RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 Q6ZSA8 131 aa9.09□□□□□ -0.95
CACNB1-206ENST00000539338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
CACNB1-206ENST00000539338 STAB1Q9NY15 2570 aa9.09□□□□□ -0.95
CACNB1-206ENST00000539338 Q8N1X5 172 aa9.09□□□□□ -0.95
CACNB1-206ENST00000539338 SPINT4Q6UDR6 99 aa9.07□□□□□ -0.96
CACNB1-206ENST00000539338 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
CACNB1-206ENST00000539338 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
CACNB1-206ENST00000539338 CYSTM1Q9H1C7 97 aa9.05□□□□□ -0.96
CACNB1-206ENST00000539338 GCN1Q92616 2671 aaKnown RBP9.04□□□□□ -0.96
CACNB1-206ENST00000539338 TEX15Q9BXT5 2789 aa9.04□□□□□ -0.96
CACNB1-206ENST00000539338 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
CACNB1-206ENST00000539338 FRYQ5TBA9 3013 aa9.03□□□□□ -0.96
CACNB1-206ENST00000539338 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
CACNB1-206ENST00000539338 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
CACNB1-206ENST00000539338 SPRR1AP35321 89 aa8.98□□□□□ -0.97
CACNB1-206ENST00000539338 UNC79Q9P2D8 2635 aa8.98□□□□□ -0.97
CACNB1-206ENST00000539338 Q1T7F1 81 aa8.98□□□□□ -0.97
CACNB1-206ENST00000539338 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
CACNB1-206ENST00000539338 FREM2Q5SZK8 3169 aa8.96□□□□□ -0.98
CACNB1-206ENST00000539338 COL6A5A8TX70 2615 aa8.96□□□□□ -0.98
CACNB1-206ENST00000539338 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
CACNB1-206ENST00000539338 MMP24-AS1A0A0U1RRL7 71 aa8.94□□□□□ -0.98
CACNB1-206ENST00000539338 CD164Q04900 197 aa8.94□□□□□ -0.98
CACNB1-206ENST00000539338 A0A0D9SG42 100 aa8.94□□□□□ -0.98
CACNB1-206ENST00000539338 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
CACNB1-206ENST00000539338 NBEAL2Q6ZNJ1 2754 aa8.92□□□□□ -0.98
CACNB1-206ENST00000539338 HRES1P13985 223 aa8.92□□□□□ -0.98
CACNB1-206ENST00000539338 Q5XG85 94 aa8.9□□□□□ -0.98
CACNB1-206ENST00000539338 KRTAP26-1Q6PEX3 210 aa8.9□□□□□ -0.99
CACNB1-206ENST00000539338 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.99
CACNB1-206ENST00000539338 LCA10Q71F78 164 aa8.9□□□□□ -0.99
CACNB1-206ENST00000539338 NOTCH1P46531 2555 aa8.89□□□□□ -0.99
CACNB1-206ENST00000539338 NBEAL1Q6ZS30 2694 aa8.88□□□□□ -0.99
CACNB1-206ENST00000539338 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
CACNB1-206ENST00000539338 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
CACNB1-206ENST00000539338 VCANP13611 3396 aa8.88□□□□□ -0.99
CACNB1-206ENST00000539338 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
CACNB1-206ENST00000539338 LAMA1P25391 3075 aa8.87□□□□□ -0.99
CACNB1-206ENST00000539338 DNAH14Q0VDD8 3507 aa8.87□□□□□ -0.99
CACNB1-206ENST00000539338 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
CACNB1-206ENST00000539338 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
CACNB1-206ENST00000539338 LINC00472Q9H8W2 130 aa8.85□□□□□ -0.99
CACNB1-206ENST00000539338 IGSF10Q6WRI0 2623 aa8.84□□□□□ -0.99
CACNB1-206ENST00000539338 SPRR1BP22528 89 aa8.83□□□□□ -1
CACNB1-206ENST00000539338 Q75L30 129 aa8.82□□□□□ -1
CACNB1-206ENST00000539338 NBEAQ8NFP9 2946 aa8.81□□□□□ -1
CACNB1-206ENST00000539338 KALRNO60229 2985 aa8.81□□□□□ -1
CACNB1-206ENST00000539338 UBR5O95071 2799 aaPredicted RBP8.8□□□□□ -1
CACNB1-206ENST00000539338 KRTAP10-1P60331 282 aa8.78□□□□□ -1
CACNB1-206ENST00000539338 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
CACNB1-206ENST00000539338 Q5W150 140 aa8.76□□□□□ -1.01
CACNB1-206ENST00000539338 A0A1B0GU33 70 aa8.75□□□□□ -1.01
CACNB1-206ENST00000539338 Q6ZR54 194 aa8.75□□□□□ -1.01
CACNB1-206ENST00000539338 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
CACNB1-206ENST00000539338 Q5VV11 94 aa8.73□□□□□ -1.01
CACNB1-206ENST00000539338 ATMQ13315 3056 aa8.71□□□□□ -1.01
CACNB1-206ENST00000539338 KRTAP10-2P60368 255 aa8.71□□□□□ -1.01
CACNB1-206ENST00000539338 BOD1L1Q8NFC6 3051 aa8.7□□□□□ -1.02
CACNB1-206ENST00000539338 KRTAP4-16G5E9R7 235 aaPredicted RBP8.7□□□□□ -1.02
CACNB1-206ENST00000539338 PANO1I0J062 215 aa8.68□□□□□ -1.02
CACNB1-206ENST00000539338 SPINK7P58062 85 aa8.68□□□□□ -1.02
CACNB1-206ENST00000539338 ADGRG4Q8IZF6 3080 aa8.68□□□□□ -1.02
CACNB1-206ENST00000539338 TACC2O95359 2948 aa8.67□□□□□ -1.02
CACNB1-206ENST00000539338 ITPR1Q14643 2758 aa8.66□□□□□ -1.02
CACNB1-206ENST00000539338 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
CACNB1-206ENST00000539338 FLNCQ14315 2725 aa8.64□□□□□ -1.03
CACNB1-206ENST00000539338 FRYLO94915 3013 aa8.64□□□□□ -1.03
CACNB1-206ENST00000539338 DMXL2Q8TDJ6 3036 aa8.64□□□□□ -1.03
CACNB1-206ENST00000539338 LRBAP50851 2863 aa8.63□□□□□ -1.03
CACNB1-206ENST00000539338 COL6A3P12111 3177 aa8.63□□□□□ -1.03
CACNB1-206ENST00000539338 COL12A1Q99715 3063 aa8.62□□□□□ -1.03
CACNB1-206ENST00000539338 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
CACNB1-206ENST00000539338 NSD1Q96L73 2696 aaPredicted RBP8.58□□□□□ -1.04
CACNB1-206ENST00000539338 KRTAP29-1A8MX34 341 aaPredicted RBP8.57□□□□□ -1.04
CACNB1-206ENST00000539338 STAB2Q8WWQ8 2551 aa8.56□□□□□ -1.04
CACNB1-206ENST00000539338 SPTBN5Q9NRC6 3674 aaKnown RBP8.56□□□□□ -1.04
CACNB1-206ENST00000539338 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
CACNB1-206ENST00000539338 S4R3F8 94 aa8.55□□□□□ -1.04
CACNB1-206ENST00000539338 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
CACNB1-206ENST00000539338 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
CACNB1-206ENST00000539338 CAMK2N1Q7Z7J9 78 aa8.53□□□□□ -1.04
CACNB1-206ENST00000539338 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
CACNB1-206ENST00000539338 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
CACNB1-206ENST00000539338 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
CACNB1-206ENST00000539338 SPEGQ15772 3267 aa8.5□□□□□ -1.05
CACNB1-206ENST00000539338 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
CACNB1-206ENST00000539338 A0A087X002 238 aa8.5□□□□□ -1.05
CACNB1-206ENST00000539338 NOTCH2NLQ7Z3S9 236 aa8.5□□□□□ -1.05
CACNB1-206ENST00000539338 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
CACNB1-206ENST00000539338 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
CACNB1-206ENST00000539338 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
CACNB1-206ENST00000539338 REV3LO60673 3130 aa8.44□□□□□ -1.06
CACNB1-206ENST00000539338 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
CACNB1-206ENST00000539338 HIVEP1P15822 2718 aa8.42□□□□□ -1.06
CACNB1-206ENST00000539338 ZZEF1O43149 2961 aa8.42□□□□□ -1.06
CACNB1-206ENST00000539338 APCP25054 2843 aa8.4□□□□□ -1.06
CACNB1-206ENST00000539338 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
CACNB1-206ENST00000539338 R4GN34 69 aa8.38□□□□□ -1.07
CACNB1-206ENST00000539338 EYSQ5T1H1 3165 aa8.37□□□□□ -1.07
CACNB1-206ENST00000539338 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms