RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 REV3LO60673 3130 aa0.86□□□□□ -2.27
CASC1-208ENST00000555240 GCC2Q8IWJ2 1684 aa0.85□□□□□ -2.27
CASC1-208ENST00000555240 CHD9Q3L8U1 2897 aa0.85□□□□□ -2.27
CASC1-208ENST00000555240 SMIM2Q9BVW6 85 aa0.85□□□□□ -2.27
CASC1-208ENST00000555240 CLTCL1P53675 1640 aa0.85□□□□□ -2.27
CASC1-208ENST00000555240 CELSR2Q9HCU4 2923 aa0.85□□□□□ -2.27
CASC1-208ENST00000555240 SNRPGP62308 76 aaKnown RBP0.84□□□□□ -2.27
CASC1-208ENST00000555240 TENM1Q9UKZ4 2725 aa0.83□□□□□ -2.28
CASC1-208ENST00000555240 CACNA1HO95180 2353 aa0.83□□□□□ -2.28
CASC1-208ENST00000555240 CELSR1Q9NYQ6 3014 aa0.82□□□□□ -2.28
CASC1-208ENST00000555240 DSPP15924 2871 aaKnown RBP0.81□□□□□ -2.28
CASC1-208ENST00000555240 NDUFA1O15239 70 aa0.81□□□□□ -2.28
CASC1-208ENST00000555240 WT1-ASQ06250 92 aa0.81□□□□□ -2.28
CASC1-208ENST00000555240 WFDC10BQ8IUB3 73 aa0.81□□□□□ -2.28
CASC1-208ENST00000555240 KNL1Q8NG31 2342 aa0.81□□□□□ -2.28
CASC1-208ENST00000555240 IGF2RP11717 2491 aa0.8□□□□□ -2.28
CASC1-208ENST00000555240 KAAG1Q9UBP8 84 aa0.8□□□□□ -2.28
CASC1-208ENST00000555240 POLQO75417 2590 aa0.8□□□□□ -2.28
CASC1-208ENST00000555240 TTC28Q96AY4 2481 aa0.79□□□□□ -2.28
CASC1-208ENST00000555240 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
CASC1-208ENST00000555240 PKDREJQ9NTG1 2253 aa0.79□□□□□ -2.28
CASC1-208ENST00000555240 ANK2Q01484 3957 aa0.79□□□□□ -2.28
CASC1-208ENST00000555240 PRKDCP78527 4128 aaKnown RBP0.79□□□□□ -2.28
CASC1-208ENST00000555240 FRAS1Q86XX4 4008 aa0.78□□□□□ -2.28
CASC1-208ENST00000555240 FBN2P35556 2912 aa0.78□□□□□ -2.28
CASC1-208ENST00000555240 S4R3F8 94 aa0.78□□□□□ -2.28
CASC1-208ENST00000555240 PCNX1Q96RV3 2341 aa0.78□□□□□ -2.28
CASC1-208ENST00000555240 SPTBN2O15020 2390 aa0.78□□□□□ -2.28
CASC1-208ENST00000555240 WNK2Q9Y3S1 2297 aa0.77□□□□□ -2.29
CASC1-208ENST00000555240 TRANK1O15050 2925 aa0.77□□□□□ -2.29
CASC1-208ENST00000555240 PRLHP81277 87 aa0.77□□□□□ -2.29
CASC1-208ENST00000555240 DEFB109BQ30KR1 87 aa0.77□□□□□ -2.29
CASC1-208ENST00000555240 SPTBN1Q01082 2364 aaKnown RBP0.76□□□□□ -2.29
CASC1-208ENST00000555240 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
CASC1-208ENST00000555240 GVINP1Q7Z2Y8 2422 aa0.76□□□□□ -2.29
CASC1-208ENST00000555240 VWFP04275 2813 aa0.75□□□□□ -2.29
CASC1-208ENST00000555240 A0A0C4DFX4 3053 aa0.75□□□□□ -2.29
CASC1-208ENST00000555240 DEFB106AQ8N104 65 aa0.75□□□□□ -2.29
CASC1-208ENST00000555240 CSMD3Q7Z407 3707 aa0.75□□□□□ -2.29
CASC1-208ENST00000555240 F8P00451 2351 aa0.74□□□□□ -2.29
CASC1-208ENST00000555240 PRRC2CQ9Y520 2896 aaKnown RBP0.74□□□□□ -2.29
CASC1-208ENST00000555240 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
CASC1-208ENST00000555240 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
CASC1-208ENST00000555240 LYSTQ99698 3801 aa0.73□□□□□ -2.29
CASC1-208ENST00000555240 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
CASC1-208ENST00000555240 MMP24-AS1A0A0U1RRL7 71 aa0.73□□□□□ -2.29
CASC1-208ENST00000555240 PDE4DIPQ5VU43 2346 aa0.73□□□□□ -2.29
CASC1-208ENST00000555240 NCOR1O75376 2440 aa0.73□□□□□ -2.29
CASC1-208ENST00000555240 CSPG4Q6UVK1 2322 aa0.72□□□□□ -2.29
CASC1-208ENST00000555240 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
CASC1-208ENST00000555240 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
CASC1-208ENST00000555240 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
CASC1-208ENST00000555240 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
CASC1-208ENST00000555240 OTOGQ6ZRI0 2925 aa0.71□□□□□ -2.29
CASC1-208ENST00000555240 TENM4Q6N022 2769 aa0.71□□□□□ -2.3
CASC1-208ENST00000555240 IGLV5-48A0A075B6I7 105 aa0.71□□□□□ -2.3
CASC1-208ENST00000555240 H3BUA1 57 aa0.71□□□□□ -2.3
CASC1-208ENST00000555240 TPRP12270 2363 aaKnown RBP0.71□□□□□ -2.3
CASC1-208ENST00000555240 AKAP13Q12802 2813 aa0.71□□□□□ -2.3
CASC1-208ENST00000555240 SACSQ9NZJ4 4579 aa0.71□□□□□ -2.3
CASC1-208ENST00000555240 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
CASC1-208ENST00000555240 SMR3AQ99954 134 aa0.7□□□□□ -2.3
CASC1-208ENST00000555240 PDZD2O15018 2839 aa0.7□□□□□ -2.3
CASC1-208ENST00000555240 RPL39P62891 51 aaKnown RBP0.69□□□□□ -2.3
CASC1-208ENST00000555240 ABCA2Q9BZC7 2435 aa0.68□□□□□ -2.3
CASC1-208ENST00000555240 APCP25054 2843 aa0.68□□□□□ -2.3
CASC1-208ENST00000555240 ATRQ13535 2644 aa0.68□□□□□ -2.3
CASC1-208ENST00000555240 SPINK6Q6UWN8 80 aa0.68□□□□□ -2.3
CASC1-208ENST00000555240 TNRC18O15417 2968 aaPredicted RBP0.68□□□□□ -2.3
CASC1-208ENST00000555240 VPS13DQ5THJ4 4388 aa0.67□□□□□ -2.3
CASC1-208ENST00000555240 SPINK1P00995 79 aa0.67□□□□□ -2.3
CASC1-208ENST00000555240 POLR2KP53803 58 aaKnown RBP0.67□□□□□ -2.3
CASC1-208ENST00000555240 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
CASC1-208ENST00000555240 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
CASC1-208ENST00000555240 TNXBP22105 4242 aa0.67□□□□□ -2.3
CASC1-208ENST00000555240 UBR5O95071 2799 aaPredicted RBP0.67□□□□□ -2.3
CASC1-208ENST00000555240 BDP1A6H8Y1 2624 aa0.67□□□□□ -2.3
CASC1-208ENST00000555240 DNAH11Q96DT5 4516 aa0.66□□□□□ -2.3
CASC1-208ENST00000555240 VPS13BQ7Z7G8 4022 aa0.66□□□□□ -2.3
CASC1-208ENST00000555240 DEFB131AP59861 70 aa0.66□□□□□ -2.3
CASC1-208ENST00000555240 DEFB135Q30KP9 77 aa0.66□□□□□ -2.3
CASC1-208ENST00000555240 RPL39LQ96EH5 51 aaKnown RBP0.66□□□□□ -2.3
CASC1-208ENST00000555240 CHD7Q9P2D1 2997 aa0.66□□□□□ -2.3
CASC1-208ENST00000555240 HUWE1Q7Z6Z7 4374 aaKnown RBP0.66□□□□□ -2.3
CASC1-208ENST00000555240 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
CASC1-208ENST00000555240 MYCBP2O75592 4640 aa0.66□□□□□ -2.3
CASC1-208ENST00000555240 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
CASC1-208ENST00000555240 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
CASC1-208ENST00000555240 EP300Q09472 2414 aaPredicted RBP0.64□□□□□ -2.31
CASC1-208ENST00000555240 M0R2T5 61 aa0.64□□□□□ -2.31
CASC1-208ENST00000555240 PRM1P04553 51 aa0.64□□□□□ -2.31
CASC1-208ENST00000555240 LEAP2Q969E1 77 aa0.64□□□□□ -2.31
CASC1-208ENST00000555240 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
CASC1-208ENST00000555240 CLPSL2Q6UWE3 100 aa0.63□□□□□ -2.31
CASC1-208ENST00000555240 KMT2AQ03164 3969 aa0.63□□□□□ -2.31
CASC1-208ENST00000555240 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
CASC1-208ENST00000555240 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
CASC1-208ENST00000555240 ARHGAP5-AS1Q96IT6 56 aa0.62□□□□□ -2.31
CASC1-208ENST00000555240 NOP10Q9NPE3 64 aaKnown RBP0.62□□□□□ -2.31
CASC1-208ENST00000555240 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms