RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 Q8NBF4 154 aa4.9□□□□□ -1.63
TPM1-213ENST00000558400 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.63
TPM1-213ENST00000558400 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
TPM1-213ENST00000558400 SLC25A20O43772 301 aa4.89□□□□□ -1.63
TPM1-213ENST00000558400 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
TPM1-213ENST00000558400 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
TPM1-213ENST00000558400 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
TPM1-213ENST00000558400 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
TPM1-213ENST00000558400 TEX49A0A1B0GTD5 131 aa4.88□□□□□ -1.63
TPM1-213ENST00000558400 MOBPQ13875 183 aa4.88□□□□□ -1.63
TPM1-213ENST00000558400 BVES-AS1Q5T3Y7 98 aa4.88□□□□□ -1.63
TPM1-213ENST00000558400 ST20-AS1Q8NBB2 130 aa4.88□□□□□ -1.63
TPM1-213ENST00000558400 A0A0U1RQV1 116 aa4.87□□□□□ -1.63
TPM1-213ENST00000558400 A0A1B0GV90 55 aa4.87□□□□□ -1.63
TPM1-213ENST00000558400 HSD52Q0P140 79 aa4.87□□□□□ -1.63
TPM1-213ENST00000558400 C9orf153Q5TBE3 101 aa4.87□□□□□ -1.63
TPM1-213ENST00000558400 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
TPM1-213ENST00000558400 FP248Q71RG6 208 aaPredicted RBP4.86□□□□□ -1.63
TPM1-213ENST00000558400 DEFB105AQ8NG35 78 aa4.86□□□□□ -1.63
TPM1-213ENST00000558400 MUC2Q02817 5179 aa4.85□□□□□ -1.63
TPM1-213ENST00000558400 H3BS24 57 aa4.85□□□□□ -1.63
TPM1-213ENST00000558400 K7ERJ3 54 aa4.85□□□□□ -1.63
TPM1-213ENST00000558400 SNCGO76070 127 aa4.85□□□□□ -1.63
TPM1-213ENST00000558400 COL5A1-AS1Q5SY13 56 aa4.85□□□□□ -1.63
TPM1-213ENST00000558400 IGLV5-48A0A075B6I7 105 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 FXYD2P54710 66 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 TPRXLQ17RH7 258 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 LINC00575Q6W349 94 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 RAB37Q96AX2 223 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 RETNLBQ9BQ08 111 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 LPAP08519 4548 aa4.84□□□□□ -1.63
TPM1-213ENST00000558400 hADV29S1A0JD25 119 aa4.83□□□□□ -1.64
TPM1-213ENST00000558400 CFC1BP0CG36 223 aa4.83□□□□□ -1.64
TPM1-213ENST00000558400 CFC1P0CG37 223 aa4.83□□□□□ -1.64
TPM1-213ENST00000558400 CD164Q04900 197 aa4.83□□□□□ -1.64
TPM1-213ENST00000558400 CEND1Q8N111 149 aa4.83□□□□□ -1.64
TPM1-213ENST00000558400 A0A0B4J2C4 111 aa4.82□□□□□ -1.64
TPM1-213ENST00000558400 H0YGX0 51 aa4.82□□□□□ -1.64
TPM1-213ENST00000558400 Q1RN00 199 aa4.82□□□□□ -1.64
TPM1-213ENST00000558400 NAA38Q9BRA0 125 aaKnown RBP4.82□□□□□ -1.64
TPM1-213ENST00000558400 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
TPM1-213ENST00000558400 TAX1BP3O14907 124 aa4.81□□□□□ -1.64
TPM1-213ENST00000558400 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
TPM1-213ENST00000558400 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.81□□□□□ -1.64
TPM1-213ENST00000558400 SMIM29Q86T20 159 aa4.81□□□□□ -1.64
TPM1-213ENST00000558400 Q8N377 158 aa4.81□□□□□ -1.64
TPM1-213ENST00000558400 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
TPM1-213ENST00000558400 F8WEM9 126 aa4.8□□□□□ -1.64
TPM1-213ENST00000558400 PPDPFLQ8WWR9 84 aa4.8□□□□□ -1.64
TPM1-213ENST00000558400 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
TPM1-213ENST00000558400 PRO1854Q9UHT4 67 aa4.8□□□□□ -1.64
TPM1-213ENST00000558400 H7C2G1 150 aa4.79□□□□□ -1.64
TPM1-213ENST00000558400 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
TPM1-213ENST00000558400 OCIAD2Q56VL3 154 aa4.79□□□□□ -1.64
TPM1-213ENST00000558400 Q6ZQY7 126 aa4.79□□□□□ -1.64
TPM1-213ENST00000558400 Q5XG85 94 aa4.78□□□□□ -1.64
TPM1-213ENST00000558400 Q6JHZ5 121 aa4.78□□□□□ -1.64
TPM1-213ENST00000558400 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
TPM1-213ENST00000558400 A0A1B0GX51 115 aa4.77□□□□□ -1.65
TPM1-213ENST00000558400 H3BUT2 72 aa4.77□□□□□ -1.65
TPM1-213ENST00000558400 HRCT1Q6UXD1 115 aa4.77□□□□□ -1.65
TPM1-213ENST00000558400 IGLV8-61A0A075B6I0 122 aa4.75□□□□□ -1.65
TPM1-213ENST00000558400 C9orf118A6NHY6 69 aa4.75□□□□□ -1.65
TPM1-213ENST00000558400 TCL1BO95988 128 aa4.75□□□□□ -1.65
TPM1-213ENST00000558400 COX6CP09669 75 aa4.75□□□□□ -1.65
TPM1-213ENST00000558400 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
TPM1-213ENST00000558400 H3BQ85 93 aa4.74□□□□□ -1.65
TPM1-213ENST00000558400 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
TPM1-213ENST00000558400 A0A1W2PPM0 123 aa4.73□□□□□ -1.65
TPM1-213ENST00000558400 PSMB2P49721 201 aa4.72□□□□□ -1.65
TPM1-213ENST00000558400 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
TPM1-213ENST00000558400 CLEC2BQ92478 149 aa4.72□□□□□ -1.65
TPM1-213ENST00000558400 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
TPM1-213ENST00000558400 SPCS1Q9Y6A9 102 aa4.72□□□□□ -1.65
TPM1-213ENST00000558400 K7EP34 96 aa4.71□□□□□ -1.66
TPM1-213ENST00000558400 TRIAP1O43715 76 aa4.71□□□□□ -1.66
TPM1-213ENST00000558400 FABP2P12104 132 aa4.71□□□□□ -1.66
TPM1-213ENST00000558400 NDUFV3P56181 108 aaKnown RBP4.71□□□□□ -1.66
TPM1-213ENST00000558400 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
TPM1-213ENST00000558400 IGFL1Q6UW32 110 aa4.71□□□□□ -1.66
TPM1-213ENST00000558400 FAM218AQ96MZ4 157 aa4.71□□□□□ -1.66
TPM1-213ENST00000558400 A0A0G2JQZ4 141 aa4.7□□□□□ -1.66
TPM1-213ENST00000558400 DNAL4O96015 105 aa4.7□□□□□ -1.66
TPM1-213ENST00000558400 ASB16-AS1Q495Z4 193 aa4.7□□□□□ -1.66
TPM1-213ENST00000558400 C1orf195Q5TG92 126 aa4.7□□□□□ -1.66
TPM1-213ENST00000558400 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
TPM1-213ENST00000558400 TMEM256-PLSCR3K7ERE1 68 aa4.69□□□□□ -1.66
TPM1-213ENST00000558400 H3BMG7 143 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 SCGB1C2P0DMR2 95 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 UBE2V1Q13404 147 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 Q6Q795 121 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 MTURNQ8N3F0 131 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 ORMDL1Q9P0S3 153 aa4.68□□□□□ -1.66
TPM1-213ENST00000558400 GTF2H5Q6ZYL4 71 aa4.67□□□□□ -1.66
TPM1-213ENST00000558400 SS18L2Q9UHA2 77 aa4.67□□□□□ -1.66
TPM1-213ENST00000558400 TRACP01848 142 aa4.66□□□□□ -1.66
TPM1-213ENST00000558400 LST1O00453 97 aa4.65□□□□□ -1.67
TPM1-213ENST00000558400 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
TPM1-213ENST00000558400 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms