RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 DEFB108AA8MXU0 73 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 LYNX1G3V0Z9 82 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 TFF3Q07654 80 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 ARHGAP5-AS1Q96IT6 56 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 CEP295Q9C0D2 2601 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 TNCP24821 2201 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 FREM2Q5SZK8 3169 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 VPS13AQ96RL7 3174 aa1.71□□□□□ -2.13
PRDM4-204ENST00000549416 WDFY3Q8IZQ1 3526 aa1.71□□□□□ -2.13
PRDM4-204ENST00000549416 MUC3AQ02505 3323 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 CEP250Q9BV73 2442 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 PIEZO2Q9H5I5 2752 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 CNOT1A5YKK6 2376 aaKnown RBP1.71□□□□□ -2.14
PRDM4-204ENST00000549416 MINOS1Q5TGZ0 78 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 ASCC3Q8N3C0 2202 aaKnown RBP1.71□□□□□ -2.14
PRDM4-204ENST00000549416 APC2O95996 2303 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 ACACAQ13085 2346 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 ACACBO00763 2458 aa1.71□□□□□ -2.14
PRDM4-204ENST00000549416 USP34Q70CQ2 3546 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 KNTC1P50748 2209 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 CACNA1CQ13936 2221 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 SPTBN2O15020 2390 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 I3L2K1 104 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 IAPPP10997 89 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 DMDP11532 3685 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 MAP1BP46821 2468 aaKnown RBP1.7□□□□□ -2.14
PRDM4-204ENST00000549416 CACNA1BQ00975 2339 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 PRB3Q04118 309 aaPredicted RBP1.7□□□□□ -2.14
PRDM4-204ENST00000549416 SPENQ96T58 3664 aaKnown RBP1.7□□□□□ -2.14
PRDM4-204ENST00000549416 KAAG1Q9UBP8 84 aa1.7□□□□□ -2.14
PRDM4-204ENST00000549416 TPRP12270 2363 aaKnown RBP1.69□□□□□ -2.14
PRDM4-204ENST00000549416 WDFY4Q6ZS81 3184 aa1.69□□□□□ -2.14
PRDM4-204ENST00000549416 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
PRDM4-204ENST00000549416 IGF2RP11717 2491 aa1.69□□□□□ -2.14
PRDM4-204ENST00000549416 CACNA1AO00555 2505 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 H3BUX3 64 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 C6orf48Q9UBA6 75 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 RP1L1Q8IWN7 2480 aaPredicted RBP1.68□□□□□ -2.14
PRDM4-204ENST00000549416 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 SPEGQ15772 3267 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 ANKRD11Q6UB99 2663 aaPredicted RBP1.68□□□□□ -2.14
PRDM4-204ENST00000549416 CFAP47Q6ZTR5 3102 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 ZNF292O60281 2723 aa1.68□□□□□ -2.14
PRDM4-204ENST00000549416 CHD8Q9HCK8 2581 aa1.67□□□□□ -2.14
PRDM4-204ENST00000549416 CELSR3Q9NYQ7 3312 aa1.67□□□□□ -2.14
PRDM4-204ENST00000549416 PRRC2CQ9Y520 2896 aaKnown RBP1.67□□□□□ -2.14
PRDM4-204ENST00000549416 FAM208BQ5VWN6 2430 aa1.67□□□□□ -2.14
PRDM4-204ENST00000549416 FRYQ5TBA9 3013 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 ABCA1O95477 2261 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 EPG5Q9HCE0 2579 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 K7EIL1 84 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 RPL39P5Q59GN2 51 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 LEAP2Q969E1 77 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 PKD1L2Q7Z442 2459 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 ANKRD17O75179 2603 aaKnown RBP1.66□□□□□ -2.14
PRDM4-204ENST00000549416 ZNF462Q96JM2 2506 aa1.66□□□□□ -2.14
PRDM4-204ENST00000549416 DMXL1Q9Y485 3027 aa1.65□□□□□ -2.14
PRDM4-204ENST00000549416 PTPRQQ9UMZ3 2332 aa1.65□□□□□ -2.15
PRDM4-204ENST00000549416 BOD1L1Q8NFC6 3051 aa1.65□□□□□ -2.15
PRDM4-204ENST00000549416 H0YAA0 97 aa1.65□□□□□ -2.15
PRDM4-204ENST00000549416 H3BUA1 57 aa1.65□□□□□ -2.15
PRDM4-204ENST00000549416 KALRNO60229 2985 aa1.65□□□□□ -2.15
PRDM4-204ENST00000549416 SPTBN4Q9H254 2564 aa1.65□□□□□ -2.15
PRDM4-204ENST00000549416 ASPMQ8IZT6 3477 aa1.64□□□□□ -2.15
PRDM4-204ENST00000549416 ANKHD1Q8IWZ3 2542 aaKnown RBP1.64□□□□□ -2.15
PRDM4-204ENST00000549416 TLN1Q9Y490 2541 aaKnown RBP1.64□□□□□ -2.15
PRDM4-204ENST00000549416 APELAP0DMC3 54 aa1.64□□□□□ -2.15
PRDM4-204ENST00000549416 PRCDQ00LT1 54 aa1.64□□□□□ -2.15
PRDM4-204ENST00000549416 CNTRLQ7Z7A1 2325 aa1.64□□□□□ -2.15
PRDM4-204ENST00000549416 MYO18BQ8IUG5 2567 aa1.63□□□□□ -2.15
PRDM4-204ENST00000549416 NAV2Q8IVL1 2488 aa1.63□□□□□ -2.15
PRDM4-204ENST00000549416 COX6A2Q02221 97 aa1.63□□□□□ -2.15
PRDM4-204ENST00000549416 SPINK9Q5DT21 86 aa1.63□□□□□ -2.15
PRDM4-204ENST00000549416 TMEM167AQ8TBQ9 72 aa1.63□□□□□ -2.15
PRDM4-204ENST00000549416 ZFHX4Q86UP3 3567 aa1.63□□□□□ -2.15
PRDM4-204ENST00000549416 PRO0255Q9UI72 69 aa1.62□□□□□ -2.15
PRDM4-204ENST00000549416 DSPP15924 2871 aaKnown RBP1.62□□□□□ -2.15
PRDM4-204ENST00000549416 DOPEY1Q5JWR5 2465 aa1.62□□□□□ -2.15
PRDM4-204ENST00000549416 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 USP24Q9UPU5 2620 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 SPTAN1Q13813 2472 aaKnown RBP1.61□□□□□ -2.15
PRDM4-204ENST00000549416 BSNQ9UPA5 3926 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 LRRK2Q5S007 2527 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 CADP27708 2225 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 LOC400499M0QZD8 3231 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 ATMQ13315 3056 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 DMXL2Q8TDJ6 3036 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 ZFYVE26Q68DK2 2539 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 NAV3Q8IVL0 2385 aa1.61□□□□□ -2.15
PRDM4-204ENST00000549416 ITPR1Q14643 2758 aa1.6□□□□□ -2.15
PRDM4-204ENST00000549416 AKAP13Q12802 2813 aa1.6□□□□□ -2.15
PRDM4-204ENST00000549416 SMR3AQ99954 134 aa1.6□□□□□ -2.15
PRDM4-204ENST00000549416 RHPN1-AS1Q9BWJ2 59 aa1.6□□□□□ -2.15
PRDM4-204ENST00000549416 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
PRDM4-204ENST00000549416 HRNRQ86YZ3 2850 aaPredicted RBP1.6□□□□□ -2.15
PRDM4-204ENST00000549416 NBEAQ8NFP9 2946 aa1.6□□□□□ -2.15
PRDM4-204ENST00000549416 NBASA2RRP1 2371 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms