RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 DDTP30046 118 aa3.52□□□□□ -1.85
LRRC28-220ENST00000561253 SLC25A34Q6PIV7 304 aa3.52□□□□□ -1.85
LRRC28-220ENST00000561253 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
LRRC28-220ENST00000561253 LRP2P98164 4655 aa3.51□□□□□ -1.85
LRRC28-220ENST00000561253 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
LRRC28-220ENST00000561253 TRAV23DV6A0A075B6W5 121 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 OXTP01178 125 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
LRRC28-220ENST00000561253 PRLHP81277 87 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 SMCR5Q8TEV8 140 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 Q9BRP9 147 aa3.5□□□□□ -1.85
LRRC28-220ENST00000561253 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
LRRC28-220ENST00000561253 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
LRRC28-220ENST00000561253 ZNF73O43830 326 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-220ENST00000561253 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
LRRC28-220ENST00000561253 TAL2Q16559 108 aa3.49□□□□□ -1.85
LRRC28-220ENST00000561253 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
LRRC28-220ENST00000561253 UQCR10Q9UDW1 63 aa3.49□□□□□ -1.85
LRRC28-220ENST00000561253 FXYD2P54710 66 aa3.48□□□□□ -1.85
LRRC28-220ENST00000561253 S100A7L2Q5SY68 101 aa3.48□□□□□ -1.85
LRRC28-220ENST00000561253 Q6ZRX8 168 aa3.48□□□□□ -1.85
LRRC28-220ENST00000561253 FAM19A1Q7Z5A9 133 aa3.48□□□□□ -1.85
LRRC28-220ENST00000561253 TRAV13-2A0A0B4J235 113 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 TRBV7-6A0A0J9YX20 115 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 UBE2AP49459 152 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 ELOF1P60002 83 aaKnown RBP3.47□□□□□ -1.85
LRRC28-220ENST00000561253 S100A12P80511 92 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 HSD52Q0P140 79 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 SMIM11BQ8TCY0 68 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 C12orf57Q99622 126 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 PRO1933Q9H354 126 aa3.47□□□□□ -1.85
LRRC28-220ENST00000561253 A0A0B4J2C4 111 aa3.46□□□□□ -1.86
LRRC28-220ENST00000561253 ETDCA0A1B0GVM5 59 aa3.46□□□□□ -1.86
LRRC28-220ENST00000561253 LINC00483Q53H64 154 aa3.46□□□□□ -1.86
LRRC28-220ENST00000561253 OR13C6PQ8NH95 151 aa3.46□□□□□ -1.86
LRRC28-220ENST00000561253 SPRR4Q96PI1 79 aa3.46□□□□□ -1.86
LRRC28-220ENST00000561253 A6NDN8 102 aa3.45□□□□□ -1.86
LRRC28-220ENST00000561253 FAM229BQ4G0N7 80 aa3.45□□□□□ -1.86
LRRC28-220ENST00000561253 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
LRRC28-220ENST00000561253 HIGD2AQ9BW72 106 aa3.45□□□□□ -1.86
LRRC28-220ENST00000561253 CBY1Q9Y3M2 126 aa3.45□□□□□ -1.86
LRRC28-220ENST00000561253 K7ERJ3 54 aa3.44□□□□□ -1.86
LRRC28-220ENST00000561253 SPRR1BP22528 89 aa3.44□□□□□ -1.86
LRRC28-220ENST00000561253 COX7BP24311 80 aa3.44□□□□□ -1.86
LRRC28-220ENST00000561253 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
LRRC28-220ENST00000561253 ST20-AS1Q8NBB2 130 aa3.44□□□□□ -1.86
LRRC28-220ENST00000561253 LPAP08519 4548 aa3.44□□□□□ -1.86
LRRC28-220ENST00000561253 UBR4Q5T4S7 5183 aa3.43□□□□□ -1.86
LRRC28-220ENST00000561253 IGLV5-48A0A075B6I7 105 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 CRYGAP11844 174 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 CTAG1AP78358 180 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 C3orf22Q8N5N4 141 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
LRRC28-220ENST00000561253 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-220ENST00000561253 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
LRRC28-220ENST00000561253 TSTD3H0UI37 97 aa3.4□□□□□ -1.87
LRRC28-220ENST00000561253 TSPAN13O95857 204 aa3.4□□□□□ -1.87
LRRC28-220ENST00000561253 HINT1P49773 126 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-220ENST00000561253 SEC61GP60059 68 aa3.4□□□□□ -1.87
LRRC28-220ENST00000561253 RAB37Q96AX2 223 aa3.4□□□□□ -1.87
LRRC28-220ENST00000561253 ZNF706Q9Y5V0 76 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-220ENST00000561253 H7C2G1 150 aa3.39□□□□□ -1.87
LRRC28-220ENST00000561253 hADV29S1A0JD25 119 aa3.38□□□□□ -1.87
LRRC28-220ENST00000561253 M0R143 59 aa3.38□□□□□ -1.87
LRRC28-220ENST00000561253 Q6ZQY7 126 aa3.38□□□□□ -1.87
LRRC28-220ENST00000561253 TEX49A0A1B0GTD5 131 aa3.37□□□□□ -1.87
LRRC28-220ENST00000561253 A0A1B0GX51 115 aa3.37□□□□□ -1.87
LRRC28-220ENST00000561253 H0YGX0 51 aa3.37□□□□□ -1.87
LRRC28-220ENST00000561253 VAMP3Q15836 100 aa3.37□□□□□ -1.87
LRRC28-220ENST00000561253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.37□□□□□ -1.87
LRRC28-220ENST00000561253 MOBPQ13875 183 aa3.36□□□□□ -1.87
LRRC28-220ENST00000561253 SSBP3-AS1Q7Z2R9 100 aa3.36□□□□□ -1.87
LRRC28-220ENST00000561253 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
LRRC28-220ENST00000561253 CLEC2BQ92478 149 aa3.36□□□□□ -1.87
LRRC28-220ENST00000561253 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
LRRC28-220ENST00000561253 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
LRRC28-220ENST00000561253 LST1O00453 97 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 TAX1BP3O14907 124 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 SLC25A20O43772 301 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 CAMK2N1Q7Z7J9 78 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
LRRC28-220ENST00000561253 Q8N9L7 120 aa3.34□□□□□ -1.87
LRRC28-220ENST00000561253 NAA38Q9BRA0 125 aaKnown RBP3.34□□□□□ -1.87
LRRC28-220ENST00000561253 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
LRRC28-220ENST00000561253 TRACP01848 142 aa3.33□□□□□ -1.88
LRRC28-220ENST00000561253 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
LRRC28-220ENST00000561253 OCIAD2Q56VL3 154 aa3.33□□□□□ -1.88
LRRC28-220ENST00000561253 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
LRRC28-220ENST00000561253 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
LRRC28-220ENST00000561253 MUC2Q02817 5179 aa3.32□□□□□ -1.88
LRRC28-220ENST00000561253 TCL1BO95988 128 aa3.32□□□□□ -1.88
LRRC28-220ENST00000561253 SPINK1P00995 79 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms