RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 hADV29S1A0JD25 119 aa6.16□□□□□ -1.42
PTCH1-225ENST00000551845 SNCGO76070 127 aa6.16□□□□□ -1.42
PTCH1-225ENST00000551845 MOBPQ13875 183 aa6.16□□□□□ -1.42
PTCH1-225ENST00000551845 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
PTCH1-225ENST00000551845 H0YGX0 51 aa6.15□□□□□ -1.42
PTCH1-225ENST00000551845 FXYD2P54710 66 aa6.15□□□□□ -1.42
PTCH1-225ENST00000551845 Q1RN00 199 aa6.15□□□□□ -1.42
PTCH1-225ENST00000551845 SPINK1P00995 79 aa6.14□□□□□ -1.43
PTCH1-225ENST00000551845 SMIM6P0DI80 62 aa6.14□□□□□ -1.43
PTCH1-225ENST00000551845 PRR4Q16378 134 aa6.14□□□□□ -1.43
PTCH1-225ENST00000551845 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
PTCH1-225ENST00000551845 PRO1933Q9H354 126 aa6.13□□□□□ -1.43
PTCH1-225ENST00000551845 LINC01547P58512 204 aaPredicted RBP6.12□□□□□ -1.43
PTCH1-225ENST00000551845 LPAP08519 4548 aa6.11□□□□□ -1.43
PTCH1-225ENST00000551845 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
PTCH1-225ENST00000551845 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.11□□□□□ -1.43
PTCH1-225ENST00000551845 Q6ZQY7 126 aa6.11□□□□□ -1.43
PTCH1-225ENST00000551845 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
PTCH1-225ENST00000551845 Q8N377 158 aa6.11□□□□□ -1.43
PTCH1-225ENST00000551845 LOC105371267A0A1B0GV96 52 aa6.1□□□□□ -1.43
PTCH1-225ENST00000551845 COX6CP09669 75 aa6.09□□□□□ -1.43
PTCH1-225ENST00000551845 PSMB2P49721 201 aa6.09□□□□□ -1.43
PTCH1-225ENST00000551845 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
PTCH1-225ENST00000551845 A0A1B0GX51 115 aa6.08□□□□□ -1.44
PTCH1-225ENST00000551845 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
PTCH1-225ENST00000551845 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
PTCH1-225ENST00000551845 RETNLBQ9BQ08 111 aa6.08□□□□□ -1.44
PTCH1-225ENST00000551845 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
PTCH1-225ENST00000551845 F8WEM9 126 aa6.07□□□□□ -1.44
PTCH1-225ENST00000551845 TSTD3H0UI37 97 aa6.07□□□□□ -1.44
PTCH1-225ENST00000551845 K7ERJ3 54 aa6.07□□□□□ -1.44
PTCH1-225ENST00000551845 PPDPFLQ8WWR9 84 aa6.07□□□□□ -1.44
PTCH1-225ENST00000551845 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
PTCH1-225ENST00000551845 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
PTCH1-225ENST00000551845 M0R143 59 aa6.06□□□□□ -1.44
PTCH1-225ENST00000551845 TRIAP1O43715 76 aa6.06□□□□□ -1.44
PTCH1-225ENST00000551845 HRCT1Q6UXD1 115 aa6.06□□□□□ -1.44
PTCH1-225ENST00000551845 SCGB1C2P0DMR2 95 aa6.05□□□□□ -1.44
PTCH1-225ENST00000551845 CD164Q04900 197 aa6.05□□□□□ -1.44
PTCH1-225ENST00000551845 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
PTCH1-225ENST00000551845 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
PTCH1-225ENST00000551845 Q6JHZ5 121 aa6.03□□□□□ -1.44
PTCH1-225ENST00000551845 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
PTCH1-225ENST00000551845 DNAL4O96015 105 aa6.02□□□□□ -1.45
PTCH1-225ENST00000551845 CLEC2BQ92478 149 aa6.02□□□□□ -1.45
PTCH1-225ENST00000551845 H3BQ85 93 aa6.01□□□□□ -1.45
PTCH1-225ENST00000551845 FABP2P12104 132 aa6.01□□□□□ -1.45
PTCH1-225ENST00000551845 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
PTCH1-225ENST00000551845 A0A0G2JQZ4 141 aa6□□□□□ -1.45
PTCH1-225ENST00000551845 NDUFV3P56181 108 aaKnown RBP6□□□□□ -1.45
PTCH1-225ENST00000551845 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
PTCH1-225ENST00000551845 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
PTCH1-225ENST00000551845 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
PTCH1-225ENST00000551845 TMEM256-PLSCR3K7ERE1 68 aa5.98□□□□□ -1.45
PTCH1-225ENST00000551845 TPRXLQ17RH7 258 aa5.98□□□□□ -1.45
PTCH1-225ENST00000551845 Q5XG85 94 aa5.98□□□□□ -1.45
PTCH1-225ENST00000551845 IGFL1Q6UW32 110 aa5.98□□□□□ -1.45
PTCH1-225ENST00000551845 H3BMG7 143 aa5.97□□□□□ -1.45
PTCH1-225ENST00000551845 TCL1BO95988 128 aa5.97□□□□□ -1.45
PTCH1-225ENST00000551845 H3BUT2 72 aa5.96□□□□□ -1.46
PTCH1-225ENST00000551845 TRACP01848 142 aa5.96□□□□□ -1.46
PTCH1-225ENST00000551845 BATFQ16520 125 aa5.96□□□□□ -1.46
PTCH1-225ENST00000551845 MUC2Q02817 5179 aa5.96□□□□□ -1.46
PTCH1-225ENST00000551845 LST1O00453 97 aa5.95□□□□□ -1.46
PTCH1-225ENST00000551845 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
PTCH1-225ENST00000551845 TRBV7-7A0A0K0K1E9 115 aa5.94□□□□□ -1.46
PTCH1-225ENST00000551845 UBE2V1Q13404 147 aa5.93□□□□□ -1.46
PTCH1-225ENST00000551845 ATXN8Q156A1 80 aa5.93□□□□□ -1.46
PTCH1-225ENST00000551845 KRTAP13-3Q3SY46 172 aa5.93□□□□□ -1.46
PTCH1-225ENST00000551845 TEN1Q86WV5 123 aa5.93□□□□□ -1.46
PTCH1-225ENST00000551845 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
PTCH1-225ENST00000551845 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
PTCH1-225ENST00000551845 LYRM7Q5U5X0 104 aa5.92□□□□□ -1.46
PTCH1-225ENST00000551845 Q6Q795 121 aa5.92□□□□□ -1.46
PTCH1-225ENST00000551845 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
PTCH1-225ENST00000551845 NAA38Q9BRA0 125 aaKnown RBP5.92□□□□□ -1.46
PTCH1-225ENST00000551845 TRBV20-1A0A075B6N2 111 aa5.9□□□□□ -1.46
PTCH1-225ENST00000551845 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
PTCH1-225ENST00000551845 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
PTCH1-225ENST00000551845 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
PTCH1-225ENST00000551845 C9orf118A6NHY6 69 aa5.88□□□□□ -1.47
PTCH1-225ENST00000551845 RBM3P98179 157 aaKnown RBP5.88□□□□□ -1.47
PTCH1-225ENST00000551845 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
PTCH1-225ENST00000551845 A0A1B0GV72 72 aa5.87□□□□□ -1.47
PTCH1-225ENST00000551845 DSCR8Q96T75 97 aa5.87□□□□□ -1.47
PTCH1-225ENST00000551845 A0A087WSZ3 146 aa5.86□□□□□ -1.47
PTCH1-225ENST00000551845 TRBV7-4A0A0J9YYF1 115 aa5.86□□□□□ -1.47
PTCH1-225ENST00000551845 A0A1W2PNM2 257 aa5.86□□□□□ -1.47
PTCH1-225ENST00000551845 TAX1BP3O14907 124 aa5.86□□□□□ -1.47
PTCH1-225ENST00000551845 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
PTCH1-225ENST00000551845 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
PTCH1-225ENST00000551845 JMJD7-PLA2G4BH0Y9G9 81 aa5.84□□□□□ -1.47
PTCH1-225ENST00000551845 CCKP06307 115 aa5.84□□□□□ -1.47
PTCH1-225ENST00000551845 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
PTCH1-225ENST00000551845 A0A1W2PPM0 123 aa5.83□□□□□ -1.48
PTCH1-225ENST00000551845 C9JAW5 83 aa5.83□□□□□ -1.48
PTCH1-225ENST00000551845 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
PTCH1-225ENST00000551845 COL5A1-AS1Q5SY13 56 aa5.82□□□□□ -1.48
PTCH1-225ENST00000551845 VPS25Q9BRG1 176 aa5.82□□□□□ -1.48
PTCH1-225ENST00000551845 PCP4L1A6NKN8 68 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms