RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 BATF3Q9NR55 127 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 A0A1B0GV50 99 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 D6R8Y8 96 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 H3BPC8 53 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 H3BRM9 83 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 M0R2T5 61 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 DDTP30046 118 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 SPRR1AP35321 89 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 RGS21Q2M5E4 152 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 Q8N8P6 123 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 COX7B2Q8TF08 81 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 KCNQ1DNQ9H478 68 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 MAP1LC3AQ9H492 121 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 TOMM7Q9P0U1 55 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 V9GYV3 84 aa1.64□□□□□ -2.15
HERC1-215ENST00000561436 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 TRAV9-1A0A075B6T8 112 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 LINC00313P59037 77 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 Q5XG85 94 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 AKAP14Q86UN6 197 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 TOMM6Q96B49 74 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 PRELID3AQ96N28 172 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 SMIM7Q9BQ49 75 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 LIMD2Q9BT23 127 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 CDKN2A-AS1Q9UH64 79 aa1.63□□□□□ -2.15
HERC1-215ENST00000561436 NPYP01303 97 aa1.62□□□□□ -2.15
HERC1-215ENST00000561436 RAB5BP61020 215 aa1.62□□□□□ -2.15
HERC1-215ENST00000561436 PRLHP81277 87 aa1.62□□□□□ -2.15
HERC1-215ENST00000561436 JOSD1Q15040 202 aaPredicted RBP1.62□□□□□ -2.15
HERC1-215ENST00000561436 TCTE3Q8IZS6 198 aa1.62□□□□□ -2.15
HERC1-215ENST00000561436 MIEN1Q9BRT3 115 aa1.62□□□□□ -2.15
HERC1-215ENST00000561436 NAT8Q9UHE5 227 aa1.62□□□□□ -2.15
HERC1-215ENST00000561436 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
HERC1-215ENST00000561436 TRBV10-2A0A0K0K1G8 114 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 LINC01546A6NGU7 62 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 TMEM238C9JI98 176 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 PEA15Q15121 130 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 BATFQ16520 125 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 COX6B2Q6YFQ2 88 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 SMCR5Q8TEV8 140 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 CST9LQ9H4G1 147 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 ERG28Q9UKR5 140 aa1.61□□□□□ -2.15
HERC1-215ENST00000561436 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
HERC1-215ENST00000561436 LOC107984156A0A0G2JMH3 177 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 ETDCA0A1B0GVM5 59 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 SRP19P09132 144 aaKnown RBP1.6□□□□□ -2.15
HERC1-215ENST00000561436 IGLC3P0DOY3 106 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 SPRR1BP22528 89 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 HINT1P49773 126 aaPredicted RBP1.6□□□□□ -2.15
HERC1-215ENST00000561436 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
HERC1-215ENST00000561436 IFITM2Q01629 132 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 ARL17AQ8IVW1 177 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 Q8NDZ9 215 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 SCGB3A1Q96QR1 104 aa1.6□□□□□ -2.15
HERC1-215ENST00000561436 A0A1B0GW54 56 aa1.59□□□□□ -2.15
HERC1-215ENST00000561436 MT-ND4LP03901 98 aa1.59□□□□□ -2.15
HERC1-215ENST00000561436 RAB14P61106 215 aa1.59□□□□□ -2.15
HERC1-215ENST00000561436 ADIRFQ15847 76 aa1.59□□□□□ -2.15
HERC1-215ENST00000561436 ZNF625Q96I27 306 aaPredicted RBP1.59□□□□□ -2.15
HERC1-215ENST00000561436 USH2AO75445 5202 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 C20orf202A1L168 122 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 C11orf86A6NJI1 115 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 NDUFC2O95298 119 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 LINC00158P58513 81 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 MRPL54Q6P161 138 aaKnown RBP1.58□□□□□ -2.16
HERC1-215ENST00000561436 Q6ZRX8 168 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 C2orf91Q6ZV80 131 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 Q9BRP9 147 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 PRO1933Q9H354 126 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 LAMTOR3Q9UHA4 124 aa1.58□□□□□ -2.16
HERC1-215ENST00000561436 KMT2DO14686 5537 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 ZNF815PA8K554 130 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 H7C2G1 150 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 TCL1BO95988 128 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 SPINK8P0C7L1 97 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 MEIG1Q5JSS6 88 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 C9orf153Q5TBE3 101 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 ATP11AUNQ6ZP68 121 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 COMMD7Q86VX2 200 aa1.57□□□□□ -2.16
HERC1-215ENST00000561436 TRBV20-1A0A075B6N2 111 aa1.56□□□□□ -2.16
HERC1-215ENST00000561436 MYMXA0A1B0GTQ4 84 aa1.56□□□□□ -2.16
HERC1-215ENST00000561436 AKR1D1P51857 326 aa1.56□□□□□ -2.16
HERC1-215ENST00000561436 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
HERC1-215ENST00000561436 BAGE3Q86Y29 109 aa1.56□□□□□ -2.16
HERC1-215ENST00000561436 TRAV23DV6A0A075B6W5 121 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 TRAV12-1A0A0B4J245 112 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 TRBV7-6A0A0J9YX20 115 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 TRBV10-3A0A0K0K1G6 114 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 TEX49A0A1B0GTD5 131 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 ERC2-IT1O76042 136 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 ADCYAP1P18509 176 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 FABP9Q0Z7S8 132 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 S100A7L2Q5SY68 101 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 TMEM170BQ5T4T1 132 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 C1orf195Q5TG92 126 aa1.55□□□□□ -2.16
HERC1-215ENST00000561436 SMCO4Q9NRQ5 59 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 2522.3 ms