RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 J3QQQ9 107 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 K7ERJ3 54 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 BCE1O60756 84 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 TIMM17BO60830 172 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 IFITM1P13164 125 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 LGALS3P17931 250 aaKnown RBP2.74□□□□□ -1.97
ATXN3-239ENST00000556315 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
ATXN3-239ENST00000556315 FP248Q71RG6 208 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-239ENST00000556315 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 UBE2D4Q9Y2X8 147 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 COX6CP09669 75 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 MRPS36P82909 103 aaKnown RBP2.73□□□□□ -1.97
ATXN3-239ENST00000556315 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 RNASE13Q5GAN3 156 aaKnown RBP2.73□□□□□ -1.97
ATXN3-239ENST00000556315 TMEM170BQ5T4T1 132 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 AMELXQ99217 191 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 TIMM21Q9BVV7 248 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 SPANXCQ9NY87 97 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 ERG28Q9UKR5 140 aa2.73□□□□□ -1.97
ATXN3-239ENST00000556315 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 TINCRA0A1B0GVN0 87 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 PSMB2P49721 201 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 Q1RN00 199 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 Q6Q795 121 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 NAA38Q9BRA0 125 aaKnown RBP2.72□□□□□ -1.97
ATXN3-239ENST00000556315 DHRS4-AS1Q9P1J3 65 aa2.72□□□□□ -1.97
ATXN3-239ENST00000556315 TRBV10-2A0A0K0K1G8 114 aa2.71□□□□□ -1.98
ATXN3-239ENST00000556315 A0A0U1RRA0 63 aa2.71□□□□□ -1.98
ATXN3-239ENST00000556315 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
ATXN3-239ENST00000556315 H3BT86 120 aa2.71□□□□□ -1.98
ATXN3-239ENST00000556315 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-239ENST00000556315 MT1HP80294 61 aa2.71□□□□□ -1.98
ATXN3-239ENST00000556315 Q6ZUT4 128 aa2.71□□□□□ -1.98
ATXN3-239ENST00000556315 MRPL55Q7Z7F7 128 aaKnown RBP2.71□□□□□ -1.98
ATXN3-239ENST00000556315 SLC25A20O43772 301 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 TCL1BO95988 128 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 ACYP1P07311 99 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 UBE2AP49459 152 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 RPL39P62891 51 aaKnown RBP2.7□□□□□ -1.98
ATXN3-239ENST00000556315 HERVK_113P63121 156 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 SFTA2Q6UW10 78 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 C2orf82Q6UX34 121 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 MUSTN1Q8IVN3 82 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 FAM104AQ969W3 186 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 XAGE1AQ9HD64 81 aa2.7□□□□□ -1.98
ATXN3-239ENST00000556315 SPINK8P0C7L1 97 aa2.69□□□□□ -1.98
ATXN3-239ENST00000556315 TSPEAR-AS2P59090 65 aa2.69□□□□□ -1.98
ATXN3-239ENST00000556315 CKS1BP61024 79 aa2.69□□□□□ -1.98
ATXN3-239ENST00000556315 LINC01561Q8N1V8 128 aa2.69□□□□□ -1.98
ATXN3-239ENST00000556315 GEMIN7Q9H840 131 aaKnown RBP2.69□□□□□ -1.98
ATXN3-239ENST00000556315 NDUFA12Q9UI09 145 aa2.69□□□□□ -1.98
ATXN3-239ENST00000556315 C9JAW5 83 aa2.68□□□□□ -1.98
ATXN3-239ENST00000556315 LST1O00453 97 aa2.68□□□□□ -1.98
ATXN3-239ENST00000556315 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
ATXN3-239ENST00000556315 C6orf226Q5I0X4 101 aa2.68□□□□□ -1.98
ATXN3-239ENST00000556315 DAND5Q8N907 189 aa2.68□□□□□ -1.98
ATXN3-239ENST00000556315 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
ATXN3-239ENST00000556315 SNCGO76070 127 aa2.67□□□□□ -1.98
ATXN3-239ENST00000556315 SPINK1P00995 79 aa2.67□□□□□ -1.98
ATXN3-239ENST00000556315 TRACP01848 142 aa2.67□□□□□ -1.98
ATXN3-239ENST00000556315 C3orf22Q8N5N4 141 aa2.67□□□□□ -1.98
ATXN3-239ENST00000556315 TRAV13-2A0A0B4J235 113 aa2.66□□□□□ -1.98
ATXN3-239ENST00000556315 M0R2T5 61 aa2.66□□□□□ -1.98
ATXN3-239ENST00000556315 Q8IZM0 81 aa2.66□□□□□ -1.98
ATXN3-239ENST00000556315 TOMM7Q9P0U1 55 aa2.66□□□□□ -1.98
ATXN3-239ENST00000556315 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 H0YGX0 51 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 PRLHP81277 87 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 FAM19A1Q7Z5A9 133 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 NKAPP1Q8N9T2 125 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 LINC00308Q8TCZ7 52 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
ATXN3-239ENST00000556315 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 A0A1B0GX51 115 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 CXCL5P42830 114 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 MEIG1Q5JSS6 88 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 ZNF625Q96I27 306 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-239ENST00000556315 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
ATXN3-239ENST00000556315 IGLV8-61A0A075B6I0 122 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 TEX49A0A1B0GTD5 131 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 H3BQ85 93 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms