RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
SSH1-203ENST00000546433 FAM229BQ4G0N7 80 aa6.52□□□□□ -1.37
SSH1-203ENST00000546433 Q1T7F1 81 aa6.51□□□□□ -1.37
SSH1-203ENST00000546433 CELSR3Q9NYQ7 3312 aa6.5□□□□□ -1.37
SSH1-203ENST00000546433 LCA10Q71F78 164 aa6.5□□□□□ -1.37
SSH1-203ENST00000546433 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
SSH1-203ENST00000546433 NOTCH1P46531 2555 aa6.49□□□□□ -1.37
SSH1-203ENST00000546433 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
SSH1-203ENST00000546433 Q8N1X5 172 aa6.48□□□□□ -1.37
SSH1-203ENST00000546433 SPRR1AP35321 89 aa6.47□□□□□ -1.37
SSH1-203ENST00000546433 CFAP46Q8IYW2 2715 aa6.47□□□□□ -1.37
SSH1-203ENST00000546433 CENPEQ02224 2701 aa6.46□□□□□ -1.37
SSH1-203ENST00000546433 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
SSH1-203ENST00000546433 TEP1Q99973 2627 aaKnown RBP6.46□□□□□ -1.38
SSH1-203ENST00000546433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
SSH1-203ENST00000546433 REV3LO60673 3130 aa6.44□□□□□ -1.38
SSH1-203ENST00000546433 TNRC18O15417 2968 aaPredicted RBP6.44□□□□□ -1.38
SSH1-203ENST00000546433 ITPR3Q14573 2671 aa6.43□□□□□ -1.38
SSH1-203ENST00000546433 SPRR1BP22528 89 aa6.43□□□□□ -1.38
SSH1-203ENST00000546433 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
SSH1-203ENST00000546433 ZNF292O60281 2723 aa6.42□□□□□ -1.38
SSH1-203ENST00000546433 Q6ZSA8 131 aa6.41□□□□□ -1.38
SSH1-203ENST00000546433 HRES1P13985 223 aa6.41□□□□□ -1.38
SSH1-203ENST00000546433 Q6ZR54 194 aa6.41□□□□□ -1.38
SSH1-203ENST00000546433 Q75L30 129 aa6.41□□□□□ -1.38
SSH1-203ENST00000546433 FRYLO94915 3013 aa6.4□□□□□ -1.38
SSH1-203ENST00000546433 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.38
SSH1-203ENST00000546433 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
SSH1-203ENST00000546433 A0A0D9SG42 100 aa6.39□□□□□ -1.39
SSH1-203ENST00000546433 SPTBN5Q9NRC6 3674 aaKnown RBP6.39□□□□□ -1.39
SSH1-203ENST00000546433 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
SSH1-203ENST00000546433 ZCCHC13Q8WW36 166 aaKnown RBP6.38□□□□□ -1.39
SSH1-203ENST00000546433 FRYQ5TBA9 3013 aa6.38□□□□□ -1.39
SSH1-203ENST00000546433 FLNAP21333 2647 aaKnown RBP6.38□□□□□ -1.39
SSH1-203ENST00000546433 WDFY4Q6ZS81 3184 aa6.37□□□□□ -1.39
SSH1-203ENST00000546433 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
SSH1-203ENST00000546433 NBEAQ8NFP9 2946 aa6.37□□□□□ -1.39
SSH1-203ENST00000546433 A0A1B0GU33 70 aa6.37□□□□□ -1.39
SSH1-203ENST00000546433 Q8NDZ9 215 aa6.37□□□□□ -1.39
SSH1-203ENST00000546433 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
SSH1-203ENST00000546433 M0R2T5 61 aa6.36□□□□□ -1.39
SSH1-203ENST00000546433 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
SSH1-203ENST00000546433 COL6A5A8TX70 2615 aa6.34□□□□□ -1.4
SSH1-203ENST00000546433 MGAQ8IWI9 3026 aa6.33□□□□□ -1.4
SSH1-203ENST00000546433 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
SSH1-203ENST00000546433 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
SSH1-203ENST00000546433 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
SSH1-203ENST00000546433 DMAC1Q96GE9 116 aa6.31□□□□□ -1.4
SSH1-203ENST00000546433 DSPP15924 2871 aaKnown RBP6.3□□□□□ -1.4
SSH1-203ENST00000546433 IGSF10Q6WRI0 2623 aa6.3□□□□□ -1.4
SSH1-203ENST00000546433 Q5W150 140 aa6.3□□□□□ -1.4
SSH1-203ENST00000546433 FREM2Q5SZK8 3169 aa6.29□□□□□ -1.4
SSH1-203ENST00000546433 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
SSH1-203ENST00000546433 S4R3F8 94 aa6.28□□□□□ -1.4
SSH1-203ENST00000546433 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
SSH1-203ENST00000546433 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
SSH1-203ENST00000546433 Q5XG85 94 aa6.27□□□□□ -1.41
SSH1-203ENST00000546433 FP248Q71RG6 208 aaPredicted RBP6.26□□□□□ -1.41
SSH1-203ENST00000546433 UNC79Q9P2D8 2635 aa6.26□□□□□ -1.41
SSH1-203ENST00000546433 COL6A3P12111 3177 aa6.25□□□□□ -1.41
SSH1-203ENST00000546433 H3BS24 57 aa6.25□□□□□ -1.41
SSH1-203ENST00000546433 KRTAP1-5Q9BYS1 174 aa6.24□□□□□ -1.41
SSH1-203ENST00000546433 WDFY3Q8IZQ1 3526 aa6.24□□□□□ -1.41
SSH1-203ENST00000546433 MAP1AP78559 2803 aaPredicted RBP6.24□□□□□ -1.41
SSH1-203ENST00000546433 GCN1Q92616 2671 aaKnown RBP6.23□□□□□ -1.41
SSH1-203ENST00000546433 SPINK7P58062 85 aa6.22□□□□□ -1.41
SSH1-203ENST00000546433 Q5VV11 94 aa6.22□□□□□ -1.41
SSH1-203ENST00000546433 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
SSH1-203ENST00000546433 NBEAL1Q6ZS30 2694 aa6.2□□□□□ -1.42
SSH1-203ENST00000546433 BOD1L1Q8NFC6 3051 aa6.2□□□□□ -1.42
SSH1-203ENST00000546433 KRTAP4-16G5E9R7 235 aaPredicted RBP6.19□□□□□ -1.42
SSH1-203ENST00000546433 AKAP13Q12802 2813 aa6.17□□□□□ -1.42
SSH1-203ENST00000546433 CHD6Q8TD26 2715 aa6.16□□□□□ -1.42
SSH1-203ENST00000546433 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
SSH1-203ENST00000546433 TEX15Q9BXT5 2789 aa6.13□□□□□ -1.43
SSH1-203ENST00000546433 R4GN34 69 aa6.13□□□□□ -1.43
SSH1-203ENST00000546433 KRTAP29-1A8MX34 341 aaPredicted RBP6.12□□□□□ -1.43
SSH1-203ENST00000546433 LOC400499M0QZD8 3231 aa6.11□□□□□ -1.43
SSH1-203ENST00000546433 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
SSH1-203ENST00000546433 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
SSH1-203ENST00000546433 MUC3AQ02505 3323 aa6.09□□□□□ -1.43
SSH1-203ENST00000546433 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
SSH1-203ENST00000546433 ASPMQ8IZT6 3477 aa6.09□□□□□ -1.44
SSH1-203ENST00000546433 ASB16-AS1Q495Z4 193 aa6.09□□□□□ -1.44
SSH1-203ENST00000546433 CFAP47Q6ZTR5 3102 aa6.08□□□□□ -1.44
SSH1-203ENST00000546433 DMXL2Q8TDJ6 3036 aa6.07□□□□□ -1.44
SSH1-203ENST00000546433 ROMO1P60602 79 aa6.07□□□□□ -1.44
SSH1-203ENST00000546433 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
SSH1-203ENST00000546433 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
SSH1-203ENST00000546433 DMDP11532 3685 aa6.06□□□□□ -1.44
SSH1-203ENST00000546433 KMT2BQ9UMN6 2715 aaPredicted RBP6.06□□□□□ -1.44
SSH1-203ENST00000546433 ADGRG4Q8IZF6 3080 aa6.06□□□□□ -1.44
SSH1-203ENST00000546433 PANO1I0J062 215 aa6.05□□□□□ -1.44
SSH1-203ENST00000546433 DCHS1Q96JQ0 3298 aa6.04□□□□□ -1.44
SSH1-203ENST00000546433 ATMQ13315 3056 aa6.04□□□□□ -1.44
SSH1-203ENST00000546433 STAB2Q8WWQ8 2551 aa6.04□□□□□ -1.44
SSH1-203ENST00000546433 KALRNO60229 2985 aa6.04□□□□□ -1.44
SSH1-203ENST00000546433 TACC2O95359 2948 aa6.03□□□□□ -1.44
SSH1-203ENST00000546433 M0QZ58 72 aa6□□□□□ -1.45
SSH1-203ENST00000546433 PLAC4Q8WY50 150 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms