RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 SPRR1BP22528 89 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 NREPQ16612 68 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 Q5BKY6 102 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 HEPN1Q6WQI6 88 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 ASPMQ8IZT6 3477 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 CEP250Q9BV73 2442 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 BRCA2P51587 3418 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 DIP2AQ14689 1571 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 ABCA10Q8WWZ4 1543 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 NHSQ6T4R5 1651 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 ABCA9Q8IUA7 1624 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 ACACBO00763 2458 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 RIF1Q5UIP0 2472 aaKnown RBP0.68□□□□□ -2.3
SPG11-218ENST00000559754 CDC42BPGQ6DT37 1551 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 OTOGQ6ZRI0 2925 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 SMR3AQ99954 134 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 LMTK2Q8IWU2 1503 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 ASXL1Q8IXJ9 1541 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 MYO9AB2RTY4 2548 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 ZFYVE26Q68DK2 2539 aa0.68□□□□□ -2.3
SPG11-218ENST00000559754 SPTAN1Q13813 2472 aaKnown RBP0.67□□□□□ -2.3
SPG11-218ENST00000559754 DEPDC5O75140 1603 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 RNF17Q9BXT8 1623 aaKnown RBP0.67□□□□□ -2.3
SPG11-218ENST00000559754 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
SPG11-218ENST00000559754 CFAP47Q6ZTR5 3102 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 SPTBN5Q9NRC6 3674 aaKnown RBP0.67□□□□□ -2.3
SPG11-218ENST00000559754 INO80Q9ULG1 1556 aaPredicted RBP0.67□□□□□ -2.3
SPG11-218ENST00000559754 CFAP54Q96N23 3096 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 MTORP42345 2549 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 ATP7AQ04656 1500 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 XIRP2A4UGR9 3374 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 UBR5O95071 2799 aaPredicted RBP0.67□□□□□ -2.3
SPG11-218ENST00000559754 NRAPQ86VF7 1730 aa0.67□□□□□ -2.3
SPG11-218ENST00000559754 APCP25054 2843 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 IGSF10Q6WRI0 2623 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 DEFB105AQ8NG35 78 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 DNAH12Q6ZR08 3092 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 ABCA5Q8WWZ7 1642 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 MADDQ8WXG6 1647 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 ADCY10Q96PN6 1610 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 USP34Q70CQ2 3546 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 CHD9Q3L8U1 2897 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 FRAS1Q86XX4 4008 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 CEP295Q9C0D2 2601 aa0.66□□□□□ -2.3
SPG11-218ENST00000559754 FAM186AA6NE01 2351 aa0.65□□□□□ -2.3
SPG11-218ENST00000559754 MROH2AA6NES4 1674 aa0.65□□□□□ -2.3
SPG11-218ENST00000559754 PRUNE2Q8WUY3 3088 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 SMIM31A0A1B0GVY4 71 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 DEFB109BQ30KR1 87 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 COX6B2Q6YFQ2 88 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 TENM3Q9P273 2699 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 DCHS1Q96JQ0 3298 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 FLNCQ14315 2725 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 MXRA5Q9NR99 2828 aa0.65□□□□□ -2.31
SPG11-218ENST00000559754 HFM1A2PYH4 1435 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 TJP1Q07157 1748 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 CSMD1Q96PZ7 3565 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 PKD1L1Q8TDX9 2849 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 DNAH14Q0VDD8 3507 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 UGGT1Q9NYU2 1555 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 CROCC2H7BZ55 1655 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 SMG1Q96Q15 3661 aaKnown RBP0.64□□□□□ -2.31
SPG11-218ENST00000559754 PCNX1Q96RV3 2341 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 C4AP0C0L4 1744 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 C4BP0C0L5 1744 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 KIF21BO75037 1637 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 EFCAB6Q5THR3 1501 aa0.64□□□□□ -2.31
SPG11-218ENST00000559754 CDH23Q9H251 3354 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 WDR87Q6ZQQ6 2873 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 H3BVH4 76 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 NDUFA4O00483 81 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 SPINK4O60575 86 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 SPINK1P00995 79 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 PRO3102Q9H379 93 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 TOP2AP11388 1531 aaKnown RBP0.63□□□□□ -2.31
SPG11-218ENST00000559754 SYCP2Q9BX26 1530 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 ZNF469Q96JG9 3925 aaPredicted RBP0.63□□□□□ -2.31
SPG11-218ENST00000559754 ATRQ13535 2644 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 MYO15AQ9UKN7 3530 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 GVINP1Q7Z2Y8 2422 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 SPG11Q96JI7 2443 aa0.63□□□□□ -2.31
SPG11-218ENST00000559754 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.31
SPG11-218ENST00000559754 APLNQ9ULZ1 77 aa0.62□□□□□ -2.31
SPG11-218ENST00000559754 IQGAP1P46940 1657 aa0.62□□□□□ -2.31
SPG11-218ENST00000559754 PKDREJQ9NTG1 2253 aa0.62□□□□□ -2.31
SPG11-218ENST00000559754 PRRC2CQ9Y520 2896 aaKnown RBP0.62□□□□□ -2.31
SPG11-218ENST00000559754 HTTP42858 3142 aa0.62□□□□□ -2.31
SPG11-218ENST00000559754 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
SPG11-218ENST00000559754 TIAM1Q13009 1591 aa0.62□□□□□ -2.31
SPG11-218ENST00000559754 EP300Q09472 2414 aaPredicted RBP0.62□□□□□ -2.31
SPG11-218ENST00000559754 MAP1BP46821 2468 aaKnown RBP0.61□□□□□ -2.31
SPG11-218ENST00000559754 SPTBN1Q01082 2364 aaKnown RBP0.61□□□□□ -2.31
SPG11-218ENST00000559754 VPS13AQ96RL7 3174 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms