RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 KIF14Q15058 1648 aa-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 RGPD4Q7Z3J3 1758 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 C4AP0C0L4 1744 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 C4BP0C0L5 1744 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 SPRR2FQ96RM1 72 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 DSPP15924 2871 aaKnown RBP-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 SPG11Q96JI7 2443 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 DMXL1Q9Y485 3027 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 RGPD3A6NKT7 1758 aaPredicted RBP-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 NWD1Q149M9 1564 aa-0.57□□□□□ -2.5
CCDC7-209ENST00000539197 POLR1AO95602 1720 aaPredicted RBP-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 SUPT6HQ7KZ85 1726 aaKnown RBP-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 DOT1LQ8TEK3 1739 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 DNHD1Q96M86 4753 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 LCE6AA0A183 80 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 NDUFA4O00483 81 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 MT1AP04731 61 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 NREPQ16612 68 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 KRTAP20-2Q3LI61 65 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 ST20Q9HBF5 79 aa-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 FASNP49327 2511 aaKnown RBP-0.58□□□□□ -2.5
CCDC7-209ENST00000539197 A0A087WXM4 84 aa-0.59□□□□□ -2.5
CCDC7-209ENST00000539197 ADIRFQ15847 76 aa-0.59□□□□□ -2.5
CCDC7-209ENST00000539197 BIRC6Q9NR09 4857 aa-0.6□□□□□ -2.5
CCDC7-209ENST00000539197 COL6A5A8TX70 2615 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 DNAH3Q8TD57 4116 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 C9orf92A6NGG3 77 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 H3BUT2 72 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 SMIM13P0DJ93 91 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 DEFB130BP0DP73 79 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 DEFB130AP0DP74 79 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 DEFB121Q5J5C9 76 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 ATP5EP2Q5VTU8 51 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 S100A13Q99584 98 aa-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 APOBP04114 4563 aaKnown RBP-0.6□□□□□ -2.51
CCDC7-209ENST00000539197 PLXNC1O60486 1568 aa-0.61□□□□□ -2.51
CCDC7-209ENST00000539197 ZZEF1O43149 2961 aa-0.61□□□□□ -2.51
CCDC7-209ENST00000539197 VPS13BQ7Z7G8 4022 aa-0.61□□□□□ -2.51
CCDC7-209ENST00000539197 DIP2BQ9P265 1576 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 WIZO95785 1651 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 LTN1O94822 1766 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 MAGI3Q5TCQ9 1506 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 NESP48681 1621 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 MAP3K4Q9Y6R4 1608 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 LYNX1G3V0Z9 82 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 PRLHP81277 87 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 ANK3Q12955 4377 aaKnown RBP-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 SCN11AQ9UI33 1791 aa-0.62□□□□□ -2.51
CCDC7-209ENST00000539197 PIK3C2BO00750 1634 aa-0.63□□□□□ -2.51
CCDC7-209ENST00000539197 IAPPP10997 89 aa-0.63□□□□□ -2.51
CCDC7-209ENST00000539197 HMGA1P17096 107 aaKnown RBP-0.63□□□□□ -2.51
CCDC7-209ENST00000539197 BVES-AS1Q5T3Y7 98 aa-0.63□□□□□ -2.51
CCDC7-209ENST00000539197 PKHD1L1Q86WI1 4243 aa-0.63□□□□□ -2.51
CCDC7-209ENST00000539197 MUC17Q685J3 4493 aa-0.64□□□□□ -2.51
CCDC7-209ENST00000539197 MT4P47944 62 aa-0.64□□□□□ -2.51
CCDC7-209ENST00000539197 TIAM2Q8IVF5 1701 aa-0.64□□□□□ -2.51
CCDC7-209ENST00000539197 ANKRD11Q6UB99 2663 aaPredicted RBP-0.64□□□□□ -2.51
CCDC7-209ENST00000539197 ANKRD50Q9ULJ7 1429 aa-0.64□□□□□ -2.51
CCDC7-209ENST00000539197 KALRNO60229 2985 aa-0.65□□□□□ -2.51
CCDC7-209ENST00000539197 CCDC88BA6NC98 1476 aa-0.65□□□□□ -2.51
CCDC7-209ENST00000539197 MED14O60244 1454 aa-0.65□□□□□ -2.51
CCDC7-209ENST00000539197 ARFGEF2Q9Y6D5 1785 aa-0.65□□□□□ -2.51
CCDC7-209ENST00000539197 USP9YO00507 2555 aaPredicted RBP-0.66□□□□□ -2.51
CCDC7-209ENST00000539197 DEPDC5O75140 1603 aa-0.66□□□□□ -2.51
CCDC7-209ENST00000539197 S4R3F8 94 aa-0.66□□□□□ -2.52
CCDC7-209ENST00000539197 PPLO60437 1756 aa-0.66□□□□□ -2.52
CCDC7-209ENST00000539197 DNAH11Q96DT5 4516 aa-0.66□□□□□ -2.52
CCDC7-209ENST00000539197 GCN1Q92616 2671 aaKnown RBP-0.66□□□□□ -2.52
CCDC7-209ENST00000539197 USP9XQ93008 2570 aaPredicted RBP-0.66□□□□□ -2.52
CCDC7-209ENST00000539197 SMARCA2P51531 1590 aa-0.66□□□□□ -2.52
CCDC7-209ENST00000539197 LAMA2P24043 3122 aaKnown RBP-0.67□□□□□ -2.52
CCDC7-209ENST00000539197 DEFB131BA0A096LNP1 70 aa-0.67□□□□□ -2.52
CCDC7-209ENST00000539197 UTP20O75691 2785 aaKnown RBP-0.67□□□□□ -2.52
CCDC7-209ENST00000539197 ERVK-7P63135 1459 aa-0.67□□□□□ -2.52
CCDC7-209ENST00000539197 LAMA1P25391 3075 aa-0.68□□□□□ -2.52
CCDC7-209ENST00000539197 MAP3K1Q13233 1512 aa-0.68□□□□□ -2.52
CCDC7-209ENST00000539197 CRIP1P50238 77 aa-0.68□□□□□ -2.52
CCDC7-209ENST00000539197 DEFB106AQ8N104 65 aa-0.68□□□□□ -2.52
CCDC7-209ENST00000539197 ITPR3Q14573 2671 aa-0.68□□□□□ -2.52
CCDC7-209ENST00000539197 MTORP42345 2549 aa-0.68□□□□□ -2.52
CCDC7-209ENST00000539197 RIF1Q5UIP0 2472 aaKnown RBP-0.69□□□□□ -2.52
CCDC7-209ENST00000539197 C18orf32Q8TCD1 76 aa-0.69□□□□□ -2.52
CCDC7-209ENST00000539197 WDR87Q6ZQQ6 2873 aa-0.69□□□□□ -2.52
CCDC7-209ENST00000539197 NIPBLQ6KC79 2804 aaeCLIP-0.7□□□□□ -2.52
CCDC7-209ENST00000539197 CCDC18Q5T9S5 1454 aa-0.7□□□□□ -2.52
CCDC7-209ENST00000539197 COL12A1Q99715 3063 aa-0.7□□□□□ -2.52
CCDC7-209ENST00000539197 KDM5DQ9BY66 1539 aa-0.7□□□□□ -2.52
CCDC7-209ENST00000539197 DCAF1Q9Y4B6 1507 aa-0.7□□□□□ -2.52
CCDC7-209ENST00000539197 PKD1L2Q7Z442 2459 aa-0.71□□□□□ -2.52
CCDC7-209ENST00000539197 MRPL33O75394 65 aaKnown RBP-0.71□□□□□ -2.52
CCDC7-209ENST00000539197 ENHOQ6UWT2 76 aa-0.71□□□□□ -2.52
CCDC7-209ENST00000539197 KCNQ1DNQ9H478 68 aa-0.71□□□□□ -2.52
CCDC7-209ENST00000539197 ABCC1P33527 1531 aa-0.71□□□□□ -2.52
CCDC7-209ENST00000539197 RB1CC1Q8TDY2 1594 aa-0.71□□□□□ -2.52
CCDC7-209ENST00000539197 MYO18BQ8IUG5 2567 aa-0.72□□□□□ -2.52
CCDC7-209ENST00000539197 NBEAQ8NFP9 2946 aa-0.72□□□□□ -2.52
CCDC7-209ENST00000539197 DEFB110Q30KQ9 67 aa-0.72□□□□□ -2.52
CCDC7-209ENST00000539197 UBL5Q9BZL1 73 aa-0.72□□□□□ -2.52
CCDC7-209ENST00000539197 PLCH1Q4KWH8 1693 aa-0.72□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms