RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 PAM16Q9Y3D7 125 aa5.77□□□□□ -1.49
LINC00517-201ENST00000553396 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
LINC00517-201ENST00000553396 C14orf144Q96I85 54 aa5.76□□□□□ -1.49
LINC00517-201ENST00000553396 TEX49A0A1B0GTD5 131 aa5.75□□□□□ -1.49
LINC00517-201ENST00000553396 SPATA45Q537H7 98 aa5.75□□□□□ -1.49
LINC00517-201ENST00000553396 MUC2Q02817 5179 aa5.75□□□□□ -1.49
LINC00517-201ENST00000553396 SLC25A20O43772 301 aa5.74□□□□□ -1.49
LINC00517-201ENST00000553396 LINC01547P58512 204 aaPredicted RBP5.74□□□□□ -1.49
LINC00517-201ENST00000553396 VAMP8Q9BV40 100 aa5.74□□□□□ -1.49
LINC00517-201ENST00000553396 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
LINC00517-201ENST00000553396 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
LINC00517-201ENST00000553396 DLEU1O43261 78 aa5.73□□□□□ -1.49
LINC00517-201ENST00000553396 VAMP3Q15836 100 aa5.73□□□□□ -1.49
LINC00517-201ENST00000553396 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
LINC00517-201ENST00000553396 SMIM29Q86T20 159 aa5.73□□□□□ -1.49
LINC00517-201ENST00000553396 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
LINC00517-201ENST00000553396 H7C2G1 150 aa5.71□□□□□ -1.5
LINC00517-201ENST00000553396 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
LINC00517-201ENST00000553396 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
LINC00517-201ENST00000553396 PRO1933Q9H354 126 aa5.71□□□□□ -1.5
LINC00517-201ENST00000553396 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
LINC00517-201ENST00000553396 C2orf91Q6ZV80 131 aa5.7□□□□□ -1.5
LINC00517-201ENST00000553396 LIMD2Q9BT23 127 aa5.7□□□□□ -1.5
LINC00517-201ENST00000553396 HIGD1BQ9P298 99 aa5.7□□□□□ -1.5
LINC00517-201ENST00000553396 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
LINC00517-201ENST00000553396 hADV29S1A0JD25 119 aa5.69□□□□□ -1.5
LINC00517-201ENST00000553396 Q6ZQY7 126 aa5.69□□□□□ -1.5
LINC00517-201ENST00000553396 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
LINC00517-201ENST00000553396 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
LINC00517-201ENST00000553396 CFC1P0CG37 223 aa5.68□□□□□ -1.5
LINC00517-201ENST00000553396 F8WEM9 126 aa5.67□□□□□ -1.5
LINC00517-201ENST00000553396 CD164Q04900 197 aa5.67□□□□□ -1.5
LINC00517-201ENST00000553396 PYY3Q5JQD4 70 aa5.67□□□□□ -1.5
LINC00517-201ENST00000553396 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
LINC00517-201ENST00000553396 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
LINC00517-201ENST00000553396 A0A0B4J2C4 111 aa5.66□□□□□ -1.5
LINC00517-201ENST00000553396 CEND1Q8N111 149 aa5.66□□□□□ -1.5
LINC00517-201ENST00000553396 A0A0U1RQV1 116 aa5.65□□□□□ -1.5
LINC00517-201ENST00000553396 FXYD2P54710 66 aa5.64□□□□□ -1.51
LINC00517-201ENST00000553396 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.64□□□□□ -1.51
LINC00517-201ENST00000553396 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
LINC00517-201ENST00000553396 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
LINC00517-201ENST00000553396 ASB16-AS1Q495Z4 193 aa5.63□□□□□ -1.51
LINC00517-201ENST00000553396 FAM218AQ96MZ4 157 aa5.62□□□□□ -1.51
LINC00517-201ENST00000553396 PRO1854Q9UHT4 67 aa5.62□□□□□ -1.51
LINC00517-201ENST00000553396 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
LINC00517-201ENST00000553396 C1orf195Q5TG92 126 aa5.61□□□□□ -1.51
LINC00517-201ENST00000553396 Q5XG85 94 aa5.61□□□□□ -1.51
LINC00517-201ENST00000553396 IGFL1Q6UW32 110 aa5.61□□□□□ -1.51
LINC00517-201ENST00000553396 CLEC2BQ92478 149 aa5.61□□□□□ -1.51
LINC00517-201ENST00000553396 SNHG12Q9BXW3 62 aa5.61□□□□□ -1.51
LINC00517-201ENST00000553396 FAT4Q6V0I7 4981 aa5.61□□□□□ -1.51
LINC00517-201ENST00000553396 H0YGX0 51 aa5.6□□□□□ -1.51
LINC00517-201ENST00000553396 H3BUT2 72 aa5.6□□□□□ -1.51
LINC00517-201ENST00000553396 OCIAD2Q56VL3 154 aa5.6□□□□□ -1.51
LINC00517-201ENST00000553396 Q6JHZ5 121 aa5.6□□□□□ -1.51
LINC00517-201ENST00000553396 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
LINC00517-201ENST00000553396 K7ERJ3 54 aa5.59□□□□□ -1.51
LINC00517-201ENST00000553396 SNCGO76070 127 aa5.59□□□□□ -1.51
LINC00517-201ENST00000553396 TCL1BO95988 128 aa5.59□□□□□ -1.51
LINC00517-201ENST00000553396 HSD52Q0P140 79 aa5.59□□□□□ -1.51
LINC00517-201ENST00000553396 PPDPFLQ8WWR9 84 aa5.59□□□□□ -1.51
LINC00517-201ENST00000553396 TRIAP1O43715 76 aa5.58□□□□□ -1.52
LINC00517-201ENST00000553396 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
LINC00517-201ENST00000553396 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
LINC00517-201ENST00000553396 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
LINC00517-201ENST00000553396 PSMB2P49721 201 aa5.55□□□□□ -1.52
LINC00517-201ENST00000553396 NDUFV3P56181 108 aaKnown RBP5.55□□□□□ -1.52
LINC00517-201ENST00000553396 A0A1B0GX51 115 aa5.54□□□□□ -1.52
LINC00517-201ENST00000553396 FABP2P12104 132 aa5.54□□□□□ -1.52
LINC00517-201ENST00000553396 PCOTHQ58A44 107 aa5.54□□□□□ -1.52
LINC00517-201ENST00000553396 H3BMG7 143 aa5.52□□□□□ -1.53
LINC00517-201ENST00000553396 DNAL4O96015 105 aa5.52□□□□□ -1.53
LINC00517-201ENST00000553396 A0A1B0GV72 72 aa5.51□□□□□ -1.53
LINC00517-201ENST00000553396 COX6CP09669 75 aa5.51□□□□□ -1.53
LINC00517-201ENST00000553396 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
LINC00517-201ENST00000553396 ORMDL1Q9P0S3 153 aa5.5□□□□□ -1.53
LINC00517-201ENST00000553396 A0A087WSZ3 146 aa5.49□□□□□ -1.53
LINC00517-201ENST00000553396 LST1O00453 97 aa5.49□□□□□ -1.53
LINC00517-201ENST00000553396 Q6Q795 121 aa5.49□□□□□ -1.53
LINC00517-201ENST00000553396 TEN1Q86WV5 123 aa5.49□□□□□ -1.53
LINC00517-201ENST00000553396 RPL37P61927 97 aaKnown RBP5.48□□□□□ -1.53
LINC00517-201ENST00000553396 SS18L2Q9UHA2 77 aa5.48□□□□□ -1.53
LINC00517-201ENST00000553396 SCGB1C2P0DMR2 95 aa5.47□□□□□ -1.53
LINC00517-201ENST00000553396 A0A1W2PNM2 257 aa5.46□□□□□ -1.54
LINC00517-201ENST00000553396 OBSCN-AS1Q96MR7 158 aa5.46□□□□□ -1.54
LINC00517-201ENST00000553396 TMEM256-PLSCR3K7ERE1 68 aa5.45□□□□□ -1.54
LINC00517-201ENST00000553396 ANKRD29Q8N6D5 301 aa5.45□□□□□ -1.54
LINC00517-201ENST00000553396 H3BQ85 93 aa5.44□□□□□ -1.54
LINC00517-201ENST00000553396 TRACP01848 142 aa5.44□□□□□ -1.54
LINC00517-201ENST00000553396 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
LINC00517-201ENST00000553396 M0R143 59 aa5.43□□□□□ -1.54
LINC00517-201ENST00000553396 Q96NJ1 140 aa5.43□□□□□ -1.54
LINC00517-201ENST00000553396 NAA38Q9BRA0 125 aaKnown RBP5.43□□□□□ -1.54
LINC00517-201ENST00000553396 SIGMAR1Q99720 223 aa5.42□□□□□ -1.54
LINC00517-201ENST00000553396 CCKP06307 115 aa5.41□□□□□ -1.54
LINC00517-201ENST00000553396 UBE2V1Q13404 147 aa5.41□□□□□ -1.54
LINC00517-201ENST00000553396 KRTAP19-2Q3LHN2 52 aa5.41□□□□□ -1.54
LINC00517-201ENST00000553396 TRBV7-4A0A0J9YYF1 115 aa5.4□□□□□ -1.54
LINC00517-201ENST00000553396 VPS25Q9BRG1 176 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms