RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 KRTAP21-3Q3LHN1 58 aa5.18□□□□□ -1.58
CHD8-213ENST00000557364 UTRNP46939 3433 aa5.18□□□□□ -1.58
CHD8-213ENST00000557364 H7BZZ5 65 aa5.17□□□□□ -1.58
CHD8-213ENST00000557364 NOTCH1P46531 2555 aa5.17□□□□□ -1.58
CHD8-213ENST00000557364 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
CHD8-213ENST00000557364 A0A1B0GU33 70 aa5.16□□□□□ -1.58
CHD8-213ENST00000557364 A0A0D9SG42 100 aa5.15□□□□□ -1.58
CHD8-213ENST00000557364 Q1T7F1 81 aa5.15□□□□□ -1.59
CHD8-213ENST00000557364 GCN1Q92616 2671 aaKnown RBP5.15□□□□□ -1.59
CHD8-213ENST00000557364 A0A0G2JQZ4 141 aa5.15□□□□□ -1.59
CHD8-213ENST00000557364 NSD1Q96L73 2696 aaPredicted RBP5.14□□□□□ -1.59
CHD8-213ENST00000557364 OCR1Q9BZK8 76 aa5.13□□□□□ -1.59
CHD8-213ENST00000557364 STAB2Q8WWQ8 2551 aa5.12□□□□□ -1.59
CHD8-213ENST00000557364 R4GN34 69 aa5.1□□□□□ -1.59
CHD8-213ENST00000557364 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
CHD8-213ENST00000557364 LCA10Q71F78 164 aa5.09□□□□□ -1.6
CHD8-213ENST00000557364 IGSF10Q6WRI0 2623 aa5.09□□□□□ -1.6
CHD8-213ENST00000557364 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
CHD8-213ENST00000557364 SPINK7P58062 85 aa5.08□□□□□ -1.6
CHD8-213ENST00000557364 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
CHD8-213ENST00000557364 CEP350Q5VT06 3117 aa5.07□□□□□ -1.6
CHD8-213ENST00000557364 LINC00472Q9H8W2 130 aa5.06□□□□□ -1.6
CHD8-213ENST00000557364 DNAH12Q6ZR08 3092 aa5.06□□□□□ -1.6
CHD8-213ENST00000557364 MAP1AP78559 2803 aaPredicted RBP5.06□□□□□ -1.6
CHD8-213ENST00000557364 Q6ZR54 194 aa5.05□□□□□ -1.6
CHD8-213ENST00000557364 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
CHD8-213ENST00000557364 Q75L30 129 aa5.04□□□□□ -1.6
CHD8-213ENST00000557364 Q5W150 140 aa5.04□□□□□ -1.6
CHD8-213ENST00000557364 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
CHD8-213ENST00000557364 PCNTO95613 3336 aa5.03□□□□□ -1.6
CHD8-213ENST00000557364 TRANK1O15050 2925 aa5.02□□□□□ -1.61
CHD8-213ENST00000557364 KRTAP1-5Q9BYS1 174 aa5.01□□□□□ -1.61
CHD8-213ENST00000557364 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
CHD8-213ENST00000557364 KRTAP26-1Q6PEX3 210 aa5□□□□□ -1.61
CHD8-213ENST00000557364 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
CHD8-213ENST00000557364 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
CHD8-213ENST00000557364 UBR5O95071 2799 aaPredicted RBP4.97□□□□□ -1.61
CHD8-213ENST00000557364 CHD7Q9P2D1 2997 aa4.96□□□□□ -1.62
CHD8-213ENST00000557364 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
CHD8-213ENST00000557364 C5orf42Q9H799 3197 aa4.96□□□□□ -1.62
CHD8-213ENST00000557364 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
CHD8-213ENST00000557364 MGAQ8IWI9 3026 aa4.94□□□□□ -1.62
CHD8-213ENST00000557364 M0QZ58 72 aa4.94□□□□□ -1.62
CHD8-213ENST00000557364 DSPP15924 2871 aaKnown RBP4.94□□□□□ -1.62
CHD8-213ENST00000557364 Q5XG85 94 aa4.92□□□□□ -1.62
CHD8-213ENST00000557364 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
CHD8-213ENST00000557364 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.62
CHD8-213ENST00000557364 CHD9Q3L8U1 2897 aa4.9□□□□□ -1.63
CHD8-213ENST00000557364 Q8NDZ9 215 aa4.89□□□□□ -1.63
CHD8-213ENST00000557364 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
CHD8-213ENST00000557364 PANO1I0J062 215 aa4.89□□□□□ -1.63
CHD8-213ENST00000557364 ROMO1P60602 79 aa4.88□□□□□ -1.63
CHD8-213ENST00000557364 ITPR1Q14643 2758 aa4.86□□□□□ -1.63
CHD8-213ENST00000557364 NBEAL2Q6ZNJ1 2754 aa4.86□□□□□ -1.63
CHD8-213ENST00000557364 Q6ZRN7 208 aaPredicted RBP4.85□□□□□ -1.63
CHD8-213ENST00000557364 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
CHD8-213ENST00000557364 A0A087X002 238 aa4.84□□□□□ -1.63
CHD8-213ENST00000557364 APCP25054 2843 aa4.81□□□□□ -1.64
CHD8-213ENST00000557364 FLNCQ14315 2725 aa4.81□□□□□ -1.64
CHD8-213ENST00000557364 UTP20O75691 2785 aaKnown RBP4.8□□□□□ -1.64
CHD8-213ENST00000557364 A0A0C4DFX4 3053 aa4.8□□□□□ -1.64
CHD8-213ENST00000557364 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
CHD8-213ENST00000557364 HIVEP1P15822 2718 aa4.78□□□□□ -1.64
CHD8-213ENST00000557364 Q5VV11 94 aa4.78□□□□□ -1.64
CHD8-213ENST00000557364 A8MUU9 505 aa4.76□□□□□ -1.65
CHD8-213ENST00000557364 CFAP54Q96N23 3096 aa4.76□□□□□ -1.65
CHD8-213ENST00000557364 C20orf166-AS1Q96NR2 134 aa4.75□□□□□ -1.65
CHD8-213ENST00000557364 NIPBLQ6KC79 2804 aaeCLIP4.75□□□□□ -1.651e-8■■■□□ 18.9
CHD8-213ENST00000557364 TENM4Q6N022 2769 aa4.75□□□□□ -1.65
CHD8-213ENST00000557364 FRYQ5TBA9 3013 aa4.74□□□□□ -1.65
CHD8-213ENST00000557364 USP34Q70CQ2 3546 aa4.73□□□□□ -1.65
CHD8-213ENST00000557364 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
CHD8-213ENST00000557364 RANBP2P49792 3224 aaKnown RBP4.71□□□□□ -1.66
CHD8-213ENST00000557364 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
CHD8-213ENST00000557364 PRUNE2Q8WUY3 3088 aa4.7□□□□□ -1.66
CHD8-213ENST00000557364 KRTAP13-2Q52LG2 175 aa4.69□□□□□ -1.66
CHD8-213ENST00000557364 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
CHD8-213ENST00000557364 MKI67P46013 3256 aaKnown RBP4.67□□□□□ -1.66
CHD8-213ENST00000557364 TNP1P09430 55 aa4.67□□□□□ -1.66
CHD8-213ENST00000557364 WDFY4Q6ZS81 3184 aa4.67□□□□□ -1.66
CHD8-213ENST00000557364 H3BS24 57 aa4.66□□□□□ -1.66
CHD8-213ENST00000557364 HTTP42858 3142 aa4.66□□□□□ -1.66
CHD8-213ENST00000557364 FRYLO94915 3013 aa4.65□□□□□ -1.66
CHD8-213ENST00000557364 LRBAP50851 2863 aa4.64□□□□□ -1.67
CHD8-213ENST00000557364 LAMA2P24043 3122 aaKnown RBP4.64□□□□□ -1.67
CHD8-213ENST00000557364 TENM1Q9UKZ4 2725 aa4.64□□□□□ -1.67
CHD8-213ENST00000557364 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
CHD8-213ENST00000557364 BRCA2P51587 3418 aa4.63□□□□□ -1.67
CHD8-213ENST00000557364 KRTAP11-1Q8IUC1 163 aa4.62□□□□□ -1.67
CHD8-213ENST00000557364 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
CHD8-213ENST00000557364 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
CHD8-213ENST00000557364 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
CHD8-213ENST00000557364 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
CHD8-213ENST00000557364 XIRP2A4UGR9 3374 aa4.59□□□□□ -1.67
CHD8-213ENST00000557364 CRYBG3Q68DQ2 2970 aa4.59□□□□□ -1.68
CHD8-213ENST00000557364 TENM3Q9P273 2699 aa4.58□□□□□ -1.68
CHD8-213ENST00000557364 KRTAP7-1Q8IUC3 87 aa4.58□□□□□ -1.68
CHD8-213ENST00000557364 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
CHD8-213ENST00000557364 LAMA3Q16787 3333 aa4.57□□□□□ -1.68
CHD8-213ENST00000557364 XP32Q5T750 250 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms