RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
CASC1-208ENST00000555240 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
CASC1-208ENST00000555240 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
CASC1-208ENST00000555240 PHF23Q9BUL5 403 aaPredicted RBP15.19■□□□□ 0.02
CASC1-208ENST00000555240 FOXD1Q16676 465 aa14.47□□□□□ -0.09
CASC1-208ENST00000555240 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
CASC1-208ENST00000555240 MSH5O43196 834 aa13.6□□□□□ -0.23
CASC1-208ENST00000555240 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
CASC1-208ENST00000555240 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
CASC1-208ENST00000555240 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
CASC1-208ENST00000555240 ADRA2BP18089 450 aa13.19□□□□□ -0.3
CASC1-208ENST00000555240 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
CASC1-208ENST00000555240 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
CASC1-208ENST00000555240 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
CASC1-208ENST00000555240 CACNB1Q02641 598 aaPredicted RBP11.93□□□□□ -0.5
CASC1-208ENST00000555240 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
CASC1-208ENST00000555240 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
CASC1-208ENST00000555240 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
CASC1-208ENST00000555240 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
CASC1-208ENST00000555240 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
CASC1-208ENST00000555240 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
CASC1-208ENST00000555240 KCNA4P22459 653 aa11.45□□□□□ -0.58
CASC1-208ENST00000555240 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
CASC1-208ENST00000555240 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
CASC1-208ENST00000555240 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
CASC1-208ENST00000555240 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
CASC1-208ENST00000555240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
CASC1-208ENST00000555240 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
CASC1-208ENST00000555240 POTEHQ6S545 545 aa10.87□□□□□ -0.67
CASC1-208ENST00000555240 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
CASC1-208ENST00000555240 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
CASC1-208ENST00000555240 DSG3P32926 999 aa10.76□□□□□ -0.69
CASC1-208ENST00000555240 CAPN15O75808 1086 aa10.71□□□□□ -0.69
CASC1-208ENST00000555240 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
CASC1-208ENST00000555240 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
CASC1-208ENST00000555240 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
CASC1-208ENST00000555240 ZBTB22O15209 634 aa10.5□□□□□ -0.73
CASC1-208ENST00000555240 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
CASC1-208ENST00000555240 ABCB7O75027 752 aa10.48□□□□□ -0.73
CASC1-208ENST00000555240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
CASC1-208ENST00000555240 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
CASC1-208ENST00000555240 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
CASC1-208ENST00000555240 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
CASC1-208ENST00000555240 APLP2Q06481 763 aa10.4□□□□□ -0.74
CASC1-208ENST00000555240 CSRNP3Q8WYN3 585 aa10.39□□□□□ -0.75
CASC1-208ENST00000555240 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
CASC1-208ENST00000555240 ATXN8OSP0DMR3 200 aa10.22□□□□□ -0.77
CASC1-208ENST00000555240 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
CASC1-208ENST00000555240 CHRDL2Q6WN34 429 aa10.18□□□□□ -0.78
CASC1-208ENST00000555240 ATF5Q9Y2D1 282 aaPredicted RBP10.17□□□□□ -0.78
CASC1-208ENST00000555240 POLA2Q14181 598 aa10.11□□□□□ -0.79
CASC1-208ENST00000555240 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
CASC1-208ENST00000555240 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
CASC1-208ENST00000555240 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
CASC1-208ENST00000555240 PIP4P2Q8N4L2 257 aa9.88□□□□□ -0.83
CASC1-208ENST00000555240 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
CASC1-208ENST00000555240 FBLN2P98095 1184 aa9.84□□□□□ -0.83
CASC1-208ENST00000555240 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
CASC1-208ENST00000555240 HAX1O00165 279 aa9.79□□□□□ -0.84
CASC1-208ENST00000555240 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
CASC1-208ENST00000555240 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
CASC1-208ENST00000555240 MKRN4PQ13434 485 aaPredicted RBP9.72□□□□□ -0.85
CASC1-208ENST00000555240 EVX2Q03828 476 aa9.71□□□□□ -0.86
CASC1-208ENST00000555240 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
CASC1-208ENST00000555240 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
CASC1-208ENST00000555240 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
CASC1-208ENST00000555240 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
CASC1-208ENST00000555240 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
CASC1-208ENST00000555240 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
CASC1-208ENST00000555240 SSUH2Q9Y2M2 353 aa9.47□□□□□ -0.89
CASC1-208ENST00000555240 C19orf67A6NJJ6 358 aa9.46□□□□□ -0.9
CASC1-208ENST00000555240 FKBP8Q14318 412 aa9.45□□□□□ -0.9
CASC1-208ENST00000555240 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
CASC1-208ENST00000555240 PABPN1Q86U42 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
CASC1-208ENST00000555240 GABBR2O75899 941 aa9.42□□□□□ -0.9
CASC1-208ENST00000555240 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
CASC1-208ENST00000555240 LHX8Q68G74 356 aa9.38□□□□□ -0.91
CASC1-208ENST00000555240 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
CASC1-208ENST00000555240 PROM2Q8N271 834 aa9.27□□□□□ -0.93
CASC1-208ENST00000555240 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
CASC1-208ENST00000555240 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
CASC1-208ENST00000555240 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
CASC1-208ENST00000555240 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
CASC1-208ENST00000555240 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
CASC1-208ENST00000555240 FARP1Q9Y4F1 1045 aaPredicted RBP9.14□□□□□ -0.95
CASC1-208ENST00000555240 PLSCR2Q9NRY7 297 aa9.1□□□□□ -0.95
CASC1-208ENST00000555240 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
CASC1-208ENST00000555240 MIER1Q8N108 512 aa9.07□□□□□ -0.96
CASC1-208ENST00000555240 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
CASC1-208ENST00000555240 DCBLD2Q96PD2 775 aa9.05□□□□□ -0.96
CASC1-208ENST00000555240 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
CASC1-208ENST00000555240 CLCN6P51797 869 aa9.03□□□□□ -0.96
CASC1-208ENST00000555240 VASPP50552 380 aaPredicted RBP9.01□□□□□ -0.97
CASC1-208ENST00000555240 ZNF579Q8NAF0 562 aaKnown RBP9□□□□□ -0.97
CASC1-208ENST00000555240 ZRANB1Q9UGI0 708 aa8.99□□□□□ -0.97
CASC1-208ENST00000555240 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
CASC1-208ENST00000555240 OTUD5Q96G74 571 aa8.96□□□□□ -0.98
CASC1-208ENST00000555240 ZBTB47Q9UFB7 747 aaPredicted RBP8.96□□□□□ -0.98
CASC1-208ENST00000555240 POTEB2H3BUK9 544 aa8.95□□□□□ -0.98
CASC1-208ENST00000555240 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms