RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 DNAH8Q96JB1 4490 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 C11orf86A6NJI1 115 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 C9JCJ5 164 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 GNRH2O43555 120 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 PPYP01298 95 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 XCL1P47992 114 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 ZNF137PP52743 207 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 UBE2D3P61077 147 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 UBE2D2P62837 147 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 C2orf82Q6UX34 121 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 PHF5AQ7RTV0 110 aaKnown RBP1.93□□□□□ -2.1
LIMA1-205ENST00000550592 SLC50A1Q9BRV3 221 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 NPCDR1Q9BY65 106 aa1.93□□□□□ -2.1
LIMA1-205ENST00000550592 TRBV25-1A0A075B6N4 114 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 SMIM27A0A1W2PRY6 76 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 LINC01549A6NIU2 74 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 A8MUN3 132 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 LST1O00453 97 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 IGLV3-1P01715 115 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 CCKP06307 115 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
LIMA1-205ENST00000550592 RPS27P42677 84 aaKnown RBP1.92□□□□□ -2.1
LIMA1-205ENST00000550592 ZNF80P51504 273 aaPredicted RBP1.92□□□□□ -2.1
LIMA1-205ENST00000550592 DEFB131AP59861 70 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 PCOTHQ58A44 107 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 S100A7L2Q5SY68 101 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 ATP11AUNQ6ZP68 121 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 DAND5Q8N907 189 aa1.92□□□□□ -2.1
LIMA1-205ENST00000550592 NEBP20929 6669 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 SPINK4O60575 86 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 KRTAP12-1P59990 96 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 HIST1H4AP62805 103 aaKnown RBP1.91□□□□□ -2.1
LIMA1-205ENST00000550592 SUPT4H1P63272 117 aaKnown RBP1.91□□□□□ -2.1
LIMA1-205ENST00000550592 C7orf65Q6ZTY9 151 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 FP248Q71RG6 208 aaPredicted RBP1.91□□□□□ -2.1
LIMA1-205ENST00000550592 Q8N8P6 123 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 MRPL35Q9NZE8 188 aaKnown RBP1.91□□□□□ -2.1
LIMA1-205ENST00000550592 PRO1854Q9UHT4 67 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 TIMM8BQ9Y5J9 83 aaPredicted RBP1.91□□□□□ -2.1
LIMA1-205ENST00000550592 V9GYV3 84 aa1.91□□□□□ -2.1
LIMA1-205ENST00000550592 IGKV3-7A0A075B6H7 116 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 TRAV7A0A075B6U4 112 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 TRBV7-1A0A0A6YYK4 115 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 TRAV13-2A0A0B4J235 113 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 TEX49A0A1B0GTD5 131 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 H3BRN7 92 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 PRM2P04554 102 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 APELAP0DMC3 54 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 DEFB130BP0DP73 79 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 DEFB130AP0DP74 79 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 RPL27AP46776 148 aaKnown RBP1.9□□□□□ -2.11
LIMA1-205ENST00000550592 SMCR5Q8TEV8 140 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 PSENENQ9NZ42 101 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 TP73-AS1Q9UF72 201 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 USH2AO75445 5202 aa1.9□□□□□ -2.11
LIMA1-205ENST00000550592 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 TRBV7-3A0A075B6L6 115 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 A0A0G2JQZ4 141 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 IBA57-AS1B1ANH7 110 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 PLNP26678 52 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 UBE2D1P51668 147 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 RHOHQ15669 191 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 Q1T7F1 81 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 ATP5EP2Q5VTU8 51 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 Q6JHZ5 121 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 ZNF833PQ6ZTB9 187 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 C20orf197Q8N268 126 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 DIRC1Q969H9 104 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 TIMM21Q9BVV7 248 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 RHPN1-AS1Q9BWJ2 59 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 TMEM167BQ9NRX6 74 aa1.89□□□□□ -2.11
LIMA1-205ENST00000550592 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
LIMA1-205ENST00000550592 A0A0J9YY99 117 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 TRBV30A0A0K0K1B3 111 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 A0A1B0GW54 56 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 TMEM30CPA0ZSE6 113 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 ZNF815PA8K554 130 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 H3BNG1 76 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 NDUFA4O00483 81 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 IGKV1-16P04430 117 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 SAA1P0DJI8 122 aaPredicted RBP1.88□□□□□ -2.11
LIMA1-205ENST00000550592 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 SPANXN1Q5VSR9 72 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 ZNF818PQ6ZRF7 136 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 LINC00269Q8N2A0 174 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 LINC00474Q9P2X8 69 aa1.88□□□□□ -2.11
LIMA1-205ENST00000550592 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
LIMA1-205ENST00000550592 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 H7BZZ5 65 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 IGKV1-5P01602 117 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 SAA2P0DJI9 122 aaPredicted RBP1.87□□□□□ -2.11
LIMA1-205ENST00000550592 KLKP1Q107X0 134 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 TPRXLQ17RH7 258 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 SFTA2Q6UW10 78 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 SPTSSBQ8NFR3 76 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 CLEC2BQ92478 149 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 TMEM141Q96I45 108 aa1.87□□□□□ -2.11
LIMA1-205ENST00000550592 HIGD1CA8MV81 97 aa1.86□□□□□ -2.11
LIMA1-205ENST00000550592 F8WEM9 126 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms