RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 F8WEM9 126 aa14.74□□□□□ -0.05
CPSF6-205ENST00000550075 TPRXLQ17RH7 258 aa14.74□□□□□ -0.05
CPSF6-205ENST00000550075 LIMD2Q9BT23 127 aa14.74□□□□□ -0.05
CPSF6-205ENST00000550075 H0YGX0 51 aa14.73□□□□□ -0.05
CPSF6-205ENST00000550075 CD164Q04900 197 aa14.71□□□□□ -0.05
CPSF6-205ENST00000550075 PPDPFLQ8WWR9 84 aa14.7□□□□□ -0.06
CPSF6-205ENST00000550075 HRCT1Q6UXD1 115 aa14.68□□□□□ -0.06
CPSF6-205ENST00000550075 CDIP1Q9H305 208 aa14.67□□□□□ -0.06
CPSF6-205ENST00000550075 SMIM6P0DI80 62 aa14.64□□□□□ -0.07
CPSF6-205ENST00000550075 OCIAD2Q56VL3 154 aa14.64□□□□□ -0.07
CPSF6-205ENST00000550075 A0A1B0GX51 115 aa14.62□□□□□ -0.07
CPSF6-205ENST00000550075 SNHG12Q9BXW3 62 aa14.61□□□□□ -0.07
CPSF6-205ENST00000550075 K7ERJ3 54 aa14.6□□□□□ -0.07
CPSF6-205ENST00000550075 Q6JHZ5 121 aa14.6□□□□□ -0.07
CPSF6-205ENST00000550075 TRIAP1O43715 76 aa14.59□□□□□ -0.07
CPSF6-205ENST00000550075 GHRHP01286 108 aa14.59□□□□□ -0.07
CPSF6-205ENST00000550075 PSMB2P49721 201 aa14.58□□□□□ -0.08
CPSF6-205ENST00000550075 FAM218AQ96MZ4 157 aa14.58□□□□□ -0.08
CPSF6-205ENST00000550075 IGLV8-61A0A075B6I0 122 aa14.56□□□□□ -0.08
CPSF6-205ENST00000550075 COX6CP09669 75 aa14.55□□□□□ -0.08
CPSF6-205ENST00000550075 KRTAP13-3Q3SY46 172 aa14.54□□□□□ -0.08
CPSF6-205ENST00000550075 Q5XG85 94 aa14.54□□□□□ -0.08
CPSF6-205ENST00000550075 CLEC2BQ92478 149 aa14.54□□□□□ -0.08
CPSF6-205ENST00000550075 RNF213Q63HN8 5207 aa14.54□□□□□ -0.08
CPSF6-205ENST00000550075 A0A0G2JQZ4 141 aa14.53□□□□□ -0.08
CPSF6-205ENST00000550075 DNAL4O96015 105 aa14.5□□□□□ -0.09
CPSF6-205ENST00000550075 M0R143 59 aa14.49□□□□□ -0.09
CPSF6-205ENST00000550075 IGFL1Q6UW32 110 aa14.49□□□□□ -0.09
CPSF6-205ENST00000550075 TCL1BO95988 128 aa14.48□□□□□ -0.09
CPSF6-205ENST00000550075 NDUFV3P56181 108 aaKnown RBP14.45□□□□□ -0.1
CPSF6-205ENST00000550075 H3BUT2 72 aa14.44□□□□□ -0.1
CPSF6-205ENST00000550075 FABP2P12104 132 aa14.44□□□□□ -0.1
CPSF6-205ENST00000550075 TSTD3H0UI37 97 aa14.43□□□□□ -0.1
CPSF6-205ENST00000550075 H3BQ85 93 aa14.43□□□□□ -0.1
CPSF6-205ENST00000550075 TRBV7-7A0A0K0K1E9 115 aa14.41□□□□□ -0.1
CPSF6-205ENST00000550075 ORMDL1Q9P0S3 153 aa14.41□□□□□ -0.1
CPSF6-205ENST00000550075 SCGB1C2P0DMR2 95 aa14.39□□□□□ -0.11
CPSF6-205ENST00000550075 C1orf195Q5TG92 126 aa14.39□□□□□ -0.11
CPSF6-205ENST00000550075 LOC105371267A0A1B0GV96 52 aa14.38□□□□□ -0.11
CPSF6-205ENST00000550075 H3BMG7 143 aa14.37□□□□□ -0.11
CPSF6-205ENST00000550075 ASB16-AS1Q495Z4 193 aa14.34□□□□□ -0.11
CPSF6-205ENST00000550075 TMEM256-PLSCR3K7ERE1 68 aa14.33□□□□□ -0.12
CPSF6-205ENST00000550075 TRACP01848 142 aa14.33□□□□□ -0.12
CPSF6-205ENST00000550075 Q6Q795 121 aa14.32□□□□□ -0.12
CPSF6-205ENST00000550075 MUC17Q685J3 4493 aa14.31□□□□□ -0.12
CPSF6-205ENST00000550075 LST1O00453 97 aa14.31□□□□□ -0.12
CPSF6-205ENST00000550075 TEN1Q86WV5 123 aa14.31□□□□□ -0.12
CPSF6-205ENST00000550075 SS18L2Q9UHA2 77 aa14.31□□□□□ -0.12
CPSF6-205ENST00000550075 SEC61BP60468 96 aaKnown RBP14.3□□□□□ -0.12
CPSF6-205ENST00000550075 XP32Q5T750 250 aa14.3□□□□□ -0.12
CPSF6-205ENST00000550075 A0A0U1RQV1 116 aa14.27□□□□□ -0.13
CPSF6-205ENST00000550075 C9orf92A6NGG3 77 aa14.27□□□□□ -0.13
CPSF6-205ENST00000550075 UBE2V1Q13404 147 aa14.24□□□□□ -0.13
CPSF6-205ENST00000550075 BATFQ16520 125 aa14.21□□□□□ -0.13
CPSF6-205ENST00000550075 ANKRD29Q8N6D5 301 aa14.21□□□□□ -0.13
CPSF6-205ENST00000550075 A0A1B0GV72 72 aa14.2□□□□□ -0.14
CPSF6-205ENST00000550075 LYRM7Q5U5X0 104 aa14.2□□□□□ -0.14
CPSF6-205ENST00000550075 ATXN8Q156A1 80 aa14.19□□□□□ -0.14
CPSF6-205ENST00000550075 NAA38Q9BRA0 125 aaKnown RBP14.19□□□□□ -0.14
CPSF6-205ENST00000550075 MUC2Q02817 5179 aa14.19□□□□□ -0.14
CPSF6-205ENST00000550075 A0A087WSZ3 146 aa14.18□□□□□ -0.14
CPSF6-205ENST00000550075 A0A1W2PNM2 257 aa14.14□□□□□ -0.15
CPSF6-205ENST00000550075 TRBV7-4A0A0J9YYF1 115 aa14.13□□□□□ -0.15
CPSF6-205ENST00000550075 BAALC-AS2P0C853 105 aa14.13□□□□□ -0.15
CPSF6-205ENST00000550075 CCKP06307 115 aa14.09□□□□□ -0.15
CPSF6-205ENST00000550075 RBM3P98179 157 aaKnown RBP14.09□□□□□ -0.15
CPSF6-205ENST00000550075 DSCR8Q96T75 97 aa14.08□□□□□ -0.16
CPSF6-205ENST00000550075 TRBV20-1A0A075B6N2 111 aa14.06□□□□□ -0.16
CPSF6-205ENST00000550075 RPL37P61927 97 aaKnown RBP14.01□□□□□ -0.17
CPSF6-205ENST00000550075 PCOTHQ58A44 107 aa14.01□□□□□ -0.17
CPSF6-205ENST00000550075 VPS25Q9BRG1 176 aa14.01□□□□□ -0.17
CPSF6-205ENST00000550075 C9orf118A6NHY6 69 aa14□□□□□ -0.17
CPSF6-205ENST00000550075 Q96NJ1 140 aa14□□□□□ -0.17
CPSF6-205ENST00000550075 C9JAW5 83 aa13.99□□□□□ -0.17
CPSF6-205ENST00000550075 JMJD7-PLA2G4BH0Y9G9 81 aa13.99□□□□□ -0.17
CPSF6-205ENST00000550075 OBSCN-AS1Q96MR7 158 aa13.99□□□□□ -0.17
CPSF6-205ENST00000550075 SIGMAR1Q99720 223 aa13.99□□□□□ -0.17
CPSF6-205ENST00000550075 C21orf62-AS1Q17RA5 79 aa13.98□□□□□ -0.17
CPSF6-205ENST00000550075 TAX1BP3O14907 124 aa13.96□□□□□ -0.17
CPSF6-205ENST00000550075 KRTAP4-1Q9BYQ7 146 aa13.95□□□□□ -0.18
CPSF6-205ENST00000550075 A0A1W2PPM0 123 aa13.94□□□□□ -0.18
CPSF6-205ENST00000550075 IGKV4-1P06312 121 aa13.91□□□□□ -0.18
CPSF6-205ENST00000550075 PDE6GP18545 87 aa13.89□□□□□ -0.19
CPSF6-205ENST00000550075 Q75L30 129 aa13.88□□□□□ -0.19
CPSF6-205ENST00000550075 LOC110117498A0A087WWA1 95 aa13.87□□□□□ -0.19
CPSF6-205ENST00000550075 LINC00472Q9H8W2 130 aa13.87□□□□□ -0.19
CPSF6-205ENST00000550075 FAT4Q6V0I7 4981 aa13.87□□□□□ -0.19
CPSF6-205ENST00000550075 H3BT86 120 aa13.85□□□□□ -0.19
CPSF6-205ENST00000550075 Q6ZQT0 140 aa13.85□□□□□ -0.19
CPSF6-205ENST00000550075 A0A1B0GW54 56 aa13.83□□□□□ -0.2
CPSF6-205ENST00000550075 COL5A1-AS1Q5SY13 56 aa13.82□□□□□ -0.2
CPSF6-205ENST00000550075 C14orf132Q9NPU4 83 aa13.82□□□□□ -0.2
CPSF6-205ENST00000550075 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
CPSF6-205ENST00000550075 ATP11AUNQ6ZP68 121 aa13.81□□□□□ -0.2
CPSF6-205ENST00000550075 DSCR10P59022 87 aa13.8□□□□□ -0.2
CPSF6-205ENST00000550075 LINC00313P59037 77 aa13.78□□□□□ -0.2
CPSF6-205ENST00000550075 SPCS1Q9Y6A9 102 aa13.78□□□□□ -0.2
CPSF6-205ENST00000550075 J3KT08 172 aa13.77□□□□□ -0.21
CPSF6-205ENST00000550075 C20orf166-AS1Q96NR2 134 aa13.77□□□□□ -0.21
CPSF6-205ENST00000550075 A8MUU9 505 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms