RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 GAGE2AQ6NT46 116 aa4.09□□□□□ -1.75
LPCAT3-209ENST00000540060 ST20-AS1Q8NBB2 130 aa4.09□□□□□ -1.75
LPCAT3-209ENST00000540060 TYMSOSQ8TAI1 123 aa4.09□□□□□ -1.75
LPCAT3-209ENST00000540060 RAB37Q96AX2 223 aa4.09□□□□□ -1.75
LPCAT3-209ENST00000540060 SPRR1BP22528 89 aa4.08□□□□□ -1.76
LPCAT3-209ENST00000540060 H7C2G1 150 aa4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 K7ERJ3 54 aa4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 VAMP3Q15836 100 aa4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 BVES-AS1Q5T3Y7 98 aa4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 LINC00575Q6W349 94 aa4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 NHP2Q9NX24 153 aaKnown RBP4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 PRO1854Q9UHT4 67 aa4.07□□□□□ -1.76
LPCAT3-209ENST00000540060 IGLV5-48A0A075B6I7 105 aa4.06□□□□□ -1.76
LPCAT3-209ENST00000540060 LINC01547P58512 204 aaPredicted RBP4.06□□□□□ -1.76
LPCAT3-209ENST00000540060 Q1RN00 199 aa4.06□□□□□ -1.76
LPCAT3-209ENST00000540060 LINC00304Q8N9R0 145 aa4.06□□□□□ -1.76
LPCAT3-209ENST00000540060 IGLV9-49A0A0B4J1Y8 123 aa4.05□□□□□ -1.76
LPCAT3-209ENST00000540060 TSTD3H0UI37 97 aa4.05□□□□□ -1.76
LPCAT3-209ENST00000540060 SLC25A20O43772 301 aa4.05□□□□□ -1.76
LPCAT3-209ENST00000540060 MOBPQ13875 183 aa4.05□□□□□ -1.76
LPCAT3-209ENST00000540060 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 hADV29S1A0JD25 119 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 TRIAP1O43715 76 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 TSPAN13O95857 204 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 CTAG1AP78358 180 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 Q6ZQY7 126 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 Q8NBF4 154 aa4.04□□□□□ -1.76
LPCAT3-209ENST00000540060 H0YGX0 51 aa4.03□□□□□ -1.76
LPCAT3-209ENST00000540060 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
LPCAT3-209ENST00000540060 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
LPCAT3-209ENST00000540060 Q8N377 158 aa4.03□□□□□ -1.76
LPCAT3-209ENST00000540060 DEFB105AQ8NG35 78 aa4.03□□□□□ -1.76
LPCAT3-209ENST00000540060 FAM218AQ96MZ4 157 aa4.03□□□□□ -1.76
LPCAT3-209ENST00000540060 M0R143 59 aa4.02□□□□□ -1.77
LPCAT3-209ENST00000540060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.02□□□□□ -1.77
LPCAT3-209ENST00000540060 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
LPCAT3-209ENST00000540060 LAMTOR3Q9UHA4 124 aa4.02□□□□□ -1.77
LPCAT3-209ENST00000540060 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
LPCAT3-209ENST00000540060 CLEC2BQ92478 149 aa4.01□□□□□ -1.77
LPCAT3-209ENST00000540060 LRP2P98164 4655 aa4□□□□□ -1.77
LPCAT3-209ENST00000540060 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
LPCAT3-209ENST00000540060 A0A1B0GX51 115 aa4□□□□□ -1.77
LPCAT3-209ENST00000540060 SPINK1P00995 79 aa4□□□□□ -1.77
LPCAT3-209ENST00000540060 PSMB2P49721 201 aa4□□□□□ -1.77
LPCAT3-209ENST00000540060 RPS29P62273 56 aaKnown RBP4□□□□□ -1.77
LPCAT3-209ENST00000540060 PPDPFLQ8WWR9 84 aa4□□□□□ -1.77
LPCAT3-209ENST00000540060 SNCGO76070 127 aa3.99□□□□□ -1.77
LPCAT3-209ENST00000540060 OCIAD2Q56VL3 154 aa3.99□□□□□ -1.77
LPCAT3-209ENST00000540060 LPAP08519 4548 aa3.98□□□□□ -1.77
LPCAT3-209ENST00000540060 F8WEM9 126 aa3.98□□□□□ -1.77
LPCAT3-209ENST00000540060 COX6CP09669 75 aa3.98□□□□□ -1.77
LPCAT3-209ENST00000540060 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
LPCAT3-209ENST00000540060 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
LPCAT3-209ENST00000540060 LST1O00453 97 aa3.97□□□□□ -1.77
LPCAT3-209ENST00000540060 CD164Q04900 197 aa3.97□□□□□ -1.77
LPCAT3-209ENST00000540060 PRR4Q16378 134 aa3.97□□□□□ -1.77
LPCAT3-209ENST00000540060 BATFQ16520 125 aa3.97□□□□□ -1.77
LPCAT3-209ENST00000540060 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
LPCAT3-209ENST00000540060 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
LPCAT3-209ENST00000540060 DNAL4O96015 105 aa3.96□□□□□ -1.78
LPCAT3-209ENST00000540060 TRACP01848 142 aa3.96□□□□□ -1.78
LPCAT3-209ENST00000540060 NAA38Q9BRA0 125 aaKnown RBP3.96□□□□□ -1.78
LPCAT3-209ENST00000540060 SNHG12Q9BXW3 62 aa3.96□□□□□ -1.78
LPCAT3-209ENST00000540060 Q6JHZ5 121 aa3.95□□□□□ -1.78
LPCAT3-209ENST00000540060 IGFL1Q6UW32 110 aa3.95□□□□□ -1.78
LPCAT3-209ENST00000540060 HRCT1Q6UXD1 115 aa3.95□□□□□ -1.78
LPCAT3-209ENST00000540060 LIMD2Q9BT23 127 aa3.95□□□□□ -1.78
LPCAT3-209ENST00000540060 ORMDL1Q9P0S3 153 aa3.95□□□□□ -1.78
LPCAT3-209ENST00000540060 H3BUT2 72 aa3.94□□□□□ -1.78
LPCAT3-209ENST00000540060 SCGB1C2P0DMR2 95 aa3.94□□□□□ -1.78
LPCAT3-209ENST00000540060 NDUFV3P56181 108 aaKnown RBP3.94□□□□□ -1.78
LPCAT3-209ENST00000540060 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
LPCAT3-209ENST00000540060 H3BQ85 93 aa3.93□□□□□ -1.78
LPCAT3-209ENST00000540060 TAX1BP3O14907 124 aa3.93□□□□□ -1.78
LPCAT3-209ENST00000540060 TCL1BO95988 128 aa3.93□□□□□ -1.78
LPCAT3-209ENST00000540060 FABP2P12104 132 aa3.93□□□□□ -1.78
LPCAT3-209ENST00000540060 Q5XG85 94 aa3.93□□□□□ -1.78
LPCAT3-209ENST00000540060 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
LPCAT3-209ENST00000540060 TMEM256-PLSCR3K7ERE1 68 aa3.92□□□□□ -1.78
LPCAT3-209ENST00000540060 ATXN8Q156A1 80 aa3.92□□□□□ -1.78
LPCAT3-209ENST00000540060 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
LPCAT3-209ENST00000540060 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
LPCAT3-209ENST00000540060 TRBV7-7A0A0K0K1E9 115 aa3.91□□□□□ -1.78
LPCAT3-209ENST00000540060 H3BMG7 143 aa3.91□□□□□ -1.78
LPCAT3-209ENST00000540060 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
LPCAT3-209ENST00000540060 TRBV20-1A0A075B6N2 111 aa3.9□□□□□ -1.79
LPCAT3-209ENST00000540060 A0A1B0GV72 72 aa3.9□□□□□ -1.79
LPCAT3-209ENST00000540060 A0A1W2PPM0 123 aa3.9□□□□□ -1.79
LPCAT3-209ENST00000540060 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
LPCAT3-209ENST00000540060 Q6Q795 121 aa3.9□□□□□ -1.79
LPCAT3-209ENST00000540060 TEN1Q86WV5 123 aa3.89□□□□□ -1.79
LPCAT3-209ENST00000540060 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 TRBV7-4A0A0J9YYF1 115 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 A0A1W2PNM2 257 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 PCP4L1A6NKN8 68 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 BAALC-AS2P0C853 105 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 ASB16-AS1Q495Z4 193 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 COL5A1-AS1Q5SY13 56 aa3.88□□□□□ -1.79
LPCAT3-209ENST00000540060 C1orf195Q5TG92 126 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms