RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 USP9YO00507 2555 aaPredicted RBP4.12□□□□□ -1.75
SORT1-209ENST00000538502 DNAH12Q6ZR08 3092 aa4.11□□□□□ -1.75
SORT1-209ENST00000538502 ANKRD11Q6UB99 2663 aaPredicted RBP4.11□□□□□ -1.75
SORT1-209ENST00000538502 CHD9Q3L8U1 2897 aa4.1□□□□□ -1.75
SORT1-209ENST00000538502 PANO1I0J062 215 aa4.08□□□□□ -1.76
SORT1-209ENST00000538502 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
SORT1-209ENST00000538502 CHD8Q9HCK8 2581 aa4.07□□□□□ -1.76
SORT1-209ENST00000538502 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
SORT1-209ENST00000538502 MTORP42345 2549 aa4.06□□□□□ -1.76
SORT1-209ENST00000538502 M0QZ58 72 aa4.06□□□□□ -1.76
SORT1-209ENST00000538502 CEP350Q5VT06 3117 aa4.04□□□□□ -1.76
SORT1-209ENST00000538502 M0R2T5 61 aa4.04□□□□□ -1.76
SORT1-209ENST00000538502 HTTP42858 3142 aa4.04□□□□□ -1.76
SORT1-209ENST00000538502 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
SORT1-209ENST00000538502 TRANK1O15050 2925 aa4.03□□□□□ -1.76
SORT1-209ENST00000538502 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
SORT1-209ENST00000538502 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
SORT1-209ENST00000538502 SPTBN4Q9H254 2564 aa4□□□□□ -1.77
SORT1-209ENST00000538502 CHD7Q9P2D1 2997 aa4□□□□□ -1.77
SORT1-209ENST00000538502 POLQO75417 2590 aa3.98□□□□□ -1.77
SORT1-209ENST00000538502 KRTAP1-5Q9BYS1 174 aa3.98□□□□□ -1.77
SORT1-209ENST00000538502 CEP295Q9C0D2 2601 aa3.97□□□□□ -1.77
SORT1-209ENST00000538502 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SORT1-209ENST00000538502 KRTAP11-1Q8IUC1 163 aa3.94□□□□□ -1.78
SORT1-209ENST00000538502 MKI67P46013 3256 aaKnown RBP3.93□□□□□ -1.78
SORT1-209ENST00000538502 A8MU10 97 aa3.93□□□□□ -1.78
SORT1-209ENST00000538502 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
SORT1-209ENST00000538502 LAMA3Q16787 3333 aa3.93□□□□□ -1.78
SORT1-209ENST00000538502 BRCA2P51587 3418 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 A8MUU9 505 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 KRTAP10-1P60331 282 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 KRTAP13-1Q8IUC0 172 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 C5orf42Q9H799 3197 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 USP24Q9UPU5 2620 aa3.92□□□□□ -1.78
SORT1-209ENST00000538502 A0A0C4DFX4 3053 aa3.91□□□□□ -1.78
SORT1-209ENST00000538502 FASNP49327 2511 aaKnown RBP3.9□□□□□ -1.78
SORT1-209ENST00000538502 Q5VSD8 79 aa3.9□□□□□ -1.79
SORT1-209ENST00000538502 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
SORT1-209ENST00000538502 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
SORT1-209ENST00000538502 CDH23Q9H251 3354 aa3.87□□□□□ -1.79
SORT1-209ENST00000538502 KRTAP7-1Q8IUC3 87 aa3.87□□□□□ -1.79
SORT1-209ENST00000538502 TNP1P09430 55 aa3.86□□□□□ -1.79
SORT1-209ENST00000538502 XIRP2A4UGR9 3374 aa3.86□□□□□ -1.79
SORT1-209ENST00000538502 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.8
SORT1-209ENST00000538502 PRRC2CQ9Y520 2896 aaKnown RBP3.83□□□□□ -1.8
SORT1-209ENST00000538502 MGAM2Q2M2H8 2515 aa3.82□□□□□ -1.8
SORT1-209ENST00000538502 UNC80Q8N2C7 3258 aa3.82□□□□□ -1.8
SORT1-209ENST00000538502 LAMA2P24043 3122 aaKnown RBP3.81□□□□□ -1.8
SORT1-209ENST00000538502 KRTAP13-2Q52LG2 175 aa3.81□□□□□ -1.8
SORT1-209ENST00000538502 RANBP2P49792 3224 aaKnown RBP3.81□□□□□ -1.8
SORT1-209ENST00000538502 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
SORT1-209ENST00000538502 DNAH14Q0VDD8 3507 aa3.79□□□□□ -1.8
SORT1-209ENST00000538502 SZT2Q5T011 3432 aa3.79□□□□□ -1.8
SORT1-209ENST00000538502 P0C880 135 aa3.78□□□□□ -1.8
SORT1-209ENST00000538502 FLNAP21333 2647 aaKnown RBP3.77□□□□□ -1.81
SORT1-209ENST00000538502 PRUNE2Q8WUY3 3088 aa3.77□□□□□ -1.81
SORT1-209ENST00000538502 H0YAA0 97 aa3.76□□□□□ -1.81
SORT1-209ENST00000538502 ZNF292O60281 2723 aa3.76□□□□□ -1.81
SORT1-209ENST00000538502 ITPR3Q14573 2671 aa3.76□□□□□ -1.81
SORT1-209ENST00000538502 TNRC18O15417 2968 aaPredicted RBP3.75□□□□□ -1.81
SORT1-209ENST00000538502 CELSR3Q9NYQ7 3312 aa3.74□□□□□ -1.81
SORT1-209ENST00000538502 DMBT1Q9UGM3 2413 aaPredicted RBP3.73□□□□□ -1.81
SORT1-209ENST00000538502 ATRQ13535 2644 aa3.73□□□□□ -1.81
SORT1-209ENST00000538502 EPG5Q9HCE0 2579 aa3.72□□□□□ -1.81
SORT1-209ENST00000538502 HECTD1Q9ULT8 2610 aa3.71□□□□□ -1.82
SORT1-209ENST00000538502 CFAP54Q96N23 3096 aa3.7□□□□□ -1.82
SORT1-209ENST00000538502 VCANP13611 3396 aa3.7□□□□□ -1.82
SORT1-209ENST00000538502 FREM2Q5SZK8 3169 aa3.7□□□□□ -1.82
SORT1-209ENST00000538502 SPEGQ15772 3267 aa3.69□□□□□ -1.82
SORT1-209ENST00000538502 NBEAL1Q6ZS30 2694 aa3.68□□□□□ -1.82
SORT1-209ENST00000538502 NBEAQ8NFP9 2946 aa3.68□□□□□ -1.82
SORT1-209ENST00000538502 AKAP13Q12802 2813 aa3.68□□□□□ -1.82
SORT1-209ENST00000538502 TRIOO75962 3097 aa3.68□□□□□ -1.82
SORT1-209ENST00000538502 MAST4O15021 2626 aa3.66□□□□□ -1.82
SORT1-209ENST00000538502 CFAP46Q8IYW2 2715 aa3.66□□□□□ -1.82
SORT1-209ENST00000538502 FLNBO75369 2602 aaKnown RBP3.66□□□□□ -1.82
SORT1-209ENST00000538502 CENPEQ02224 2701 aa3.65□□□□□ -1.82
SORT1-209ENST00000538502 HELZ2Q9BYK8 2649 aaKnown RBP3.65□□□□□ -1.83
SORT1-209ENST00000538502 REV3LO60673 3130 aa3.65□□□□□ -1.83
SORT1-209ENST00000538502 STAB1Q9NY15 2570 aa3.65□□□□□ -1.83
SORT1-209ENST00000538502 COL6A3P12111 3177 aa3.65□□□□□ -1.83
SORT1-209ENST00000538502 CHD6Q8TD26 2715 aa3.65□□□□□ -1.83
SORT1-209ENST00000538502 MYO15AQ9UKN7 3530 aa3.64□□□□□ -1.83
SORT1-209ENST00000538502 VPS13AQ96RL7 3174 aa3.64□□□□□ -1.83
SORT1-209ENST00000538502 USP34Q70CQ2 3546 aa3.63□□□□□ -1.83
SORT1-209ENST00000538502 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
SORT1-209ENST00000538502 EYSQ5T1H1 3165 aa3.61□□□□□ -1.83
SORT1-209ENST00000538502 XP32Q5T750 250 aa3.61□□□□□ -1.83
SORT1-209ENST00000538502 DSPP15924 2871 aaKnown RBP3.6□□□□□ -1.83
SORT1-209ENST00000538502 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
SORT1-209ENST00000538502 LAMA1P25391 3075 aa3.59□□□□□ -1.83
SORT1-209ENST00000538502 SPTBN5Q9NRC6 3674 aaKnown RBP3.59□□□□□ -1.83
SORT1-209ENST00000538502 KRTAP10-8P60410 259 aa3.59□□□□□ -1.84
SORT1-209ENST00000538502 TEX15Q9BXT5 2789 aa3.58□□□□□ -1.84
SORT1-209ENST00000538502 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
SORT1-209ENST00000538502 UNC79Q9P2D8 2635 aa3.56□□□□□ -1.84
SORT1-209ENST00000538502 GCN1Q92616 2671 aaKnown RBP3.56□□□□□ -1.84
SORT1-209ENST00000538502 WDFY4Q6ZS81 3184 aa3.55□□□□□ -1.84
SORT1-209ENST00000538502 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms