RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 MINOS1Q5TGZ0 78 aa0.56□□□□□ -2.32
COPA-206ENST00000545266 TPRP12270 2363 aaKnown RBP0.56□□□□□ -2.32
COPA-206ENST00000545266 PKDREJQ9NTG1 2253 aa0.55□□□□□ -2.32
COPA-206ENST00000545266 APCP25054 2843 aa0.55□□□□□ -2.32
COPA-206ENST00000545266 U3KQA8 63 aa0.55□□□□□ -2.32
COPA-206ENST00000545266 DDX60Q8IY21 1712 aaKnown RBP0.53□□□□□ -2.32
COPA-206ENST00000545266 VWFP04275 2813 aa0.53□□□□□ -2.32
COPA-206ENST00000545266 KNL1Q8NG31 2342 aa0.53□□□□□ -2.33
COPA-206ENST00000545266 IQGAP2Q13576 1575 aa0.53□□□□□ -2.33
COPA-206ENST00000545266 AKAP6Q13023 2319 aa0.52□□□□□ -2.33
COPA-206ENST00000545266 CSMD3Q7Z407 3707 aa0.52□□□□□ -2.33
COPA-206ENST00000545266 SNRPGP15A8MWD9 76 aa0.52□□□□□ -2.33
COPA-206ENST00000545266 RPS27P42677 84 aaKnown RBP0.52□□□□□ -2.33
COPA-206ENST00000545266 RPS27LQ71UM5 84 aaKnown RBP0.52□□□□□ -2.33
COPA-206ENST00000545266 C6orf48Q9UBA6 75 aa0.52□□□□□ -2.33
COPA-206ENST00000545266 ANK2Q01484 3957 aa0.52□□□□□ -2.33
COPA-206ENST00000545266 NCOR1O75376 2440 aa0.51□□□□□ -2.33
COPA-206ENST00000545266 PRM1P04553 51 aa0.51□□□□□ -2.33
COPA-206ENST00000545266 PLNP26678 52 aa0.51□□□□□ -2.33
COPA-206ENST00000545266 WNK2Q9Y3S1 2297 aa0.51□□□□□ -2.33
COPA-206ENST00000545266 REV3LO60673 3130 aa0.51□□□□□ -2.33
COPA-206ENST00000545266 TNXBP22105 4242 aa0.5□□□□□ -2.33
COPA-206ENST00000545266 FAM208AQ9UK61 1670 aaKnown RBP0.5□□□□□ -2.33
COPA-206ENST00000545266 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
COPA-206ENST00000545266 M0R2T5 61 aa0.5□□□□□ -2.33
COPA-206ENST00000545266 DEFB135Q30KP9 77 aa0.5□□□□□ -2.33
COPA-206ENST00000545266 CMC2Q9NRP2 79 aa0.49□□□□□ -2.33
COPA-206ENST00000545266 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
COPA-206ENST00000545266 TMEM167BQ9NRX6 74 aa0.48□□□□□ -2.33
COPA-206ENST00000545266 CHD6Q8TD26 2715 aa0.47□□□□□ -2.33
COPA-206ENST00000545266 CSPG4Q6UVK1 2322 aa0.47□□□□□ -2.33
COPA-206ENST00000545266 DEFB106AQ8N104 65 aa0.47□□□□□ -2.33
COPA-206ENST00000545266 LINC00308Q8TCZ7 52 aa0.47□□□□□ -2.33
COPA-206ENST00000545266 OTOGQ6ZRI0 2925 aa0.47□□□□□ -2.33
COPA-206ENST00000545266 KIF21BO75037 1637 aa0.46□□□□□ -2.34
COPA-206ENST00000545266 H0YGX0 51 aa0.46□□□□□ -2.34
COPA-206ENST00000545266 S4R3F8 94 aa0.46□□□□□ -2.34
COPA-206ENST00000545266 ALMS1Q8TCU4 4167 aa0.46□□□□□ -2.34
COPA-206ENST00000545266 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
COPA-206ENST00000545266 NFAT5O94916 1531 aa0.45□□□□□ -2.34
COPA-206ENST00000545266 WT1-ASQ06250 92 aa0.45□□□□□ -2.34
COPA-206ENST00000545266 ABCA2Q9BZC7 2435 aa0.44□□□□□ -2.34
COPA-206ENST00000545266 PDE4DIPQ5VU43 2346 aa0.44□□□□□ -2.34
COPA-206ENST00000545266 IGF2RP11717 2491 aa0.43□□□□□ -2.34
COPA-206ENST00000545266 H0YGG7 62 aa0.43□□□□□ -2.34
COPA-206ENST00000545266 ZFYVE26Q68DK2 2539 aa0.43□□□□□ -2.34
COPA-206ENST00000545266 ATRQ13535 2644 aa0.42□□□□□ -2.34
COPA-206ENST00000545266 PRLHP81277 87 aa0.42□□□□□ -2.34
COPA-206ENST00000545266 TIMM8BQ9Y5J9 83 aaPredicted RBP0.42□□□□□ -2.34
COPA-206ENST00000545266 TOP2AP11388 1531 aaKnown RBP0.42□□□□□ -2.34
COPA-206ENST00000545266 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
COPA-206ENST00000545266 SMIM27A0A1W2PRY6 76 aa0.41□□□□□ -2.34
COPA-206ENST00000545266 TRANK1O15050 2925 aa0.41□□□□□ -2.34
COPA-206ENST00000545266 SPTA1P02549 2419 aa0.4□□□□□ -2.34
COPA-206ENST00000545266 ABRACLQ9P1F3 81 aa0.4□□□□□ -2.35
COPA-206ENST00000545266 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
COPA-206ENST00000545266 LINC01546A6NGU7 62 aa0.39□□□□□ -2.35
COPA-206ENST00000545266 SPRR2DP22532 72 aa0.39□□□□□ -2.35
COPA-206ENST00000545266 TFF3Q07654 80 aa0.39□□□□□ -2.35
COPA-206ENST00000545266 EP300Q09472 2414 aaPredicted RBP0.39□□□□□ -2.35
COPA-206ENST00000545266 UNC79Q9P2D8 2635 aa0.38□□□□□ -2.35
COPA-206ENST00000545266 CELSR1Q9NYQ6 3014 aa0.38□□□□□ -2.35
COPA-206ENST00000545266 BSNQ9UPA5 3926 aa0.38□□□□□ -2.35
COPA-206ENST00000545266 MUC5BQ9HC84 5762 aaPredicted RBP0.38□□□□□ -2.35
COPA-206ENST00000545266 DSPP15924 2871 aaKnown RBP0.38□□□□□ -2.35
COPA-206ENST00000545266 PCNX1Q96RV3 2341 aa0.37□□□□□ -2.35
COPA-206ENST00000545266 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
COPA-206ENST00000545266 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
COPA-206ENST00000545266 H3BUA1 57 aa0.37□□□□□ -2.35
COPA-206ENST00000545266 TOMM5Q8N4H5 51 aa0.37□□□□□ -2.35
COPA-206ENST00000545266 PRKDCP78527 4128 aaKnown RBP0.37□□□□□ -2.35
COPA-206ENST00000545266 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
COPA-206ENST00000545266 CLTCL1P53675 1640 aa0.36□□□□□ -2.35
COPA-206ENST00000545266 KAAG1Q9UBP8 84 aa0.36□□□□□ -2.35
COPA-206ENST00000545266 AKAP13Q12802 2813 aa0.36□□□□□ -2.35
COPA-206ENST00000545266 MYCBP2O75592 4640 aa0.35□□□□□ -2.35
COPA-206ENST00000545266 WFDC10BQ8IUB3 73 aa0.35□□□□□ -2.35
COPA-206ENST00000545266 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
COPA-206ENST00000545266 HUWE1Q7Z6Z7 4374 aaKnown RBP0.34□□□□□ -2.35
COPA-206ENST00000545266 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.35
COPA-206ENST00000545266 ATP7AQ04656 1500 aa0.34□□□□□ -2.35
COPA-206ENST00000545266 PTPN13Q12923 2485 aa0.33□□□□□ -2.36
COPA-206ENST00000545266 UBR5O95071 2799 aaPredicted RBP0.33□□□□□ -2.36
COPA-206ENST00000545266 MAST4O15021 2626 aa0.33□□□□□ -2.36
COPA-206ENST00000545266 HRNRQ86YZ3 2850 aaPredicted RBP0.33□□□□□ -2.36
COPA-206ENST00000545266 TNRC18O15417 2968 aaPredicted RBP0.33□□□□□ -2.36
COPA-206ENST00000545266 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
COPA-206ENST00000545266 HIVEP3Q5T1R4 2406 aa0.32□□□□□ -2.36
COPA-206ENST00000545266 CHD8Q9HCK8 2581 aa0.32□□□□□ -2.36
COPA-206ENST00000545266 FAT4Q6V0I7 4981 aa0.31□□□□□ -2.36
COPA-206ENST00000545266 IGLV5-48A0A075B6I7 105 aa0.31□□□□□ -2.36
COPA-206ENST00000545266 SPRR2BP35325 72 aa0.31□□□□□ -2.36
COPA-206ENST00000545266 SMIM2Q9BVW6 85 aa0.31□□□□□ -2.36
COPA-206ENST00000545266 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
COPA-206ENST00000545266 ACANP16112 2415 aa0.3□□□□□ -2.36
COPA-206ENST00000545266 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
COPA-206ENST00000545266 NBASA2RRP1 2371 aa0.3□□□□□ -2.36
COPA-206ENST00000545266 CEP290O15078 2479 aa0.29□□□□□ -2.36
COPA-206ENST00000545266 CACNA1AO00555 2505 aa0.29□□□□□ -2.36
COPA-206ENST00000545266 H3BNG1 76 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms