RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 IQGAP2Q13576 1575 aa0.84□□□□□ -2.27
GTF2H3-210ENST00000543005 IAPPP10997 89 aa0.84□□□□□ -2.27
GTF2H3-210ENST00000543005 PLNP26678 52 aa0.84□□□□□ -2.27
GTF2H3-210ENST00000543005 IQGAP1P46940 1657 aa0.84□□□□□ -2.28
GTF2H3-210ENST00000543005 PCLOQ9Y6V0 5065 aa0.84□□□□□ -2.28
GTF2H3-210ENST00000543005 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.28
GTF2H3-210ENST00000543005 SPINK4O60575 86 aa0.83□□□□□ -2.28
GTF2H3-210ENST00000543005 DEFB130BP0DP73 79 aa0.83□□□□□ -2.28
GTF2H3-210ENST00000543005 DEFB130AP0DP74 79 aa0.83□□□□□ -2.28
GTF2H3-210ENST00000543005 PRH1P02810 166 aa0.82□□□□□ -2.28
GTF2H3-210ENST00000543005 MINOS1Q5TGZ0 78 aa0.82□□□□□ -2.28
GTF2H3-210ENST00000543005 KNL1Q8NG31 2342 aa0.82□□□□□ -2.28
GTF2H3-210ENST00000543005 SPINK6Q6UWN8 80 aa0.81□□□□□ -2.28
GTF2H3-210ENST00000543005 SMR3AQ99954 134 aa0.81□□□□□ -2.28
GTF2H3-210ENST00000543005 FAM208AQ9UK61 1670 aaKnown RBP0.81□□□□□ -2.28
GTF2H3-210ENST00000543005 MAST4O15021 2626 aa0.8□□□□□ -2.28
GTF2H3-210ENST00000543005 PRKDCP78527 4128 aaKnown RBP0.8□□□□□ -2.28
GTF2H3-210ENST00000543005 LMO7Q8WWI1 1683 aa0.8□□□□□ -2.28
GTF2H3-210ENST00000543005 CHD8Q9HCK8 2581 aa0.8□□□□□ -2.28
GTF2H3-210ENST00000543005 FBN2P35556 2912 aa0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 SETXQ7Z333 2677 aaKnown RBP0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 H0YGX0 51 aa0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 RPS27P42677 84 aaKnown RBP0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 RPS27LQ71UM5 84 aaKnown RBP0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 C6orf48Q9UBA6 75 aa0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 APCP25054 2843 aa0.79□□□□□ -2.28
GTF2H3-210ENST00000543005 PKDREJQ9NTG1 2253 aa0.78□□□□□ -2.28
GTF2H3-210ENST00000543005 AKAP6Q13023 2319 aa0.78□□□□□ -2.28
GTF2H3-210ENST00000543005 TPRP12270 2363 aaKnown RBP0.78□□□□□ -2.28
GTF2H3-210ENST00000543005 DDX60Q8IY21 1712 aaKnown RBP0.78□□□□□ -2.28
GTF2H3-210ENST00000543005 VWFP04275 2813 aa0.78□□□□□ -2.28
GTF2H3-210ENST00000543005 SMIM27A0A1W2PRY6 76 aa0.78□□□□□ -2.28
GTF2H3-210ENST00000543005 TOMM5Q8N4H5 51 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 LINC00308Q8TCZ7 52 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 TMEM167BQ9NRX6 74 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 ABRACLQ9P1F3 81 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 MUC2Q02817 5179 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 CHD6Q8TD26 2715 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
GTF2H3-210ENST00000543005 LINC01546A6NGU7 62 aa0.76□□□□□ -2.29
GTF2H3-210ENST00000543005 CEP350Q5VT06 3117 aa0.76□□□□□ -2.29
GTF2H3-210ENST00000543005 KIAA1109Q2LD37 5005 aa0.76□□□□□ -2.29
GTF2H3-210ENST00000543005 NOTCH1P46531 2555 aa0.76□□□□□ -2.29
GTF2H3-210ENST00000543005 PTPN13Q12923 2485 aa0.76□□□□□ -2.29
GTF2H3-210ENST00000543005 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
GTF2H3-210ENST00000543005 FAT2Q9NYQ8 4349 aa0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 PCNTO95613 3336 aa0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 A0A0C4DFX4 3053 aa0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 DSPP15924 2871 aaKnown RBP0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 TNXBP22105 4242 aa0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 ATRQ13535 2644 aa0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 STAB1Q9NY15 2570 aa0.75□□□□□ -2.29
GTF2H3-210ENST00000543005 OTOGQ6ZRI0 2925 aa0.74□□□□□ -2.29
GTF2H3-210ENST00000543005 WNK2Q9Y3S1 2297 aa0.74□□□□□ -2.29
GTF2H3-210ENST00000543005 USP9XQ93008 2570 aaPredicted RBP0.74□□□□□ -2.29
GTF2H3-210ENST00000543005 NCOR2Q9Y618 2525 aa0.73□□□□□ -2.29
GTF2H3-210ENST00000543005 ABCA2Q9BZC7 2435 aa0.73□□□□□ -2.29
GTF2H3-210ENST00000543005 TIMM8BQ9Y5J9 83 aaPredicted RBP0.73□□□□□ -2.29
GTF2H3-210ENST00000543005 TNRC18O15417 2968 aaPredicted RBP0.73□□□□□ -2.29
GTF2H3-210ENST00000543005 NFAT5O94916 1531 aa0.73□□□□□ -2.29
GTF2H3-210ENST00000543005 PDE4DIPQ5VU43 2346 aa0.72□□□□□ -2.29
GTF2H3-210ENST00000543005 NCOR1O75376 2440 aa0.72□□□□□ -2.29
GTF2H3-210ENST00000543005 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.29
GTF2H3-210ENST00000543005 WDFY4Q6ZS81 3184 aa0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 SETD2Q9BYW2 2564 aaPredicted RBP0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 SPINK1P00995 79 aa0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 HUWE1Q7Z6Z7 4374 aaKnown RBP0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 MYO18BQ8IUG5 2567 aa0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 SPTBN4Q9H254 2564 aa0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 IGF2RP11717 2491 aa0.71□□□□□ -2.3
GTF2H3-210ENST00000543005 WT1-ASQ06250 92 aa0.7□□□□□ -2.3
GTF2H3-210ENST00000543005 KIF21BO75037 1637 aa0.7□□□□□ -2.3
GTF2H3-210ENST00000543005 FLNBO75369 2602 aaKnown RBP0.69□□□□□ -2.3
GTF2H3-210ENST00000543005 CSPG4Q6UVK1 2322 aa0.69□□□□□ -2.3
GTF2H3-210ENST00000543005 RYR1P21817 5038 aa0.69□□□□□ -2.3
GTF2H3-210ENST00000543005 TFF3Q07654 80 aa0.69□□□□□ -2.3
GTF2H3-210ENST00000543005 S4R3F8 94 aa0.69□□□□□ -2.3
GTF2H3-210ENST00000543005 ZFHX4Q86UP3 3567 aa0.69□□□□□ -2.3
GTF2H3-210ENST00000543005 SPTA1P02549 2419 aa0.68□□□□□ -2.3
GTF2H3-210ENST00000543005 U3KQA8 63 aa0.68□□□□□ -2.3
GTF2H3-210ENST00000543005 AKAP13Q12802 2813 aa0.68□□□□□ -2.3
GTF2H3-210ENST00000543005 ITPR3Q14573 2671 aa0.68□□□□□ -2.3
GTF2H3-210ENST00000543005 ANKHD1Q8IWZ3 2542 aaKnown RBP0.68□□□□□ -2.3
GTF2H3-210ENST00000543005 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
GTF2H3-210ENST00000543005 NBEAL2Q6ZNJ1 2754 aa0.67□□□□□ -2.3
GTF2H3-210ENST00000543005 HECTD1Q9ULT8 2610 aa0.67□□□□□ -2.3
GTF2H3-210ENST00000543005 DEFB106AQ8N104 65 aa0.67□□□□□ -2.3
GTF2H3-210ENST00000543005 MACF1Q9UPN3 7388 aaKnown RBP0.67□□□□□ -2.3
GTF2H3-210ENST00000543005 ATP7AQ04656 1500 aa0.67□□□□□ -2.3
GTF2H3-210ENST00000543005 NAV2Q8IVL1 2488 aa0.66□□□□□ -2.3
GTF2H3-210ENST00000543005 PRM1P04553 51 aa0.66□□□□□ -2.3
GTF2H3-210ENST00000543005 CELSR3Q9NYQ7 3312 aa0.66□□□□□ -2.3
GTF2H3-210ENST00000543005 PRRC2CQ9Y520 2896 aaKnown RBP0.66□□□□□ -2.3
GTF2H3-210ENST00000543005 COL6A5A8TX70 2615 aa0.66□□□□□ -2.3
GTF2H3-210ENST00000543005 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.3
GTF2H3-210ENST00000543005 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
GTF2H3-210ENST00000543005 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
GTF2H3-210ENST00000543005 M0R2T5 61 aa0.65□□□□□ -2.31
GTF2H3-210ENST00000543005 DEFB135Q30KP9 77 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms