RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 PREX2Q70Z35 1606 aa0.33□□□□□ -2.36
MDM1-208ENST00000538454 PRXQ9BXM0 1461 aa0.32□□□□□ -2.36
MDM1-208ENST00000538454 LYNX1G3V0Z9 82 aa0.31□□□□□ -2.36
MDM1-208ENST00000538454 MAST1Q9Y2H9 1570 aa0.31□□□□□ -2.36
MDM1-208ENST00000538454 KIF1AQ12756 1690 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 KNL1Q8NG31 2342 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 KIAA0586Q9BVV6 1533 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 LOC730098B7Z3J9 87 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 PRM1P04553 51 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
MDM1-208ENST00000538454 MROH2AA6NES4 1674 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 EEA1Q15075 1411 aa0.3□□□□□ -2.36
MDM1-208ENST00000538454 CPS1P31327 1500 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 UGGT1Q9NYU2 1555 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 BPTFQ12830 3046 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 M0R1W7 72 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 IAPPP10997 89 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 FCER1GP30273 86 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 CROCC2H7BZ55 1655 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 ITSN2Q9NZM3 1697 aa0.29□□□□□ -2.36
MDM1-208ENST00000538454 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.36
MDM1-208ENST00000538454 K7EMI3 77 aa0.28□□□□□ -2.36
MDM1-208ENST00000538454 M0R2T5 61 aa0.28□□□□□ -2.36
MDM1-208ENST00000538454 DEFB130BP0DP73 79 aa0.28□□□□□ -2.36
MDM1-208ENST00000538454 DEFB130AP0DP74 79 aa0.28□□□□□ -2.36
MDM1-208ENST00000538454 BSNQ9UPA5 3926 aa0.28□□□□□ -2.37
MDM1-208ENST00000538454 DEFB135Q30KP9 77 aa0.27□□□□□ -2.37
MDM1-208ENST00000538454 NCBP2-AS2Q69YL0 99 aa0.27□□□□□ -2.37
MDM1-208ENST00000538454 HUWE1Q7Z6Z7 4374 aaKnown RBP0.27□□□□□ -2.37
MDM1-208ENST00000538454 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
MDM1-208ENST00000538454 TNXBP22105 4242 aa0.27□□□□□ -2.37
MDM1-208ENST00000538454 REV3LO60673 3130 aa0.27□□□□□ -2.37
MDM1-208ENST00000538454 NMES1Q9C002 83 aa0.26□□□□□ -2.37
MDM1-208ENST00000538454 SYCP2Q9BX26 1530 aa0.26□□□□□ -2.37
MDM1-208ENST00000538454 TOGARAM1Q9Y4F4 1720 aa0.26□□□□□ -2.37
MDM1-208ENST00000538454 IGIPA6NJ69 53 aa0.25□□□□□ -2.37
MDM1-208ENST00000538454 SERF2P84101 59 aa0.25□□□□□ -2.37
MDM1-208ENST00000538454 MINOS1Q5TGZ0 78 aa0.25□□□□□ -2.37
MDM1-208ENST00000538454 DCHS2Q6V1P9 2916 aa0.25□□□□□ -2.37
MDM1-208ENST00000538454 CACNA1AO00555 2505 aa0.25□□□□□ -2.37
MDM1-208ENST00000538454 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
MDM1-208ENST00000538454 ANKRD36CQ5JPF3 1778 aa0.24□□□□□ -2.37
MDM1-208ENST00000538454 CDC42BPAQ5VT25 1732 aa0.24□□□□□ -2.37
MDM1-208ENST00000538454 PDE4DIPQ5VU43 2346 aa0.24□□□□□ -2.37
MDM1-208ENST00000538454 CLASP1Q7Z460 1538 aa0.23□□□□□ -2.37
MDM1-208ENST00000538454 SETXQ7Z333 2677 aaKnown RBP0.23□□□□□ -2.37
MDM1-208ENST00000538454 FAT2Q9NYQ8 4349 aa0.23□□□□□ -2.37
MDM1-208ENST00000538454 MAP1BP46821 2468 aaKnown RBP0.23□□□□□ -2.37
MDM1-208ENST00000538454 SPRR2DP22532 72 aa0.23□□□□□ -2.37
MDM1-208ENST00000538454 RPS27P42677 84 aaKnown RBP0.23□□□□□ -2.37
MDM1-208ENST00000538454 RPS27LQ71UM5 84 aaKnown RBP0.23□□□□□ -2.37
MDM1-208ENST00000538454 C6orf48Q9UBA6 75 aa0.23□□□□□ -2.37
MDM1-208ENST00000538454 FLNCQ14315 2725 aa0.22□□□□□ -2.37
MDM1-208ENST00000538454 KMT2AQ03164 3969 aa0.22□□□□□ -2.37
MDM1-208ENST00000538454 MYCBP2O75592 4640 aa0.22□□□□□ -2.37
MDM1-208ENST00000538454 ADCY10Q96PN6 1610 aa0.22□□□□□ -2.37
MDM1-208ENST00000538454 AGLP35573 1532 aa0.22□□□□□ -2.37
MDM1-208ENST00000538454 FANCD2Q9BXW9 1451 aa0.22□□□□□ -2.37
MDM1-208ENST00000538454 EP300Q09472 2414 aaPredicted RBP0.21□□□□□ -2.38
MDM1-208ENST00000538454 H0YGG7 62 aa0.21□□□□□ -2.38
MDM1-208ENST00000538454 WT1-ASQ06250 92 aa0.21□□□□□ -2.38
MDM1-208ENST00000538454 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
MDM1-208ENST00000538454 TRANK1O15050 2925 aa0.2□□□□□ -2.38
MDM1-208ENST00000538454 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
MDM1-208ENST00000538454 PRLHP81277 87 aa0.2□□□□□ -2.38
MDM1-208ENST00000538454 S4R3F8 94 aa0.2□□□□□ -2.38
MDM1-208ENST00000538454 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
MDM1-208ENST00000538454 NRXN3Q9Y4C0 1643 aa0.2□□□□□ -2.38
MDM1-208ENST00000538454 APC2O95996 2303 aa0.19□□□□□ -2.38
MDM1-208ENST00000538454 DEFB106AQ8N104 65 aa0.19□□□□□ -2.38
MDM1-208ENST00000538454 GPR98Q8WXG9 6306 aa0.19□□□□□ -2.38
MDM1-208ENST00000538454 LINC00308Q8TCZ7 52 aa0.18□□□□□ -2.38
MDM1-208ENST00000538454 TMEM167BQ9NRX6 74 aa0.18□□□□□ -2.38
MDM1-208ENST00000538454 ABCA5Q8WWZ7 1642 aa0.17□□□□□ -2.38
MDM1-208ENST00000538454 H0YGX0 51 aa0.17□□□□□ -2.38
MDM1-208ENST00000538454 SPRR2BP35325 72 aa0.17□□□□□ -2.38
MDM1-208ENST00000538454 ABCC8Q09428 1581 aa0.17□□□□□ -2.38
MDM1-208ENST00000538454 EFCAB6Q5THR3 1501 aa0.17□□□□□ -2.38
MDM1-208ENST00000538454 A0A1B0GUL6 1792 aa0.17□□□□□ -2.38
MDM1-208ENST00000538454 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
MDM1-208ENST00000538454 PLNP26678 52 aa0.16□□□□□ -2.38
MDM1-208ENST00000538454 CMC2Q9NRP2 79 aa0.16□□□□□ -2.38
MDM1-208ENST00000538454 LMO7Q8WWI1 1683 aa0.16□□□□□ -2.38
MDM1-208ENST00000538454 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
MDM1-208ENST00000538454 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
MDM1-208ENST00000538454 ACANP16112 2415 aa0.15□□□□□ -2.39
MDM1-208ENST00000538454 FLNBO75369 2602 aaKnown RBP0.15□□□□□ -2.39
MDM1-208ENST00000538454 SNRPGP15A8MWD9 76 aa0.15□□□□□ -2.39
MDM1-208ENST00000538454 LPAP08519 4548 aa0.15□□□□□ -2.39
MDM1-208ENST00000538454 H3BUA1 57 aa0.14□□□□□ -2.39
MDM1-208ENST00000538454 NBASA2RRP1 2371 aa0.14□□□□□ -2.39
MDM1-208ENST00000538454 IQGAP1P46940 1657 aa0.14□□□□□ -2.39
MDM1-208ENST00000538454 DDX60Q8IY21 1712 aaKnown RBP0.13□□□□□ -2.39
MDM1-208ENST00000538454 HMCN2Q8NDA2 5059 aa0.13□□□□□ -2.39
MDM1-208ENST00000538454 LYSTQ99698 3801 aa0.13□□□□□ -2.39
MDM1-208ENST00000538454 TIMM8BQ9Y5J9 83 aaPredicted RBP0.13□□□□□ -2.39
MDM1-208ENST00000538454 TNRC18O15417 2968 aaPredicted RBP0.13□□□□□ -2.39
MDM1-208ENST00000538454 C9orf92A6NGG3 77 aa0.12□□□□□ -2.39
MDM1-208ENST00000538454 KIF21BO75037 1637 aa0.12□□□□□ -2.39
MDM1-208ENST00000538454 AKAP13Q12802 2813 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms