMPD3-202ENST00000561749 COL5A1-AS1Q5SY13 56 aa12.68□□□□□ -0.38
SMPD3-202ENST00000561749 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
SMPD3-202ENST00000561749 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
SMPD3-202ENST00000561749 SIGMAR1Q99720 223 aa12.64□□□□□ -0.39
SMPD3-202ENST00000561749 SPCS1Q9Y6A9 102 aa12.64□□□□□ -0.39
SMPD3-202ENST00000561749 C14orf132Q9NPU4 83 aa12.63□□□□□ -0.39
SMPD3-202ENST00000561749 DEFB116Q30KQ4 102 aa12.62□□□□□ -0.39
SMPD3-202ENST00000561749 PCOTHQ58A44 107 aa12.62□□□□□ -0.39
SMPD3-202ENST00000561749 KRTAP4-1Q9BYQ7 146 aa12.62□□□□□ -0.39
SMPD3-202ENST00000561749 Q6ZQT0 140 aa12.61□□□□□ -0.39
SMPD3-202ENST00000561749 H3BT86 120 aa12.6□□□□□ -0.39
SMPD3-202ENST00000561749 IGKV4-1P06312 121 aa12.6□□□□□ -0.39
SMPD3-202ENST00000561749 LOC110117498A0A087WWA1 95 aa12.59□□□□□ -0.39
SMPD3-202ENST00000561749 MUC2Q02817 5179 aa12.59□□□□□ -0.39
SMPD3-202ENST00000561749 RPL37P61927 97 aaKnown RBP12.58□□□□□ -0.4
SMPD3-202ENST00000561749 LINC00472Q9H8W2 130 aa12.58□□□□□ -0.4
SMPD3-202ENST00000561749 PDE6GP18545 87 aa12.53□□□□□ -0.4
SMPD3-202ENST00000561749 DSCR10P59022 87 aa12.53□□□□□ -0.4
SMPD3-202ENST00000561749 A0A0U1RQV1 116 aa12.52□□□□□ -0.41
SMPD3-202ENST00000561749 K7EP34 96 aa12.49□□□□□ -0.41
SMPD3-202ENST00000561749 C21orf62-AS1Q17RA5 79 aa12.49□□□□□ -0.41
SMPD3-202ENST00000561749 SMCPP49901 116 aaPredicted RBP12.48□□□□□ -0.41
SMPD3-202ENST00000561749 IGHV6-1A0A0B4J1U7 121 aa12.44□□□□□ -0.42
SMPD3-202ENST00000561749 Q75L30 129 aa12.44□□□□□ -0.42
SMPD3-202ENST00000561749 A0A1B0GW54 56 aa12.43□□□□□ -0.42
SMPD3-202ENST00000561749 LINC00313P59037 77 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms