RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 COX6CP09669 75 aa14.75□□□□□ -0.05
SMAD6-202ENST00000557916 A0A1B0GX51 115 aa14.73□□□□□ -0.05
SMAD6-202ENST00000557916 CLEC2BQ92478 149 aa14.72□□□□□ -0.05
SMAD6-202ENST00000557916 SPINK1P00995 79 aa14.7□□□□□ -0.06
SMAD6-202ENST00000557916 OCIAD2Q56VL3 154 aa14.69□□□□□ -0.06
SMAD6-202ENST00000557916 PPDPFLQ8WWR9 84 aa14.69□□□□□ -0.06
SMAD6-202ENST00000557916 F8WEM9 126 aa14.66□□□□□ -0.06
SMAD6-202ENST00000557916 SCGB1C2P0DMR2 95 aa14.66□□□□□ -0.06
SMAD6-202ENST00000557916 BATFQ16520 125 aa14.66□□□□□ -0.06
SMAD6-202ENST00000557916 SNHG12Q9BXW3 62 aa14.66□□□□□ -0.06
SMAD6-202ENST00000557916 PRR4Q16378 134 aa14.64□□□□□ -0.07
SMAD6-202ENST00000557916 RETNLBQ9BQ08 111 aa14.62□□□□□ -0.07
SMAD6-202ENST00000557916 DNAL4O96015 105 aa14.61□□□□□ -0.07
SMAD6-202ENST00000557916 RPS29P62273 56 aaKnown RBP14.61□□□□□ -0.07
SMAD6-202ENST00000557916 GHRHP01286 108 aa14.6□□□□□ -0.07
SMAD6-202ENST00000557916 HRCT1Q6UXD1 115 aa14.6□□□□□ -0.07
SMAD6-202ENST00000557916 NAA38Q9BRA0 125 aaKnown RBP14.58□□□□□ -0.07
SMAD6-202ENST00000557916 A0A0G2JQZ4 141 aa14.58□□□□□ -0.08
SMAD6-202ENST00000557916 IGLV8-61A0A075B6I0 122 aa14.57□□□□□ -0.08
SMAD6-202ENST00000557916 LST1O00453 97 aa14.56□□□□□ -0.08
SMAD6-202ENST00000557916 CD164Q04900 197 aa14.56□□□□□ -0.08
SMAD6-202ENST00000557916 FABP2P12104 132 aa14.55□□□□□ -0.08
SMAD6-202ENST00000557916 ORMDL1Q9P0S3 153 aa14.55□□□□□ -0.08
SMAD6-202ENST00000557916 TRACP01848 142 aa14.54□□□□□ -0.08
SMAD6-202ENST00000557916 NDUFV3P56181 108 aaKnown RBP14.54□□□□□ -0.08
SMAD6-202ENST00000557916 Q6JHZ5 121 aa14.54□□□□□ -0.08
SMAD6-202ENST00000557916 H3BQ85 93 aa14.5□□□□□ -0.09
SMAD6-202ENST00000557916 H3BUT2 72 aa14.49□□□□□ -0.09
SMAD6-202ENST00000557916 LRP2P98164 4655 aa14.49□□□□□ -0.09
SMAD6-202ENST00000557916 IGFL1Q6UW32 110 aa14.49□□□□□ -0.09
SMAD6-202ENST00000557916 LIMD2Q9BT23 127 aa14.49□□□□□ -0.09
SMAD6-202ENST00000557916 TCL1BO95988 128 aa14.47□□□□□ -0.09
SMAD6-202ENST00000557916 TMEM256-PLSCR3K7ERE1 68 aa14.46□□□□□ -0.09
SMAD6-202ENST00000557916 IGLV7-46A0A075B6I9 117 aa14.45□□□□□ -0.1
SMAD6-202ENST00000557916 H3BMG7 143 aa14.45□□□□□ -0.1
SMAD6-202ENST00000557916 ATXN8Q156A1 80 aa14.45□□□□□ -0.1
SMAD6-202ENST00000557916 TAX1BP3O14907 124 aa14.44□□□□□ -0.1
SMAD6-202ENST00000557916 LYRM7Q5U5X0 104 aa14.44□□□□□ -0.1
SMAD6-202ENST00000557916 FP248Q71RG6 208 aaPredicted RBP14.44□□□□□ -0.1
SMAD6-202ENST00000557916 C9orf118A6NHY6 69 aa14.43□□□□□ -0.1
SMAD6-202ENST00000557916 LPAP08519 4548 aa14.43□□□□□ -0.1
SMAD6-202ENST00000557916 Q5XG85 94 aa14.4□□□□□ -0.1
SMAD6-202ENST00000557916 PCP4L1A6NKN8 68 aa14.38□□□□□ -0.11
SMAD6-202ENST00000557916 UBE2V1Q13404 147 aa14.38□□□□□ -0.11
SMAD6-202ENST00000557916 TRBV20-1A0A075B6N2 111 aa14.37□□□□□ -0.11
SMAD6-202ENST00000557916 BAALC-AS2P0C853 105 aa14.37□□□□□ -0.11
SMAD6-202ENST00000557916 TRBV7-7A0A0K0K1E9 115 aa14.36□□□□□ -0.11
SMAD6-202ENST00000557916 A0A1B0GV72 72 aa14.35□□□□□ -0.11
SMAD6-202ENST00000557916 UBR4Q5T4S7 5183 aa14.35□□□□□ -0.11
SMAD6-202ENST00000557916 A0A1W2PPM0 123 aa14.34□□□□□ -0.11
SMAD6-202ENST00000557916 TPRXLQ17RH7 258 aa14.33□□□□□ -0.11
SMAD6-202ENST00000557916 COL5A1-AS1Q5SY13 56 aa14.33□□□□□ -0.11
SMAD6-202ENST00000557916 ANKRD29Q8N6D5 301 aa14.32□□□□□ -0.12
SMAD6-202ENST00000557916 Q6Q795 121 aa14.31□□□□□ -0.12
SMAD6-202ENST00000557916 TEN1Q86WV5 123 aa14.31□□□□□ -0.12
SMAD6-202ENST00000557916 C1orf195Q5TG92 126 aa14.27□□□□□ -0.12
SMAD6-202ENST00000557916 C9JAW5 83 aa14.24□□□□□ -0.13
SMAD6-202ENST00000557916 RBM3P98179 157 aaKnown RBP14.24□□□□□ -0.13
SMAD6-202ENST00000557916 KRTAP13-3Q3SY46 172 aa14.24□□□□□ -0.13
SMAD6-202ENST00000557916 CDIP1Q9H305 208 aa14.24□□□□□ -0.13
SMAD6-202ENST00000557916 A0A1W2PNM2 257 aa14.24□□□□□ -0.13
SMAD6-202ENST00000557916 ASB16-AS1Q495Z4 193 aa14.24□□□□□ -0.13
SMAD6-202ENST00000557916 TRBV7-4A0A0J9YYF1 115 aa14.2□□□□□ -0.14
SMAD6-202ENST00000557916 DSCR8Q96T75 97 aa14.2□□□□□ -0.14
SMAD6-202ENST00000557916 SS18L2Q9UHA2 77 aa14.2□□□□□ -0.14
SMAD6-202ENST00000557916 A0A087WSZ3 146 aa14.19□□□□□ -0.14
SMAD6-202ENST00000557916 SPCS1Q9Y6A9 102 aa14.19□□□□□ -0.14
SMAD6-202ENST00000557916 CCKP06307 115 aa14.17□□□□□ -0.14
SMAD6-202ENST00000557916 JMJD7-PLA2G4BH0Y9G9 81 aa14.15□□□□□ -0.14
SMAD6-202ENST00000557916 H3BT86 120 aa14.12□□□□□ -0.15
SMAD6-202ENST00000557916 MTURNQ8N3F0 131 aa14.12□□□□□ -0.15
SMAD6-202ENST00000557916 VPS25Q9BRG1 176 aa14.12□□□□□ -0.15
SMAD6-202ENST00000557916 C9orf92A6NGG3 77 aa14.07□□□□□ -0.16
SMAD6-202ENST00000557916 OBSCN-AS1Q96MR7 158 aa14.06□□□□□ -0.16
SMAD6-202ENST00000557916 LOC110117498A0A087WWA1 95 aa14.05□□□□□ -0.16
SMAD6-202ENST00000557916 K7EP34 96 aa14.05□□□□□ -0.16
SMAD6-202ENST00000557916 C14orf132Q9NPU4 83 aa14.05□□□□□ -0.16
SMAD6-202ENST00000557916 RNF213Q63HN8 5207 aa14.04□□□□□ -0.16
SMAD6-202ENST00000557916 Q6ZQT0 140 aa14.04□□□□□ -0.16
SMAD6-202ENST00000557916 PDE6GP18545 87 aa14.03□□□□□ -0.16
SMAD6-202ENST00000557916 XP32Q5T750 250 aa14.02□□□□□ -0.16
SMAD6-202ENST00000557916 Q96NJ1 140 aa14.02□□□□□ -0.16
SMAD6-202ENST00000557916 C21orf62-AS1Q17RA5 79 aa13.98□□□□□ -0.17
SMAD6-202ENST00000557916 SMCPP49901 116 aaPredicted RBP13.96□□□□□ -0.18
SMAD6-202ENST00000557916 GTF2H5Q6ZYL4 71 aa13.96□□□□□ -0.18
SMAD6-202ENST00000557916 PRO0461Q9UI25 63 aa13.94□□□□□ -0.18
SMAD6-202ENST00000557916 MUC17Q685J3 4493 aa13.94□□□□□ -0.18
SMAD6-202ENST00000557916 LINC00472Q9H8W2 130 aa13.93□□□□□ -0.18
SMAD6-202ENST00000557916 A0A1B0GW54 56 aa13.92□□□□□ -0.18
SMAD6-202ENST00000557916 SIGMAR1Q99720 223 aa13.91□□□□□ -0.18
SMAD6-202ENST00000557916 IGKV4-1P06312 121 aa13.9□□□□□ -0.18
SMAD6-202ENST00000557916 DEFB116Q30KQ4 102 aa13.9□□□□□ -0.19
SMAD6-202ENST00000557916 SEC61BP60468 96 aaKnown RBP13.88□□□□□ -0.19
SMAD6-202ENST00000557916 F8W1H4 67 aa13.81□□□□□ -0.2
SMAD6-202ENST00000557916 MUC2Q02817 5179 aa13.8□□□□□ -0.2
SMAD6-202ENST00000557916 J3KT08 172 aa13.77□□□□□ -0.21
SMAD6-202ENST00000557916 RPL37P61927 97 aaKnown RBP13.76□□□□□ -0.21
SMAD6-202ENST00000557916 DSCR10P59022 87 aa13.75□□□□□ -0.21
SMAD6-202ENST00000557916 NREPQ16612 68 aa13.75□□□□□ -0.21
SMAD6-202ENST00000557916 PCOTHQ58A44 107 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms