RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 RGPD2P0DJD1 1756 aa-1.77□□□□□ -2.69
PCNX1-208ENST00000554707 DNAH17Q9UFH2 4485 aa-1.77□□□□□ -2.69
PCNX1-208ENST00000554707 C5orf42Q9H799 3197 aa-1.77□□□□□ -2.69
PCNX1-208ENST00000554707 MYO15AQ9UKN7 3530 aa-1.77□□□□□ -2.69
PCNX1-208ENST00000554707 TLN1Q9Y490 2541 aaKnown RBP-1.77□□□□□ -2.69
PCNX1-208ENST00000554707 LRRC7Q96NW7 1537 aa-1.77□□□□□ -2.69
PCNX1-208ENST00000554707 TRRAPQ9Y4A5 3859 aa-1.78□□□□□ -2.69
PCNX1-208ENST00000554707 DMXL2Q8TDJ6 3036 aa-1.78□□□□□ -2.69
PCNX1-208ENST00000554707 C3orf79P0CE67 100 aa-1.78□□□□□ -2.69
PCNX1-208ENST00000554707 LINC00158P58513 81 aa-1.78□□□□□ -2.69
PCNX1-208ENST00000554707 PLGLAQ15195 96 aa-1.79□□□□□ -2.7
PCNX1-208ENST00000554707 DPY30Q9C005 99 aa-1.79□□□□□ -2.7
PCNX1-208ENST00000554707 C4AP0C0L4 1744 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 C4BP0C0L5 1744 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 LRBAP50851 2863 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 ADGRG4Q8IZF6 3080 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 MT1EP04732 61 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 WFDC9Q8NEX5 89 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 MT1LQ93083 61 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 CRYBG1Q9Y4K1 1723 aa-1.8□□□□□ -2.7
PCNX1-208ENST00000554707 FAM186AA6NE01 2351 aa-1.81□□□□□ -2.7
PCNX1-208ENST00000554707 SARNPP82979 210 aaKnown RBP-1.81□□□□□ -2.7
PCNX1-208ENST00000554707 DEFB110Q30KQ9 67 aa-1.81□□□□□ -2.7
PCNX1-208ENST00000554707 BOD1L1Q8NFC6 3051 aa-1.82□□□□□ -2.7
PCNX1-208ENST00000554707 CYB5AP00167 134 aa-1.82□□□□□ -2.7
PCNX1-208ENST00000554707 KRTAP19-5Q3LI72 72 aa-1.82□□□□□ -2.7
PCNX1-208ENST00000554707 C14orf144Q96I85 54 aa-1.82□□□□□ -2.7
PCNX1-208ENST00000554707 ATMQ13315 3056 aa-1.82□□□□□ -2.7
PCNX1-208ENST00000554707 DNAH8Q96JB1 4490 aa-1.82□□□□□ -2.7
PCNX1-208ENST00000554707 QSER1Q2KHR3 1735 aa-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 DNAH10Q8IVF4 4471 aa-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 HMGN2P05204 90 aaKnown RBP-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 S100PP25815 95 aa-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 PRLHP81277 87 aa-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 RGPD8O14715 1765 aaPredicted RBP-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 RGPD5Q99666 1765 aa-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 FYCO1Q9BQS8 1478 aa-1.83□□□□□ -2.7
PCNX1-208ENST00000554707 ALKQ9UM73 1620 aa-1.84□□□□□ -2.7
PCNX1-208ENST00000554707 TRAV21A0A0B4J279 112 aa-1.84□□□□□ -2.7
PCNX1-208ENST00000554707 SMIM11AP58511 58 aa-1.84□□□□□ -2.7
PCNX1-208ENST00000554707 PKD1L3Q7Z443 1732 aa-1.84□□□□□ -2.7
PCNX1-208ENST00000554707 TLN2Q9Y4G6 2542 aa-1.84□□□□□ -2.7
PCNX1-208ENST00000554707 MAP3K1Q13233 1512 aa-1.85□□□□□ -2.71
PCNX1-208ENST00000554707 ATP6V1G2-DDX39BF2Z307 99 aa-1.85□□□□□ -2.71
PCNX1-208ENST00000554707 PEA15Q15121 130 aa-1.85□□□□□ -2.71
PCNX1-208ENST00000554707 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.86□□□□□ -2.71
PCNX1-208ENST00000554707 TEX14Q8IWB6 1497 aa-1.86□□□□□ -2.71
PCNX1-208ENST00000554707 CEP290O15078 2479 aa-1.86□□□□□ -2.71
PCNX1-208ENST00000554707 SMR3BP02814 79 aaPredicted RBP-1.86□□□□□ -2.71
PCNX1-208ENST00000554707 TCEAL7Q9BRU2 100 aa-1.86□□□□□ -2.71
PCNX1-208ENST00000554707 NCMAPQ5T1S8 102 aa-1.88□□□□□ -2.71
PCNX1-208ENST00000554707 ATP7BP35670 1465 aa-1.88□□□□□ -2.71
PCNX1-208ENST00000554707 CLTCQ00610 1675 aaKnown RBP-1.89□□□□□ -2.71
PCNX1-208ENST00000554707 SCN11AQ9UI33 1791 aa-1.89□□□□□ -2.71
PCNX1-208ENST00000554707 RBP2P50120 134 aa-1.89□□□□□ -2.71
PCNX1-208ENST00000554707 BPTFQ12830 3046 aa-1.89□□□□□ -2.71
PCNX1-208ENST00000554707 CNTLNQ9NXG0 1405 aa-1.9□□□□□ -2.71
PCNX1-208ENST00000554707 EPRSP07814 1512 aaKnown RBP-1.9□□□□□ -2.71
PCNX1-208ENST00000554707 SPTBN5Q9NRC6 3674 aaKnown RBP-1.91□□□□□ -2.71
PCNX1-208ENST00000554707 ATP10BO94823 1461 aa-1.91□□□□□ -2.72
PCNX1-208ENST00000554707 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.91□□□□□ -2.72
PCNX1-208ENST00000554707 RGPD1P0DJD0 1748 aa-1.91□□□□□ -2.72
PCNX1-208ENST00000554707 ACYP1P07311 99 aa-1.92□□□□□ -2.72
PCNX1-208ENST00000554707 ACBD7Q8N6N7 88 aa-1.92□□□□□ -2.72
PCNX1-208ENST00000554707 C20orf78Q9BR46 151 aa-1.92□□□□□ -2.72
PCNX1-208ENST00000554707 USP32Q8NFA0 1604 aa-1.92□□□□□ -2.72
PCNX1-208ENST00000554707 PRUNE2Q8WUY3 3088 aa-1.92□□□□□ -2.72
PCNX1-208ENST00000554707 FANCAO15360 1455 aa-1.93□□□□□ -2.72
PCNX1-208ENST00000554707 NEXMIFQ5QGS0 1516 aa-1.93□□□□□ -2.72
PCNX1-208ENST00000554707 RANBP2P49792 3224 aaKnown RBP-1.93□□□□□ -2.72
PCNX1-208ENST00000554707 PLXNC1O60486 1568 aa-1.93□□□□□ -2.72
PCNX1-208ENST00000554707 IFI6P09912 130 aa-1.94□□□□□ -2.72
PCNX1-208ENST00000554707 DEFB130BP0DP73 79 aa-1.94□□□□□ -2.72
PCNX1-208ENST00000554707 DEFB130AP0DP74 79 aa-1.94□□□□□ -2.72
PCNX1-208ENST00000554707 DEFB106AQ8N104 65 aa-1.94□□□□□ -2.72
PCNX1-208ENST00000554707 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.94□□□□□ -2.72
PCNX1-208ENST00000554707 MYH4Q9Y623 1939 aa-1.95□□□□□ -2.72
PCNX1-208ENST00000554707 CSMD2Q7Z408 3487 aa-1.95□□□□□ -2.72
PCNX1-208ENST00000554707 GYPAP02724 150 aa-1.95□□□□□ -2.72
PCNX1-208ENST00000554707 PLIN4Q96Q06 1357 aa-1.96□□□□□ -2.72
PCNX1-208ENST00000554707 CDC42BPGQ6DT37 1551 aa-1.96□□□□□ -2.72
PCNX1-208ENST00000554707 MYMXA0A1B0GTQ4 84 aa-1.96□□□□□ -2.72
PCNX1-208ENST00000554707 M0R143 59 aa-1.96□□□□□ -2.72
PCNX1-208ENST00000554707 FREM2Q5SZK8 3169 aa-1.96□□□□□ -2.72
PCNX1-208ENST00000554707 NDUFB1O75438 58 aa-1.97□□□□□ -2.72
PCNX1-208ENST00000554707 MT1FP04733 61 aa-1.97□□□□□ -2.72
PCNX1-208ENST00000554707 IAPPP10997 89 aa-1.97□□□□□ -2.72
PCNX1-208ENST00000554707 KRTAP8-1Q8IUC2 63 aa-1.98□□□□□ -2.73
PCNX1-208ENST00000554707 SPTAN1Q13813 2472 aaKnown RBP-1.98□□□□□ -2.73
PCNX1-208ENST00000554707 NWD1Q149M9 1564 aa-1.99□□□□□ -2.73
PCNX1-208ENST00000554707 SUPT6HQ7KZ85 1726 aaKnown RBP-2□□□□□ -2.73
PCNX1-208ENST00000554707 DMDP11532 3685 aa-2.01□□□□□ -2.73
PCNX1-208ENST00000554707 CEBPZOSA8MTT3 80 aa-2.01□□□□□ -2.73
PCNX1-208ENST00000554707 LYNX1G3V0Z9 82 aa-2.01□□□□□ -2.73
PCNX1-208ENST00000554707 IFI27P40305 119 aaPredicted RBP-2.01□□□□□ -2.73
PCNX1-208ENST00000554707 CENPEQ02224 2701 aa-2.01□□□□□ -2.73
PCNX1-208ENST00000554707 WIZO95785 1651 aa-2.02□□□□□ -2.73
PCNX1-208ENST00000554707 RGPD3A6NKT7 1758 aaPredicted RBP-2.02□□□□□ -2.73
PCNX1-208ENST00000554707 RGPD4Q7Z3J3 1758 aa-2.02□□□□□ -2.73
PCNX1-208ENST00000554707 MAGI3Q5TCQ9 1506 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms