RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SCGB1C2P0DMR2 95 aa7.98□□□□□ -1.13
VPS33B-206ENST00000557358 ST20-AS1Q8NBB2 130 aa7.97□□□□□ -1.13
VPS33B-206ENST00000557358 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
VPS33B-206ENST00000557358 A0A1W2PPM0 123 aa7.96□□□□□ -1.14
VPS33B-206ENST00000557358 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
VPS33B-206ENST00000557358 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
VPS33B-206ENST00000557358 CLEC2BQ92478 149 aa7.95□□□□□ -1.14
VPS33B-206ENST00000557358 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
VPS33B-206ENST00000557358 FABP2P12104 132 aa7.94□□□□□ -1.14
VPS33B-206ENST00000557358 SPRR1BP22528 89 aa7.94□□□□□ -1.14
VPS33B-206ENST00000557358 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
VPS33B-206ENST00000557358 FP248Q71RG6 208 aaPredicted RBP7.94□□□□□ -1.14
VPS33B-206ENST00000557358 DEFB105AQ8NG35 78 aa7.94□□□□□ -1.14
VPS33B-206ENST00000557358 FAM218AQ96MZ4 157 aa7.94□□□□□ -1.14
VPS33B-206ENST00000557358 A0A1B0GX51 115 aa7.93□□□□□ -1.14
VPS33B-206ENST00000557358 hADV29S1A0JD25 119 aa7.93□□□□□ -1.14
VPS33B-206ENST00000557358 LST1O00453 97 aa7.93□□□□□ -1.14
VPS33B-206ENST00000557358 SNCGO76070 127 aa7.93□□□□□ -1.14
VPS33B-206ENST00000557358 TCL1BO95988 128 aa7.92□□□□□ -1.14
VPS33B-206ENST00000557358 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
VPS33B-206ENST00000557358 TRBV20-1A0A075B6N2 111 aa7.91□□□□□ -1.14
VPS33B-206ENST00000557358 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
VPS33B-206ENST00000557358 TRACP01848 142 aa7.9□□□□□ -1.14
VPS33B-206ENST00000557358 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
VPS33B-206ENST00000557358 SPCS1Q9Y6A9 102 aa7.9□□□□□ -1.14
VPS33B-206ENST00000557358 DNAL4O96015 105 aa7.89□□□□□ -1.15
VPS33B-206ENST00000557358 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
VPS33B-206ENST00000557358 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
VPS33B-206ENST00000557358 Q6ZQY7 126 aa7.88□□□□□ -1.15
VPS33B-206ENST00000557358 LPAP08519 4548 aa7.87□□□□□ -1.15
VPS33B-206ENST00000557358 F8WEM9 126 aa7.87□□□□□ -1.15
VPS33B-206ENST00000557358 IGLV5-48A0A075B6I7 105 aa7.86□□□□□ -1.15
VPS33B-206ENST00000557358 K7EP34 96 aa7.86□□□□□ -1.15
VPS33B-206ENST00000557358 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
VPS33B-206ENST00000557358 GTF2H5Q6ZYL4 71 aa7.84□□□□□ -1.15
VPS33B-206ENST00000557358 Q8N377 158 aa7.84□□□□□ -1.15
VPS33B-206ENST00000557358 ORMDL1Q9P0S3 153 aa7.84□□□□□ -1.15
VPS33B-206ENST00000557358 H3BMG7 143 aa7.83□□□□□ -1.16
VPS33B-206ENST00000557358 GHRHP01286 108 aa7.83□□□□□ -1.16
VPS33B-206ENST00000557358 CD164Q04900 197 aa7.83□□□□□ -1.16
VPS33B-206ENST00000557358 HRCT1Q6UXD1 115 aa7.83□□□□□ -1.16
VPS33B-206ENST00000557358 A0A1B0GV90 55 aa7.82□□□□□ -1.16
VPS33B-206ENST00000557358 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
VPS33B-206ENST00000557358 PPDPFLQ8WWR9 84 aa7.82□□□□□ -1.16
VPS33B-206ENST00000557358 A0A0U1RQV1 116 aa7.81□□□□□ -1.16
VPS33B-206ENST00000557358 C9JAW5 83 aa7.81□□□□□ -1.16
VPS33B-206ENST00000557358 H3BQ85 93 aa7.81□□□□□ -1.16
VPS33B-206ENST00000557358 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
VPS33B-206ENST00000557358 TMEM256-PLSCR3K7ERE1 68 aa7.78□□□□□ -1.16
VPS33B-206ENST00000557358 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
VPS33B-206ENST00000557358 H3BT86 120 aa7.77□□□□□ -1.17
VPS33B-206ENST00000557358 BAALC-AS2P0C853 105 aa7.77□□□□□ -1.17
VPS33B-206ENST00000557358 Q6JHZ5 121 aa7.77□□□□□ -1.17
VPS33B-206ENST00000557358 MTURNQ8N3F0 131 aa7.77□□□□□ -1.17
VPS33B-206ENST00000557358 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
VPS33B-206ENST00000557358 UBE2V1Q13404 147 aa7.74□□□□□ -1.17
VPS33B-206ENST00000557358 ANKRD29Q8N6D5 301 aa7.74□□□□□ -1.17
VPS33B-206ENST00000557358 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
VPS33B-206ENST00000557358 NDUFV3P56181 108 aaKnown RBP7.73□□□□□ -1.17
VPS33B-206ENST00000557358 Q5XG85 94 aa7.73□□□□□ -1.17
VPS33B-206ENST00000557358 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
VPS33B-206ENST00000557358 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
VPS33B-206ENST00000557358 F8W1H4 67 aa7.71□□□□□ -1.18
VPS33B-206ENST00000557358 IGLV8-61A0A075B6I0 122 aa7.69□□□□□ -1.18
VPS33B-206ENST00000557358 A0A1B0GV72 72 aa7.69□□□□□ -1.18
VPS33B-206ENST00000557358 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
VPS33B-206ENST00000557358 JMJD7-PLA2G4BH0Y9G9 81 aa7.67□□□□□ -1.18
VPS33B-206ENST00000557358 IGFL1Q6UW32 110 aa7.66□□□□□ -1.18
VPS33B-206ENST00000557358 TRBV7-7A0A0K0K1E9 115 aa7.65□□□□□ -1.18
VPS33B-206ENST00000557358 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
VPS33B-206ENST00000557358 ASB16-AS1Q495Z4 193 aa7.65□□□□□ -1.18
VPS33B-206ENST00000557358 C1orf195Q5TG92 126 aa7.64□□□□□ -1.19
VPS33B-206ENST00000557358 TEN1Q86WV5 123 aa7.64□□□□□ -1.19
VPS33B-206ENST00000557358 XP32Q5T750 250 aa7.63□□□□□ -1.19
VPS33B-206ENST00000557358 OBSCN-AS1Q96MR7 158 aa7.63□□□□□ -1.19
VPS33B-206ENST00000557358 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
VPS33B-206ENST00000557358 SS18L2Q9UHA2 77 aa7.63□□□□□ -1.19
VPS33B-206ENST00000557358 TRBV7-4A0A0J9YYF1 115 aa7.62□□□□□ -1.19
VPS33B-206ENST00000557358 C9orf92A6NGG3 77 aa7.62□□□□□ -1.19
VPS33B-206ENST00000557358 ETDBQ3ZM63 59 aa7.62□□□□□ -1.19
VPS33B-206ENST00000557358 C14orf132Q9NPU4 83 aa7.62□□□□□ -1.19
VPS33B-206ENST00000557358 LOC110117498A0A087WWA1 95 aa7.59□□□□□ -1.19
VPS33B-206ENST00000557358 PDE6GP18545 87 aa7.58□□□□□ -1.2
VPS33B-206ENST00000557358 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
VPS33B-206ENST00000557358 MUC2Q02817 5179 aa7.57□□□□□ -1.2
VPS33B-206ENST00000557358 CCKP06307 115 aa7.57□□□□□ -1.2
VPS33B-206ENST00000557358 Q6Q795 121 aa7.57□□□□□ -1.2
VPS33B-206ENST00000557358 Q6ZQT0 140 aa7.57□□□□□ -1.2
VPS33B-206ENST00000557358 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
VPS33B-206ENST00000557358 VPS25Q9BRG1 176 aa7.56□□□□□ -1.2
VPS33B-206ENST00000557358 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
VPS33B-206ENST00000557358 A0A087WSZ3 146 aa7.52□□□□□ -1.21
VPS33B-206ENST00000557358 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
VPS33B-206ENST00000557358 A0A1B0GW54 56 aa7.5□□□□□ -1.21
VPS33B-206ENST00000557358 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
VPS33B-206ENST00000557358 J3QR89 54 aa7.44□□□□□ -1.22
VPS33B-206ENST00000557358 ATP11AUNQ6ZP68 121 aa7.44□□□□□ -1.22
VPS33B-206ENST00000557358 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
VPS33B-206ENST00000557358 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
VPS33B-206ENST00000557358 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms