RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 Q8N377 158 aa5.14□□□□□ -1.59
SPG11-207ENST00000558138 SMIM6P0DI80 62 aa5.13□□□□□ -1.59
SPG11-207ENST00000558138 LINC01547P58512 204 aaPredicted RBP5.13□□□□□ -1.59
SPG11-207ENST00000558138 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
SPG11-207ENST00000558138 CDIP1Q9H305 208 aa5.13□□□□□ -1.59
SPG11-207ENST00000558138 DNAL4O96015 105 aa5.12□□□□□ -1.59
SPG11-207ENST00000558138 COX6CP09669 75 aa5.12□□□□□ -1.59
SPG11-207ENST00000558138 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
SPG11-207ENST00000558138 SMIM29Q86T20 159 aa5.12□□□□□ -1.59
SPG11-207ENST00000558138 TRIAP1O43715 76 aa5.11□□□□□ -1.59
SPG11-207ENST00000558138 GHRHP01286 108 aa5.11□□□□□ -1.59
SPG11-207ENST00000558138 OCIAD2Q56VL3 154 aa5.11□□□□□ -1.59
SPG11-207ENST00000558138 A0A0G2JQZ4 141 aa5.1□□□□□ -1.59
SPG11-207ENST00000558138 M0R143 59 aa5.1□□□□□ -1.59
SPG11-207ENST00000558138 SCGB1C2P0DMR2 95 aa5.1□□□□□ -1.59
SPG11-207ENST00000558138 FABP2P12104 132 aa5.1□□□□□ -1.59
SPG11-207ENST00000558138 PPDPFLQ8WWR9 84 aa5.1□□□□□ -1.59
SPG11-207ENST00000558138 TSTD3H0UI37 97 aa5.09□□□□□ -1.59
SPG11-207ENST00000558138 CD164Q04900 197 aa5.09□□□□□ -1.59
SPG11-207ENST00000558138 Q6JHZ5 121 aa5.09□□□□□ -1.59
SPG11-207ENST00000558138 CLEC2BQ92478 149 aa5.09□□□□□ -1.59
SPG11-207ENST00000558138 FAM218AQ96MZ4 157 aa5.09□□□□□ -1.59
SPG11-207ENST00000558138 LRP2P98164 4655 aa5.08□□□□□ -1.6
SPG11-207ENST00000558138 A0A1B0GX51 115 aa5.08□□□□□ -1.6
SPG11-207ENST00000558138 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
SPG11-207ENST00000558138 H3BUT2 72 aa5.07□□□□□ -1.6
SPG11-207ENST00000558138 TCL1BO95988 128 aa5.07□□□□□ -1.6
SPG11-207ENST00000558138 BATFQ16520 125 aa5.07□□□□□ -1.6
SPG11-207ENST00000558138 ORMDL1Q9P0S3 153 aa5.07□□□□□ -1.6
SPG11-207ENST00000558138 A0A1B0GV72 72 aa5.05□□□□□ -1.6
SPG11-207ENST00000558138 NDUFV3P56181 108 aaKnown RBP5.05□□□□□ -1.6
SPG11-207ENST00000558138 IGFL1Q6UW32 110 aa5.05□□□□□ -1.6
SPG11-207ENST00000558138 LPAP08519 4548 aa5.04□□□□□ -1.6
SPG11-207ENST00000558138 H3BQ85 93 aa5.04□□□□□ -1.6
SPG11-207ENST00000558138 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
SPG11-207ENST00000558138 IGLV8-61A0A075B6I0 122 aa5.03□□□□□ -1.6
SPG11-207ENST00000558138 H3BMG7 143 aa5.03□□□□□ -1.6
SPG11-207ENST00000558138 TRBV7-7A0A0K0K1E9 115 aa5.02□□□□□ -1.61
SPG11-207ENST00000558138 TMEM256-PLSCR3K7ERE1 68 aa5.02□□□□□ -1.61
SPG11-207ENST00000558138 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
SPG11-207ENST00000558138 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
SPG11-207ENST00000558138 NAA38Q9BRA0 125 aaKnown RBP5.01□□□□□ -1.61
SPG11-207ENST00000558138 TRACP01848 142 aa5□□□□□ -1.61
SPG11-207ENST00000558138 LYRM7Q5U5X0 104 aa5□□□□□ -1.61
SPG11-207ENST00000558138 Q5XG85 94 aa5□□□□□ -1.61
SPG11-207ENST00000558138 ANKRD29Q8N6D5 301 aa5□□□□□ -1.61
SPG11-207ENST00000558138 SS18L2Q9UHA2 77 aa5□□□□□ -1.61
SPG11-207ENST00000558138 LST1O00453 97 aa4.99□□□□□ -1.61
SPG11-207ENST00000558138 ATXN8Q156A1 80 aa4.99□□□□□ -1.61
SPG11-207ENST00000558138 C1orf195Q5TG92 126 aa4.99□□□□□ -1.61
SPG11-207ENST00000558138 TEN1Q86WV5 123 aa4.99□□□□□ -1.61
SPG11-207ENST00000558138 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
SPG11-207ENST00000558138 VPS25Q9BRG1 176 aa4.98□□□□□ -1.61
SPG11-207ENST00000558138 A0A087WSZ3 146 aa4.97□□□□□ -1.61
SPG11-207ENST00000558138 A0A0U1RQV1 116 aa4.97□□□□□ -1.61
SPG11-207ENST00000558138 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.62
SPG11-207ENST00000558138 UBE2V1Q13404 147 aa4.96□□□□□ -1.62
SPG11-207ENST00000558138 XP32Q5T750 250 aa4.96□□□□□ -1.62
SPG11-207ENST00000558138 DSCR8Q96T75 97 aa4.96□□□□□ -1.62
SPG11-207ENST00000558138 CCKP06307 115 aa4.95□□□□□ -1.62
SPG11-207ENST00000558138 RBM3P98179 157 aaKnown RBP4.95□□□□□ -1.62
SPG11-207ENST00000558138 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
SPG11-207ENST00000558138 Q6Q795 121 aa4.95□□□□□ -1.62
SPG11-207ENST00000558138 PCP4L1A6NKN8 68 aa4.93□□□□□ -1.62
SPG11-207ENST00000558138 SIGMAR1Q99720 223 aa4.93□□□□□ -1.62
SPG11-207ENST00000558138 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
SPG11-207ENST00000558138 TRBV20-1A0A075B6N2 111 aa4.92□□□□□ -1.62
SPG11-207ENST00000558138 TRBV7-4A0A0J9YYF1 115 aa4.92□□□□□ -1.62
SPG11-207ENST00000558138 A0A1W2PNM2 257 aa4.92□□□□□ -1.62
SPG11-207ENST00000558138 C9JAW5 83 aa4.92□□□□□ -1.62
SPG11-207ENST00000558138 C9orf118A6NHY6 69 aa4.91□□□□□ -1.62
SPG11-207ENST00000558138 JMJD7-PLA2G4BH0Y9G9 81 aa4.9□□□□□ -1.63
SPG11-207ENST00000558138 OBSCN-AS1Q96MR7 158 aa4.9□□□□□ -1.63
SPG11-207ENST00000558138 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
SPG11-207ENST00000558138 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
SPG11-207ENST00000558138 IGKV4-1P06312 121 aa4.89□□□□□ -1.63
SPG11-207ENST00000558138 PCOTHQ58A44 107 aa4.89□□□□□ -1.63
SPG11-207ENST00000558138 Q96NJ1 140 aa4.88□□□□□ -1.63
SPG11-207ENST00000558138 C21orf62-AS1Q17RA5 79 aa4.87□□□□□ -1.63
SPG11-207ENST00000558138 DEFB116Q30KQ4 102 aa4.87□□□□□ -1.63
SPG11-207ENST00000558138 COL5A1-AS1Q5SY13 56 aa4.87□□□□□ -1.63
SPG11-207ENST00000558138 MTURNQ8N3F0 131 aa4.87□□□□□ -1.63
SPG11-207ENST00000558138 SPCS1Q9Y6A9 102 aa4.87□□□□□ -1.63
SPG11-207ENST00000558138 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
SPG11-207ENST00000558138 C14orf132Q9NPU4 83 aa4.86□□□□□ -1.63
SPG11-207ENST00000558138 DSCR10P59022 87 aa4.85□□□□□ -1.63
SPG11-207ENST00000558138 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
SPG11-207ENST00000558138 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
SPG11-207ENST00000558138 H3BT86 120 aa4.84□□□□□ -1.63
SPG11-207ENST00000558138 PDE6GP18545 87 aa4.84□□□□□ -1.63
SPG11-207ENST00000558138 LOC110117498A0A087WWA1 95 aa4.83□□□□□ -1.64
SPG11-207ENST00000558138 LINC00313P59037 77 aa4.83□□□□□ -1.64
SPG11-207ENST00000558138 Q6ZQT0 140 aa4.83□□□□□ -1.64
SPG11-207ENST00000558138 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
SPG11-207ENST00000558138 J3KT08 172 aa4.81□□□□□ -1.64
SPG11-207ENST00000558138 NDUFB1O75438 58 aa4.81□□□□□ -1.64
SPG11-207ENST00000558138 Q75L30 129 aa4.81□□□□□ -1.64
SPG11-207ENST00000558138 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
SPG11-207ENST00000558138 LINC00472Q9H8W2 130 aa4.81□□□□□ -1.64
SPG11-207ENST00000558138 NREPQ16612 68 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms