RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
PDE4D-226ENST00000546160 CENPEQ02224 2701 aa3.95□□□□□ -1.78
PDE4D-226ENST00000546160 BRCA2P51587 3418 aa3.95□□□□□ -1.78
PDE4D-226ENST00000546160 CSAG1Q6PB30 78 aa3.95□□□□□ -1.78
PDE4D-226ENST00000546160 SPRR1BP22528 89 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 VPS13AQ96RL7 3174 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 A0A0D9SG42 100 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 OXTP01178 125 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 PRUNE2Q8WUY3 3088 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 CHD9Q3L8U1 2897 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 A0A1B0GU33 70 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 LCA10Q71F78 164 aa3.94□□□□□ -1.78
PDE4D-226ENST00000546160 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
PDE4D-226ENST00000546160 TRIOO75962 3097 aa3.93□□□□□ -1.78
PDE4D-226ENST00000546160 LCE6AA0A183 80 aa3.93□□□□□ -1.78
PDE4D-226ENST00000546160 FP248Q71RG6 208 aaPredicted RBP3.93□□□□□ -1.78
PDE4D-226ENST00000546160 ZNF292O60281 2723 aa3.93□□□□□ -1.78
PDE4D-226ENST00000546160 TEP1Q99973 2627 aaKnown RBP3.93□□□□□ -1.78
PDE4D-226ENST00000546160 NBEAL1Q6ZS30 2694 aa3.91□□□□□ -1.78
PDE4D-226ENST00000546160 Q5VSD8 79 aa3.91□□□□□ -1.78
PDE4D-226ENST00000546160 CELSR3Q9NYQ7 3312 aa3.91□□□□□ -1.78
PDE4D-226ENST00000546160 UNC79Q9P2D8 2635 aa3.91□□□□□ -1.78
PDE4D-226ENST00000546160 Q75L30 129 aa3.91□□□□□ -1.78
PDE4D-226ENST00000546160 WDFY4Q6ZS81 3184 aa3.9□□□□□ -1.78
PDE4D-226ENST00000546160 LAMA3Q16787 3333 aa3.9□□□□□ -1.79
PDE4D-226ENST00000546160 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
PDE4D-226ENST00000546160 A0A0C4DFX4 3053 aa3.9□□□□□ -1.79
PDE4D-226ENST00000546160 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
PDE4D-226ENST00000546160 RANBP2P49792 3224 aaKnown RBP3.89□□□□□ -1.79
PDE4D-226ENST00000546160 DNAH14Q0VDD8 3507 aa3.88□□□□□ -1.79
PDE4D-226ENST00000546160 BAHCC1Q9P281 2608 aa3.88□□□□□ -1.79
PDE4D-226ENST00000546160 UNC80Q8N2C7 3258 aa3.87□□□□□ -1.79
PDE4D-226ENST00000546160 CDH23Q9H251 3354 aa3.87□□□□□ -1.79
PDE4D-226ENST00000546160 Q5W150 140 aa3.86□□□□□ -1.79
PDE4D-226ENST00000546160 STAB1Q9NY15 2570 aa3.86□□□□□ -1.79
PDE4D-226ENST00000546160 SPINK7P58062 85 aa3.86□□□□□ -1.79
PDE4D-226ENST00000546160 KRTAP26-1Q6PEX3 210 aa3.85□□□□□ -1.79
PDE4D-226ENST00000546160 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
PDE4D-226ENST00000546160 REV3LO60673 3130 aa3.85□□□□□ -1.79
PDE4D-226ENST00000546160 USP34Q70CQ2 3546 aa3.85□□□□□ -1.79
PDE4D-226ENST00000546160 R4GN34 69 aa3.85□□□□□ -1.79
PDE4D-226ENST00000546160 RPS29P62273 56 aaKnown RBP3.85□□□□□ -1.79
PDE4D-226ENST00000546160 FRYQ5TBA9 3013 aa3.85□□□□□ -1.79
PDE4D-226ENST00000546160 LAMA1P25391 3075 aa3.84□□□□□ -1.79
PDE4D-226ENST00000546160 COL6A5A8TX70 2615 aa3.84□□□□□ -1.79
PDE4D-226ENST00000546160 GCN1Q92616 2671 aaKnown RBP3.84□□□□□ -1.79
PDE4D-226ENST00000546160 KRTAP21-3Q3LHN1 58 aa3.84□□□□□ -1.8
PDE4D-226ENST00000546160 KRTAP10-1P60331 282 aa3.83□□□□□ -1.8
PDE4D-226ENST00000546160 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
PDE4D-226ENST00000546160 SETXQ7Z333 2677 aaKnown RBP3.82□□□□□ -1.8
PDE4D-226ENST00000546160 APCP25054 2843 aa3.82□□□□□ -1.8
PDE4D-226ENST00000546160 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
PDE4D-226ENST00000546160 Q6ZR54 194 aa3.81□□□□□ -1.8
PDE4D-226ENST00000546160 DMBT1Q9UGM3 2413 aaPredicted RBP3.81□□□□□ -1.8
PDE4D-226ENST00000546160 Q8NDZ9 215 aa3.81□□□□□ -1.8
PDE4D-226ENST00000546160 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
PDE4D-226ENST00000546160 Q8N9P0 234 aaPredicted RBP3.8□□□□□ -1.8
PDE4D-226ENST00000546160 LRBAP50851 2863 aa3.8□□□□□ -1.8
PDE4D-226ENST00000546160 DSPP15924 2871 aaKnown RBP3.79□□□□□ -1.8
PDE4D-226ENST00000546160 UTP20O75691 2785 aaKnown RBP3.79□□□□□ -1.8
PDE4D-226ENST00000546160 IGSF10Q6WRI0 2623 aa3.78□□□□□ -1.8
PDE4D-226ENST00000546160 COL6A3P12111 3177 aa3.78□□□□□ -1.8
PDE4D-226ENST00000546160 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
PDE4D-226ENST00000546160 FRYLO94915 3013 aa3.78□□□□□ -1.8
PDE4D-226ENST00000546160 KRTAP4-16G5E9R7 235 aaPredicted RBP3.78□□□□□ -1.8
PDE4D-226ENST00000546160 RPL37P61927 97 aaKnown RBP3.77□□□□□ -1.81
PDE4D-226ENST00000546160 KALRNO60229 2985 aa3.77□□□□□ -1.81
PDE4D-226ENST00000546160 NSD1Q96L73 2696 aaPredicted RBP3.76□□□□□ -1.81
PDE4D-226ENST00000546160 H1FX-AS1Q4G0G2 97 aa3.75□□□□□ -1.81
PDE4D-226ENST00000546160 ROMO1P60602 79 aa3.75□□□□□ -1.81
PDE4D-226ENST00000546160 MAP1AP78559 2803 aaPredicted RBP3.75□□□□□ -1.81
PDE4D-226ENST00000546160 Q5XG85 94 aa3.74□□□□□ -1.81
PDE4D-226ENST00000546160 STAB2Q8WWQ8 2551 aa3.74□□□□□ -1.81
PDE4D-226ENST00000546160 M0QZ58 72 aa3.74□□□□□ -1.81
PDE4D-226ENST00000546160 Q5VV11 94 aa3.73□□□□□ -1.81
PDE4D-226ENST00000546160 ADM2Q7Z4H4 148 aa3.72□□□□□ -1.81
PDE4D-226ENST00000546160 A0A087X002 238 aa3.71□□□□□ -1.82
PDE4D-226ENST00000546160 SZT2Q5T011 3432 aa3.71□□□□□ -1.82
PDE4D-226ENST00000546160 SPTBN5Q9NRC6 3674 aaKnown RBP3.71□□□□□ -1.82
PDE4D-226ENST00000546160 TNRC18O15417 2968 aaPredicted RBP3.7□□□□□ -1.82
PDE4D-226ENST00000546160 VCANP13611 3396 aa3.7□□□□□ -1.82
PDE4D-226ENST00000546160 NOTCH1P46531 2555 aa3.7□□□□□ -1.82
PDE4D-226ENST00000546160 NBEAL2Q6ZNJ1 2754 aa3.7□□□□□ -1.82
PDE4D-226ENST00000546160 ASH1LQ9NR48 2969 aaKnown RBP3.7□□□□□ -1.82
PDE4D-226ENST00000546160 PANO1I0J062 215 aa3.7□□□□□ -1.82
PDE4D-226ENST00000546160 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
PDE4D-226ENST00000546160 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
PDE4D-226ENST00000546160 KRTAP29-1A8MX34 341 aaPredicted RBP3.69□□□□□ -1.82
PDE4D-226ENST00000546160 SPEGQ15772 3267 aa3.67□□□□□ -1.82
PDE4D-226ENST00000546160 CRYBG3Q68DQ2 2970 aa3.66□□□□□ -1.82
PDE4D-226ENST00000546160 DMXL2Q8TDJ6 3036 aa3.65□□□□□ -1.82
PDE4D-226ENST00000546160 BOD1L1Q8NFC6 3051 aa3.65□□□□□ -1.83
PDE4D-226ENST00000546160 A8MUU9 505 aa3.63□□□□□ -1.83
PDE4D-226ENST00000546160 FREM2Q5SZK8 3169 aa3.63□□□□□ -1.83
PDE4D-226ENST00000546160 ADGRG4Q8IZF6 3080 aa3.63□□□□□ -1.83
PDE4D-226ENST00000546160 KRTAP13-1Q8IUC0 172 aa3.62□□□□□ -1.83
PDE4D-226ENST00000546160 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
PDE4D-226ENST00000546160 ITPR1Q14643 2758 aa3.62□□□□□ -1.83
PDE4D-226ENST00000546160 UBR5O95071 2799 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms