RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 ATMQ13315 3056 aa0.84□□□□□ -2.28
MDM2-230ENST00000543323 SMG1Q96Q15 3661 aaKnown RBP0.84□□□□□ -2.28
MDM2-230ENST00000543323 SPTY2D1-AS1A0A0U1RR47 76 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 STATHP02808 62 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 DEFB110Q30KQ9 67 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 NCBP2-AS2Q69YL0 99 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 DEFB107AQ8IZN7 70 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 UBR5O95071 2799 aaPredicted RBP0.83□□□□□ -2.28
MDM2-230ENST00000543323 USP9YO00507 2555 aaPredicted RBP0.83□□□□□ -2.28
MDM2-230ENST00000543323 USP9XQ93008 2570 aaPredicted RBP0.83□□□□□ -2.28
MDM2-230ENST00000543323 HIVEP3Q5T1R4 2406 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 CREBBPQ92793 2442 aa0.83□□□□□ -2.28
MDM2-230ENST00000543323 CCDC168Q8NDH2 2452 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 TEX15Q9BXT5 2789 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 TEP1Q99973 2627 aaKnown RBP0.82□□□□□ -2.28
MDM2-230ENST00000543323 UNC79Q9P2D8 2635 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 F8WEM9 126 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 H0Y9P7 68 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 PSENENQ9NZ42 101 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 U3KQA8 63 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 PCNX1Q96RV3 2341 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 PLCE1Q9P212 2302 aa0.82□□□□□ -2.28
MDM2-230ENST00000543323 SPG11Q96JI7 2443 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 DOPEY1Q5JWR5 2465 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 COL12A1Q99715 3063 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 LRBAP50851 2863 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 C2CD3Q4AC94 2353 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 ITPR3Q14573 2671 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 COX6B1P14854 86 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 PYY3Q5JQD4 70 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 CRYBG3Q68DQ2 2970 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 COX14Q96I36 57 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 DNAJC13O75165 2243 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 ANKHD1Q8IWZ3 2542 aaKnown RBP0.81□□□□□ -2.28
MDM2-230ENST00000543323 PKDREJQ9NTG1 2253 aa0.81□□□□□ -2.28
MDM2-230ENST00000543323 FLNAP21333 2647 aaKnown RBP0.81□□□□□ -2.28
MDM2-230ENST00000543323 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 MTORP42345 2549 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 TLN2Q9Y4G6 2542 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
MDM2-230ENST00000543323 FXYD6-FXYD2A0A087WZ82 144 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 H0YGG7 62 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 C6orf201Q7Z4U5 140 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 MAP1AP78559 2803 aaPredicted RBP0.8□□□□□ -2.28
MDM2-230ENST00000543323 SPENQ96T58 3664 aaKnown RBP0.8□□□□□ -2.28
MDM2-230ENST00000543323 TACC2O95359 2948 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 RELNP78509 3460 aa0.8□□□□□ -2.28
MDM2-230ENST00000543323 CELSR1Q9NYQ6 3014 aa0.79□□□□□ -2.28
MDM2-230ENST00000543323 A0A1B0GU69 56 aa0.79□□□□□ -2.28
MDM2-230ENST00000543323 SPINK1P00995 79 aa0.79□□□□□ -2.28
MDM2-230ENST00000543323 C9orf62Q8N4C0 152 aa0.79□□□□□ -2.28
MDM2-230ENST00000543323 HRNRQ86YZ3 2850 aaPredicted RBP0.78□□□□□ -2.28
MDM2-230ENST00000543323 CSMD1Q96PZ7 3565 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 ACANP16112 2415 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
MDM2-230ENST00000543323 ABCA2Q9BZC7 2435 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 NSD1Q96L73 2696 aaPredicted RBP0.78□□□□□ -2.28
MDM2-230ENST00000543323 TENM3Q9P273 2699 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 PDZD2O15018 2839 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 DCHS2Q6V1P9 2916 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 NBPF19A0A087WUL8 3843 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 RPL38P63173 70 aaKnown RBP0.78□□□□□ -2.28
MDM2-230ENST00000543323 GNGT1P63211 74 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 WFDC2Q14508 124 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 ALKAL2Q6UX46 152 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 RPS27LQ71UM5 84 aaKnown RBP0.78□□□□□ -2.28
MDM2-230ENST00000543323 ADGRG4Q8IZF6 3080 aa0.78□□□□□ -2.28
MDM2-230ENST00000543323 BSNQ9UPA5 3926 aa0.78□□□□□ -2.29
MDM2-230ENST00000543323 OTOGQ6ZRI0 2925 aa0.78□□□□□ -2.29
MDM2-230ENST00000543323 CSMD2Q7Z408 3487 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 HIVEP1P15822 2718 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 NF1P21359 2839 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 D6R8Y8 96 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 LEPROTL1O95214 131 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 SMIM11AP58511 58 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 MUSTN1Q8IVN3 82 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.291e-7■■■■□ 19.3
MDM2-230ENST00000543323 STAB1Q9NY15 2570 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 ATRQ13535 2644 aa0.77□□□□□ -2.29
MDM2-230ENST00000543323 NIPBLQ6KC79 2804 aaeCLIP0.77□□□□□ -2.29
MDM2-230ENST00000543323 ZANQ9Y493 2812 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 CSPG4Q6UVK1 2322 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 K7EP34 96 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 HMGN2P05204 90 aaKnown RBP0.76□□□□□ -2.29
MDM2-230ENST00000543323 MXRA5Q9NR99 2828 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 NBEAL1Q6ZS30 2694 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 COL6A5A8TX70 2615 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 WNK2Q9Y3S1 2297 aa0.76□□□□□ -2.29
MDM2-230ENST00000543323 CPSF4LA6NMK7 179 aaKnown RBP0.75□□□□□ -2.29
MDM2-230ENST00000543323 DEFB108AA8MXU0 73 aa0.75□□□□□ -2.29
MDM2-230ENST00000543323 MRPL33O75394 65 aaKnown RBP0.75□□□□□ -2.29
MDM2-230ENST00000543323 CFDP00746 253 aaPredicted RBP0.75□□□□□ -2.29
MDM2-230ENST00000543323 TFF3Q07654 80 aa0.75□□□□□ -2.29
MDM2-230ENST00000543323 LYNX1G3V0Z9 82 aa0.74□□□□□ -2.29
MDM2-230ENST00000543323 PEA15Q15121 130 aa0.74□□□□□ -2.29
MDM2-230ENST00000543323 ANK2Q01484 3957 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms