RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C9orf153Q5TBE3 101 aa7.06□□□□□ -1.28
SYNE2-214ENST00000554928 CEND1Q8N111 149 aa7.06□□□□□ -1.28
SYNE2-214ENST00000554928 Q1RN00 199 aa7.05□□□□□ -1.28
SYNE2-214ENST00000554928 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
SYNE2-214ENST00000554928 TAL2Q16559 108 aa7.04□□□□□ -1.28
SYNE2-214ENST00000554928 SPAG11AQ6PDA7 123 aa7.04□□□□□ -1.28
SYNE2-214ENST00000554928 LINC00575Q6W349 94 aa7.04□□□□□ -1.28
SYNE2-214ENST00000554928 SSBP3-AS1Q7Z2R9 100 aa7.04□□□□□ -1.28
SYNE2-214ENST00000554928 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
SYNE2-214ENST00000554928 A0A0B4J2C4 111 aa7.03□□□□□ -1.28
SYNE2-214ENST00000554928 Q8N377 158 aa7.03□□□□□ -1.28
SYNE2-214ENST00000554928 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
SYNE2-214ENST00000554928 TEX49A0A1B0GTD5 131 aa7.02□□□□□ -1.29
SYNE2-214ENST00000554928 RAB37Q96AX2 223 aa7.02□□□□□ -1.29
SYNE2-214ENST00000554928 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
SYNE2-214ENST00000554928 VAMP3Q15836 100 aa7.01□□□□□ -1.29
SYNE2-214ENST00000554928 LAMTOR3Q9UHA4 124 aa7.01□□□□□ -1.29
SYNE2-214ENST00000554928 K7ERJ3 54 aa7□□□□□ -1.29
SYNE2-214ENST00000554928 SPINK1P00995 79 aa7□□□□□ -1.29
SYNE2-214ENST00000554928 HRCT1Q6UXD1 115 aa7□□□□□ -1.29
SYNE2-214ENST00000554928 Q6ZQY7 126 aa7□□□□□ -1.29
SYNE2-214ENST00000554928 PRO1933Q9H354 126 aa7□□□□□ -1.29
SYNE2-214ENST00000554928 hADV29S1A0JD25 119 aa6.99□□□□□ -1.29
SYNE2-214ENST00000554928 HSD52Q0P140 79 aa6.99□□□□□ -1.29
SYNE2-214ENST00000554928 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
SYNE2-214ENST00000554928 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
SYNE2-214ENST00000554928 UQCR10Q9UDW1 63 aa6.99□□□□□ -1.29
SYNE2-214ENST00000554928 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
SYNE2-214ENST00000554928 IGLV7-46A0A075B6I9 117 aa6.98□□□□□ -1.29
SYNE2-214ENST00000554928 SLC25A20O43772 301 aa6.98□□□□□ -1.29
SYNE2-214ENST00000554928 PRO1854Q9UHT4 67 aa6.98□□□□□ -1.29
SYNE2-214ENST00000554928 BVES-AS1Q5T3Y7 98 aa6.96□□□□□ -1.3
SYNE2-214ENST00000554928 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
SYNE2-214ENST00000554928 TRIAP1O43715 76 aa6.94□□□□□ -1.3
SYNE2-214ENST00000554928 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
SYNE2-214ENST00000554928 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-214ENST00000554928 CLEC2BQ92478 149 aa6.92□□□□□ -1.3
SYNE2-214ENST00000554928 H0YGX0 51 aa6.91□□□□□ -1.3
SYNE2-214ENST00000554928 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
SYNE2-214ENST00000554928 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-214ENST00000554928 A0A1B0GV90 55 aa6.9□□□□□ -1.3
SYNE2-214ENST00000554928 M0R143 59 aa6.9□□□□□ -1.3
SYNE2-214ENST00000554928 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
SYNE2-214ENST00000554928 IGLV8-61A0A075B6I0 122 aa6.88□□□□□ -1.31
SYNE2-214ENST00000554928 H3BUT2 72 aa6.88□□□□□ -1.31
SYNE2-214ENST00000554928 CD164Q04900 197 aa6.88□□□□□ -1.31
SYNE2-214ENST00000554928 IGFL1Q6UW32 110 aa6.88□□□□□ -1.31
SYNE2-214ENST00000554928 F8WEM9 126 aa6.87□□□□□ -1.31
SYNE2-214ENST00000554928 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
SYNE2-214ENST00000554928 CDIP1Q9H305 208 aa6.87□□□□□ -1.31
SYNE2-214ENST00000554928 MUC2Q02817 5179 aa6.87□□□□□ -1.31
SYNE2-214ENST00000554928 H3BS24 57 aa6.86□□□□□ -1.31
SYNE2-214ENST00000554928 PSMB2P49721 201 aa6.86□□□□□ -1.31
SYNE2-214ENST00000554928 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
SYNE2-214ENST00000554928 SNHG12Q9BXW3 62 aa6.86□□□□□ -1.31
SYNE2-214ENST00000554928 PPDPFLQ8WWR9 84 aa6.85□□□□□ -1.31
SYNE2-214ENST00000554928 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
SYNE2-214ENST00000554928 A0A1B0GX51 115 aa6.84□□□□□ -1.31
SYNE2-214ENST00000554928 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
SYNE2-214ENST00000554928 C1orf195Q5TG92 126 aa6.83□□□□□ -1.32
SYNE2-214ENST00000554928 Q5XG85 94 aa6.83□□□□□ -1.32
SYNE2-214ENST00000554928 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
SYNE2-214ENST00000554928 Q6JHZ5 121 aa6.82□□□□□ -1.32
SYNE2-214ENST00000554928 FABP2P12104 132 aa6.81□□□□□ -1.32
SYNE2-214ENST00000554928 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
SYNE2-214ENST00000554928 A0A1B0GV72 72 aa6.8□□□□□ -1.32
SYNE2-214ENST00000554928 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
SYNE2-214ENST00000554928 SNCGO76070 127 aa6.8□□□□□ -1.32
SYNE2-214ENST00000554928 COX6CP09669 75 aa6.79□□□□□ -1.32
SYNE2-214ENST00000554928 BATFQ16520 125 aa6.79□□□□□ -1.32
SYNE2-214ENST00000554928 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
SYNE2-214ENST00000554928 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
SYNE2-214ENST00000554928 H3BMG7 143 aa6.78□□□□□ -1.32
SYNE2-214ENST00000554928 LST1O00453 97 aa6.78□□□□□ -1.32
SYNE2-214ENST00000554928 SCGB1C2P0DMR2 95 aa6.78□□□□□ -1.32
SYNE2-214ENST00000554928 ORMDL1Q9P0S3 153 aa6.78□□□□□ -1.32
SYNE2-214ENST00000554928 FAT4Q6V0I7 4981 aa6.78□□□□□ -1.32
SYNE2-214ENST00000554928 DNAL4O96015 105 aa6.77□□□□□ -1.33
SYNE2-214ENST00000554928 KRTAP4-11Q9BYQ6 195 aa6.76□□□□□ -1.33
SYNE2-214ENST00000554928 A0A1W2PNM2 257 aa6.75□□□□□ -1.33
SYNE2-214ENST00000554928 TCL1BO95988 128 aa6.75□□□□□ -1.33
SYNE2-214ENST00000554928 TRACP01848 142 aa6.75□□□□□ -1.33
SYNE2-214ENST00000554928 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
SYNE2-214ENST00000554928 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
SYNE2-214ENST00000554928 Q6Q795 121 aa6.73□□□□□ -1.33
SYNE2-214ENST00000554928 A0A087WSZ3 146 aa6.71□□□□□ -1.34
SYNE2-214ENST00000554928 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.34
SYNE2-214ENST00000554928 LCE5AQ5TCM9 118 aa6.71□□□□□ -1.34
SYNE2-214ENST00000554928 TEN1Q86WV5 123 aa6.71□□□□□ -1.34
SYNE2-214ENST00000554928 UBE2V1Q13404 147 aa6.7□□□□□ -1.34
SYNE2-214ENST00000554928 BAALC-AS2P0C853 105 aa6.69□□□□□ -1.34
SYNE2-214ENST00000554928 ANKRD29Q8N6D5 301 aa6.69□□□□□ -1.34
SYNE2-214ENST00000554928 Q96NJ1 140 aa6.69□□□□□ -1.34
SYNE2-214ENST00000554928 H3BQ85 93 aa6.68□□□□□ -1.34
SYNE2-214ENST00000554928 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
SYNE2-214ENST00000554928 ATXN8Q156A1 80 aa6.67□□□□□ -1.34
SYNE2-214ENST00000554928 TRBV7-4A0A0J9YYF1 115 aa6.66□□□□□ -1.34
SYNE2-214ENST00000554928 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
SYNE2-214ENST00000554928 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
SYNE2-214ENST00000554928 PCOTHQ58A44 107 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms