RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CELSR1Q9NYQ6 3014 aa6.77□□□□□ -1.33
PBX1-212ENST00000540236 ABCA2Q9BZC7 2435 aa6.77□□□□□ -1.33
PBX1-212ENST00000540236 F8P00451 2351 aa6.76□□□□□ -1.33
PBX1-212ENST00000540236 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
PBX1-212ENST00000540236 ASH1LQ9NR48 2969 aaKnown RBP6.76□□□□□ -1.33
PBX1-212ENST00000540236 J3QKU1 62 aa6.75□□□□□ -1.33
PBX1-212ENST00000540236 AKAP13Q12802 2813 aa6.75□□□□□ -1.33
PBX1-212ENST00000540236 DCHS2Q6V1P9 2916 aa6.75□□□□□ -1.33
PBX1-212ENST00000540236 TLN2Q9Y4G6 2542 aa6.74□□□□□ -1.33
PBX1-212ENST00000540236 SETD2Q9BYW2 2564 aaPredicted RBP6.74□□□□□ -1.33
PBX1-212ENST00000540236 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
PBX1-212ENST00000540236 MAP1AP78559 2803 aaPredicted RBP6.72□□□□□ -1.33
PBX1-212ENST00000540236 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
PBX1-212ENST00000540236 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
PBX1-212ENST00000540236 ANKRD11Q6UB99 2663 aaPredicted RBP6.72□□□□□ -1.33
PBX1-212ENST00000540236 PLA2G2DQ9UNK4 145 aa6.72□□□□□ -1.33
PBX1-212ENST00000540236 Q5W150 140 aa6.7□□□□□ -1.34
PBX1-212ENST00000540236 BSNQ9UPA5 3926 aa6.7□□□□□ -1.34
PBX1-212ENST00000540236 TLX1NBP0CAT3 122 aa6.7□□□□□ -1.34
PBX1-212ENST00000540236 ROMO1P60602 79 aa6.7□□□□□ -1.34
PBX1-212ENST00000540236 IGF2RP11717 2491 aa6.68□□□□□ -1.34
PBX1-212ENST00000540236 FAM208BQ5VWN6 2430 aa6.68□□□□□ -1.34
PBX1-212ENST00000540236 FAM229AH3BQW9 127 aa6.68□□□□□ -1.34
PBX1-212ENST00000540236 SPRR1AP35321 89 aa6.66□□□□□ -1.34
PBX1-212ENST00000540236 ANKRD17O75179 2603 aaKnown RBP6.66□□□□□ -1.34
PBX1-212ENST00000540236 ITPR1Q14643 2758 aa6.66□□□□□ -1.34
PBX1-212ENST00000540236 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
PBX1-212ENST00000540236 ZNF462Q96JM2 2506 aa6.65□□□□□ -1.34
PBX1-212ENST00000540236 POLQO75417 2590 aa6.65□□□□□ -1.34
PBX1-212ENST00000540236 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
PBX1-212ENST00000540236 MYO9AB2RTY4 2548 aa6.65□□□□□ -1.34
PBX1-212ENST00000540236 NBEAL2Q6ZNJ1 2754 aa6.65□□□□□ -1.35
PBX1-212ENST00000540236 A0A1B0GU33 70 aa6.65□□□□□ -1.35
PBX1-212ENST00000540236 ZNF861PO60384 105 aa6.64□□□□□ -1.35
PBX1-212ENST00000540236 USP9XQ93008 2570 aaPredicted RBP6.64□□□□□ -1.35
PBX1-212ENST00000540236 KRTAP7-1Q8IUC3 87 aa6.64□□□□□ -1.35
PBX1-212ENST00000540236 NBPF19A0A087WUL8 3843 aa6.64□□□□□ -1.35
PBX1-212ENST00000540236 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
PBX1-212ENST00000540236 KRTAP10-11P60412 298 aa6.63□□□□□ -1.35
PBX1-212ENST00000540236 A8MUU9 505 aa6.63□□□□□ -1.35
PBX1-212ENST00000540236 IGLV5-52A0A0A0MRZ9 124 aa6.63□□□□□ -1.35
PBX1-212ENST00000540236 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
PBX1-212ENST00000540236 KRTAP11-1Q8IUC1 163 aa6.63□□□□□ -1.35
PBX1-212ENST00000540236 CRYBG3Q68DQ2 2970 aa6.62□□□□□ -1.35
PBX1-212ENST00000540236 CHD6Q8TD26 2715 aa6.6□□□□□ -1.35
PBX1-212ENST00000540236 BDP1A6H8Y1 2624 aa6.6□□□□□ -1.35
PBX1-212ENST00000540236 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
PBX1-212ENST00000540236 H3BNG1 76 aa6.59□□□□□ -1.35
PBX1-212ENST00000540236 NAV2Q8IVL1 2488 aa6.58□□□□□ -1.36
PBX1-212ENST00000540236 DMAC1Q96GE9 116 aa6.58□□□□□ -1.36
PBX1-212ENST00000540236 CCDC168Q8NDH2 2452 aa6.57□□□□□ -1.36
PBX1-212ENST00000540236 HRNRQ86YZ3 2850 aaPredicted RBP6.56□□□□□ -1.36
PBX1-212ENST00000540236 PSORS1C2Q9UIG4 136 aa6.55□□□□□ -1.36
PBX1-212ENST00000540236 PLAC8Q9NZF1 115 aa6.55□□□□□ -1.36
PBX1-212ENST00000540236 TEX15Q9BXT5 2789 aa6.54□□□□□ -1.36
PBX1-212ENST00000540236 HIVEP2P31629 2446 aa6.54□□□□□ -1.36
PBX1-212ENST00000540236 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
PBX1-212ENST00000540236 NCOR2Q9Y618 2525 aa6.53□□□□□ -1.36
PBX1-212ENST00000540236 PKD1L2Q7Z442 2459 aa6.53□□□□□ -1.36
PBX1-212ENST00000540236 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
PBX1-212ENST00000540236 LINC00304Q8N9R0 145 aa6.53□□□□□ -1.36
PBX1-212ENST00000540236 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
PBX1-212ENST00000540236 ACACBO00763 2458 aa6.53□□□□□ -1.36
PBX1-212ENST00000540236 ZFYVE26Q68DK2 2539 aa6.52□□□□□ -1.36
PBX1-212ENST00000540236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
PBX1-212ENST00000540236 CEP295Q9C0D2 2601 aa6.51□□□□□ -1.37
PBX1-212ENST00000540236 LY6G6CO95867 125 aa6.5□□□□□ -1.37
PBX1-212ENST00000540236 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
PBX1-212ENST00000540236 USP9YO00507 2555 aaPredicted RBP6.48□□□□□ -1.37
PBX1-212ENST00000540236 PANO1I0J062 215 aa6.48□□□□□ -1.37
PBX1-212ENST00000540236 MTORP42345 2549 aa6.48□□□□□ -1.37
PBX1-212ENST00000540236 LINC00483Q53H64 154 aa6.48□□□□□ -1.37
PBX1-212ENST00000540236 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
PBX1-212ENST00000540236 CHD8Q9HCK8 2581 aa6.46□□□□□ -1.38
PBX1-212ENST00000540236 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
PBX1-212ENST00000540236 NUPR2A6NF83 97 aa6.45□□□□□ -1.38
PBX1-212ENST00000540236 SPTBN4Q9H254 2564 aa6.45□□□□□ -1.38
PBX1-212ENST00000540236 EPG5Q9HCE0 2579 aa6.45□□□□□ -1.38
PBX1-212ENST00000540236 ABCA12Q86UK0 2595 aa6.44□□□□□ -1.38
PBX1-212ENST00000540236 DOPEY1Q5JWR5 2465 aa6.43□□□□□ -1.38
PBX1-212ENST00000540236 LRRK2Q5S007 2527 aa6.42□□□□□ -1.38
PBX1-212ENST00000540236 KRTAP1-5Q9BYS1 174 aa6.42□□□□□ -1.38
PBX1-212ENST00000540236 FLG2Q5D862 2391 aaPredicted RBP6.41□□□□□ -1.38
PBX1-212ENST00000540236 NBDYA0A0U1RRE5 68 aa6.41□□□□□ -1.38
PBX1-212ENST00000540236 KRTAP1-3Q8IUG1 177 aa6.4□□□□□ -1.38
PBX1-212ENST00000540236 P0C880 135 aa6.39□□□□□ -1.39
PBX1-212ENST00000540236 SPRR1BP22528 89 aa6.38□□□□□ -1.39
PBX1-212ENST00000540236 H0YAA0 97 aa6.37□□□□□ -1.39
PBX1-212ENST00000540236 WWC2-AS2Q96NR7 200 aa6.36□□□□□ -1.39
PBX1-212ENST00000540236 C20orf166-AS1Q96NR2 134 aa6.34□□□□□ -1.39
PBX1-212ENST00000540236 Q6ZSA8 131 aa6.34□□□□□ -1.4
PBX1-212ENST00000540236 FBN2P35556 2912 aa6.33□□□□□ -1.4
PBX1-212ENST00000540236 BAHCC1Q9P281 2608 aa6.33□□□□□ -1.4
PBX1-212ENST00000540236 ACANP16112 2415 aa6.33□□□□□ -1.4
PBX1-212ENST00000540236 CACNA1AO00555 2505 aa6.33□□□□□ -1.4
PBX1-212ENST00000540236 UNC79Q9P2D8 2635 aa6.31□□□□□ -1.4
PBX1-212ENST00000540236 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
PBX1-212ENST00000540236 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
PBX1-212ENST00000540236 APCP25054 2843 aa6.29□□□□□ -1.4
PBX1-212ENST00000540236 MYO18BQ8IUG5 2567 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms