RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 ITSN1Q15811 1721 aa0.66□□□□□ -2.3
HMG20A-211ENST00000560867 CCDC88BA6NC98 1476 aa0.66□□□□□ -2.3
HMG20A-211ENST00000560867 SAMD9LQ8IVG5 1584 aa0.66□□□□□ -2.3
HMG20A-211ENST00000560867 PLCH1Q4KWH8 1693 aa0.65□□□□□ -2.3
HMG20A-211ENST00000560867 COL7A1Q02388 2944 aa0.65□□□□□ -2.3
HMG20A-211ENST00000560867 EFCAB5A4FU69 1503 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 DEPDC5O75140 1603 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 CCDC180Q9P1Z9 1646 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 A0A0G2JMZ2 1700 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 IGLC2P0DOY2 106 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 PLGLAQ15195 96 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 C6orf201Q7Z4U5 140 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 TSC2P49815 1807 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 LTN1O94822 1766 aa0.65□□□□□ -2.31
HMG20A-211ENST00000560867 PDCD11Q14690 1871 aaKnown RBP0.65□□□□□ -2.31
HMG20A-211ENST00000560867 RRBP1Q9P2E9 1410 aaKnown RBP0.64□□□□□ -2.31
HMG20A-211ENST00000560867 CHD9Q3L8U1 2897 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 UBR1Q8IWV7 1749 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 MGAQ8IWI9 3026 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 A0A1B0GU69 56 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 LINC00959A0A1B0GUT2 108 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 CEBPZOSA8MTT3 80 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 I3L2K1 104 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 PPLO60437 1756 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 RICTORQ6R327 1708 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 ABCC1P33527 1531 aa0.64□□□□□ -2.31
HMG20A-211ENST00000560867 LAMA5O15230 3695 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 URB1O60287 2271 aaKnown RBP0.63□□□□□ -2.31
HMG20A-211ENST00000560867 PRKDCP78527 4128 aaKnown RBP0.63□□□□□ -2.31
HMG20A-211ENST00000560867 A0A0D9SFI3 127 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 S100A3P33764 101 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 DEFB121Q5J5C9 76 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 KNDC1Q76NI1 1749 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 ATP7AQ04656 1500 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 AKAP6Q13023 2319 aa0.63□□□□□ -2.31
HMG20A-211ENST00000560867 ZNF831Q5JPB2 1677 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 NHSQ6T4R5 1651 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 TIAM2Q8IVF5 1701 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 COX6A2Q02221 97 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 C18orf32Q8TCD1 76 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 CNFNQ9BYD5 112 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 MROH1Q8NDA8 1641 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 KNL1Q8NG31 2342 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 DUOX2Q9NRD8 1548 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 KDM3BQ7LBC6 1761 aa0.62□□□□□ -2.31
HMG20A-211ENST00000560867 DNAJC13O75165 2243 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 ABCA5Q8WWZ7 1642 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 TRBV7-4A0A0J9YYF1 115 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 A0A1B0GUT8 65 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 TP53AIP1Q9HCN2 124 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 PLXNB2O15031 1838 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 WNK3Q9BYP7 1800 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 FAT3Q8TDW7 4589 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 USH2AO75445 5202 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 ATP7BP35670 1465 aa0.61□□□□□ -2.31
HMG20A-211ENST00000560867 CLTCL1P53675 1640 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 LMTK2Q8IWU2 1503 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 TACC2O95359 2948 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 MROH2AA6NES4 1674 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 LELP1Q5T871 98 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 ANKARQ7Z5J8 1434 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 QSER1Q2KHR3 1735 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 NCOA2Q15596 1464 aa0.6□□□□□ -2.31
HMG20A-211ENST00000560867 WNK2Q9Y3S1 2297 aa0.59□□□□□ -2.31
HMG20A-211ENST00000560867 XRN1Q8IZH2 1706 aaKnown RBP0.59□□□□□ -2.31
HMG20A-211ENST00000560867 ABCC8Q09428 1581 aa0.59□□□□□ -2.31
HMG20A-211ENST00000560867 CFDP00746 253 aaPredicted RBP0.59□□□□□ -2.31
HMG20A-211ENST00000560867 DEFB112Q30KQ8 113 aa0.59□□□□□ -2.31
HMG20A-211ENST00000560867 SMCO4Q9NRQ5 59 aa0.59□□□□□ -2.31
HMG20A-211ENST00000560867 PRO0255Q9UI72 69 aa0.59□□□□□ -2.31
HMG20A-211ENST00000560867 PLCE1Q9P212 2302 aa0.59□□□□□ -2.32
HMG20A-211ENST00000560867 DNAH1Q9P2D7 4330 aa0.59□□□□□ -2.32
HMG20A-211ENST00000560867 LAMA1P25391 3075 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 CACNA1CQ13936 2221 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 NRAPQ86VF7 1730 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 DYNC2H1Q8NCM8 4307 aaKnown RBP0.58□□□□□ -2.32
HMG20A-211ENST00000560867 SRRM2Q9UQ35 2752 aaKnown RBP0.58□□□□□ -2.32
HMG20A-211ENST00000560867 MYH4Q9Y623 1939 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 MDN1Q9NU22 5596 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 TRAV21A0A0B4J279 112 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 SMIM13P0DJ93 91 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 PIGYQ3MUY2 71 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 CRIPTQ9P021 101 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 AGLP35573 1532 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 LY75O60449 1722 aa0.58□□□□□ -2.32
HMG20A-211ENST00000560867 CFAP74Q9C0B2 1584 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 COL14A1Q05707 1796 aaKnown RBP0.57□□□□□ -2.32
HMG20A-211ENST00000560867 KMT2AQ03164 3969 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 HFM1A2PYH4 1435 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 C5P01031 1676 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 NKTRP30414 1462 aaKnown RBP0.57□□□□□ -2.32
HMG20A-211ENST00000560867 Q5BKY6 102 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 Q8IZM0 81 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 LRRC37AA6NMS7 1700 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 SACSQ9NZJ4 4579 aa0.57□□□□□ -2.32
HMG20A-211ENST00000560867 CLIP1P30622 1438 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms