RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 MGAM2Q2M2H8 2515 aa6.12□□□□□ -1.43
TRERF1-205ENST00000541110 KLK9Q2XQG4 91 aa6.12□□□□□ -1.43
TRERF1-205ENST00000541110 Q5W150 140 aa6.12□□□□□ -1.43
TRERF1-205ENST00000541110 UNC80Q8N2C7 3258 aa6.12□□□□□ -1.43
TRERF1-205ENST00000541110 PRUNE2Q8WUY3 3088 aa6.12□□□□□ -1.43
TRERF1-205ENST00000541110 ROMO1P60602 79 aa6.11□□□□□ -1.43
TRERF1-205ENST00000541110 Q75L30 129 aa6.11□□□□□ -1.43
TRERF1-205ENST00000541110 CHD9Q3L8U1 2897 aa6.1□□□□□ -1.43
TRERF1-205ENST00000541110 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
TRERF1-205ENST00000541110 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
TRERF1-205ENST00000541110 TRANK1O15050 2925 aa6.09□□□□□ -1.43
TRERF1-205ENST00000541110 RPL37P61927 97 aaKnown RBP6.08□□□□□ -1.44
TRERF1-205ENST00000541110 LCE6AA0A183 80 aa6.08□□□□□ -1.44
TRERF1-205ENST00000541110 KRTAP1-1Q07627 177 aa6.07□□□□□ -1.44
TRERF1-205ENST00000541110 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
TRERF1-205ENST00000541110 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
TRERF1-205ENST00000541110 CEP295Q9C0D2 2601 aa6.06□□□□□ -1.44
TRERF1-205ENST00000541110 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
TRERF1-205ENST00000541110 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
TRERF1-205ENST00000541110 HECTD1Q9ULT8 2610 aa6.04□□□□□ -1.44
TRERF1-205ENST00000541110 TRIOO75962 3097 aa6.04□□□□□ -1.44
TRERF1-205ENST00000541110 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
TRERF1-205ENST00000541110 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
TRERF1-205ENST00000541110 XIRP2A4UGR9 3374 aa6.02□□□□□ -1.45
TRERF1-205ENST00000541110 DNAH14Q0VDD8 3507 aa6.01□□□□□ -1.45
TRERF1-205ENST00000541110 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
TRERF1-205ENST00000541110 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
TRERF1-205ENST00000541110 AKAP13Q12802 2813 aa5.99□□□□□ -1.45
TRERF1-205ENST00000541110 ITPR3Q14573 2671 aa5.99□□□□□ -1.45
TRERF1-205ENST00000541110 SZT2Q5T011 3432 aa5.98□□□□□ -1.45
TRERF1-205ENST00000541110 Q8NDZ9 215 aa5.97□□□□□ -1.45
TRERF1-205ENST00000541110 FLNAP21333 2647 aaKnown RBP5.96□□□□□ -1.45
TRERF1-205ENST00000541110 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
TRERF1-205ENST00000541110 ATRQ13535 2644 aa5.93□□□□□ -1.46
TRERF1-205ENST00000541110 MAST4O15021 2626 aa5.93□□□□□ -1.46
TRERF1-205ENST00000541110 A8MUU9 505 aa5.93□□□□□ -1.46
TRERF1-205ENST00000541110 LAMA1P25391 3075 aa5.92□□□□□ -1.46
TRERF1-205ENST00000541110 STAB1Q9NY15 2570 aa5.92□□□□□ -1.46
TRERF1-205ENST00000541110 Q6ZR54 194 aa5.92□□□□□ -1.46
TRERF1-205ENST00000541110 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
TRERF1-205ENST00000541110 SPRR1BP22528 89 aa5.9□□□□□ -1.46
TRERF1-205ENST00000541110 Q5VV11 94 aa5.9□□□□□ -1.46
TRERF1-205ENST00000541110 CFAP54Q96N23 3096 aa5.9□□□□□ -1.46
TRERF1-205ENST00000541110 FLNBO75369 2602 aaKnown RBP5.9□□□□□ -1.47
TRERF1-205ENST00000541110 KRTAP1-5Q9BYS1 174 aa5.89□□□□□ -1.47
TRERF1-205ENST00000541110 NBEAL1Q6ZS30 2694 aa5.89□□□□□ -1.47
TRERF1-205ENST00000541110 KRTAP26-1Q6PEX3 210 aa5.89□□□□□ -1.47
TRERF1-205ENST00000541110 PANO1I0J062 215 aa5.88□□□□□ -1.47
TRERF1-205ENST00000541110 HELZ2Q9BYK8 2649 aaKnown RBP5.88□□□□□ -1.47
TRERF1-205ENST00000541110 VCANP13611 3396 aa5.88□□□□□ -1.47
TRERF1-205ENST00000541110 TEX15Q9BXT5 2789 aa5.87□□□□□ -1.47
TRERF1-205ENST00000541110 VPS13AQ96RL7 3174 aa5.86□□□□□ -1.47
TRERF1-205ENST00000541110 SPRR1AP35321 89 aa5.86□□□□□ -1.47
TRERF1-205ENST00000541110 Q5XG85 94 aa5.85□□□□□ -1.47
TRERF1-205ENST00000541110 EYSQ5T1H1 3165 aa5.84□□□□□ -1.47
TRERF1-205ENST00000541110 A0A087X002 238 aa5.84□□□□□ -1.47
TRERF1-205ENST00000541110 CELSR3Q9NYQ7 3312 aa5.83□□□□□ -1.48
TRERF1-205ENST00000541110 SPTBN5Q9NRC6 3674 aaKnown RBP5.82□□□□□ -1.48
TRERF1-205ENST00000541110 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
TRERF1-205ENST00000541110 CHD6Q8TD26 2715 aa5.81□□□□□ -1.48
TRERF1-205ENST00000541110 REV3LO60673 3130 aa5.81□□□□□ -1.48
TRERF1-205ENST00000541110 CENPEQ02224 2701 aa5.81□□□□□ -1.48
TRERF1-205ENST00000541110 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
TRERF1-205ENST00000541110 SPEGQ15772 3267 aa5.8□□□□□ -1.48
TRERF1-205ENST00000541110 WDFY4Q6ZS81 3184 aa5.79□□□□□ -1.48
TRERF1-205ENST00000541110 TNP1P09430 55 aa5.79□□□□□ -1.48
TRERF1-205ENST00000541110 CYSTM1Q9H1C7 97 aa5.78□□□□□ -1.48
TRERF1-205ENST00000541110 A8MU10 97 aa5.75□□□□□ -1.49
TRERF1-205ENST00000541110 COL6A5A8TX70 2615 aa5.74□□□□□ -1.49
TRERF1-205ENST00000541110 COL6A3P12111 3177 aa5.74□□□□□ -1.49
TRERF1-205ENST00000541110 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
TRERF1-205ENST00000541110 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
TRERF1-205ENST00000541110 KMT2BQ9UMN6 2715 aaPredicted RBP5.73□□□□□ -1.49
TRERF1-205ENST00000541110 MGAQ8IWI9 3026 aa5.73□□□□□ -1.49
TRERF1-205ENST00000541110 UNC79Q9P2D8 2635 aa5.72□□□□□ -1.49
TRERF1-205ENST00000541110 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
TRERF1-205ENST00000541110 FRYLO94915 3013 aa5.69□□□□□ -1.5
TRERF1-205ENST00000541110 STAB2Q8WWQ8 2551 aa5.69□□□□□ -1.5
TRERF1-205ENST00000541110 CRYBG3Q68DQ2 2970 aa5.68□□□□□ -1.5
TRERF1-205ENST00000541110 USP34Q70CQ2 3546 aa5.68□□□□□ -1.5
TRERF1-205ENST00000541110 DSPP15924 2871 aaKnown RBP5.67□□□□□ -1.5
TRERF1-205ENST00000541110 P0C880 135 aa5.67□□□□□ -1.5
TRERF1-205ENST00000541110 FREM2Q5SZK8 3169 aa5.67□□□□□ -1.5
TRERF1-205ENST00000541110 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
TRERF1-205ENST00000541110 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
TRERF1-205ENST00000541110 NOTCH1P46531 2555 aa5.64□□□□□ -1.51
TRERF1-205ENST00000541110 ITPR2Q14571 2701 aa5.64□□□□□ -1.51
TRERF1-205ENST00000541110 ZNF292O60281 2723 aa5.63□□□□□ -1.51
TRERF1-205ENST00000541110 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
TRERF1-205ENST00000541110 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
TRERF1-205ENST00000541110 TEP1Q99973 2627 aaKnown RBP5.6□□□□□ -1.51
TRERF1-205ENST00000541110 TNRC18O15417 2968 aaPredicted RBP5.6□□□□□ -1.51
TRERF1-205ENST00000541110 BAHCC1Q9P281 2608 aa5.6□□□□□ -1.51
TRERF1-205ENST00000541110 BOD1L1Q8NFC6 3051 aa5.6□□□□□ -1.51
TRERF1-205ENST00000541110 FRYQ5TBA9 3013 aa5.6□□□□□ -1.51
TRERF1-205ENST00000541110 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
TRERF1-205ENST00000541110 SETXQ7Z333 2677 aaKnown RBP5.58□□□□□ -1.52
TRERF1-205ENST00000541110 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
TRERF1-205ENST00000541110 NBEAQ8NFP9 2946 aa5.55□□□□□ -1.52
TRERF1-205ENST00000541110 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms