RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 A0A0G2JQZ4 141 aa9.71□□□□□ -0.86
GPN3-202ENST00000537466 FXYD2P54710 66 aa9.69□□□□□ -0.86
GPN3-202ENST00000537466 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
GPN3-202ENST00000537466 MUC2Q02817 5179 aa9.67□□□□□ -0.86
GPN3-202ENST00000537466 CD164Q04900 197 aa9.66□□□□□ -0.86
GPN3-202ENST00000537466 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
GPN3-202ENST00000537466 MUC17Q685J3 4493 aa9.66□□□□□ -0.86
GPN3-202ENST00000537466 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
GPN3-202ENST00000537466 A6NJY4 79 aa9.66□□□□□ -0.86
GPN3-202ENST00000537466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
GPN3-202ENST00000537466 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.87
GPN3-202ENST00000537466 FAM218AQ96MZ4 157 aa9.64□□□□□ -0.87
GPN3-202ENST00000537466 HSD52Q0P140 79 aa9.63□□□□□ -0.87
GPN3-202ENST00000537466 F8WEM9 126 aa9.62□□□□□ -0.87
GPN3-202ENST00000537466 UQCR10Q9UDW1 63 aa9.61□□□□□ -0.87
GPN3-202ENST00000537466 H0YGX0 51 aa9.6□□□□□ -0.87
GPN3-202ENST00000537466 IGLV8-61A0A075B6I0 122 aa9.59□□□□□ -0.87
GPN3-202ENST00000537466 K7ERJ3 54 aa9.59□□□□□ -0.87
GPN3-202ENST00000537466 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
GPN3-202ENST00000537466 Q5XG85 94 aa9.58□□□□□ -0.88
GPN3-202ENST00000537466 TRIAP1O43715 76 aa9.57□□□□□ -0.88
GPN3-202ENST00000537466 OCIAD2Q56VL3 154 aa9.57□□□□□ -0.88
GPN3-202ENST00000537466 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
GPN3-202ENST00000537466 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
GPN3-202ENST00000537466 Q6JHZ5 121 aa9.55□□□□□ -0.88
GPN3-202ENST00000537466 SNCGO76070 127 aa9.54□□□□□ -0.88
GPN3-202ENST00000537466 C1orf195Q5TG92 126 aa9.54□□□□□ -0.88
GPN3-202ENST00000537466 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
GPN3-202ENST00000537466 H3BUT2 72 aa9.53□□□□□ -0.88
GPN3-202ENST00000537466 A0A1B0GX51 115 aa9.52□□□□□ -0.89
GPN3-202ENST00000537466 TSTD3H0UI37 97 aa9.52□□□□□ -0.89
GPN3-202ENST00000537466 XP32Q5T750 250 aa9.52□□□□□ -0.89
GPN3-202ENST00000537466 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
GPN3-202ENST00000537466 PSMB2P49721 201 aa9.5□□□□□ -0.89
GPN3-202ENST00000537466 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
GPN3-202ENST00000537466 C9orf92A6NGG3 77 aa9.49□□□□□ -0.89
GPN3-202ENST00000537466 TCL1BO95988 128 aa9.49□□□□□ -0.89
GPN3-202ENST00000537466 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
GPN3-202ENST00000537466 PCP4L1A6NKN8 68 aa9.47□□□□□ -0.89
GPN3-202ENST00000537466 FABP2P12104 132 aa9.46□□□□□ -0.9
GPN3-202ENST00000537466 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
GPN3-202ENST00000537466 COX6CP09669 75 aa9.44□□□□□ -0.9
GPN3-202ENST00000537466 KRTAP4-1Q9BYQ7 146 aa9.44□□□□□ -0.9
GPN3-202ENST00000537466 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
GPN3-202ENST00000537466 H3BMG7 143 aa9.42□□□□□ -0.9
GPN3-202ENST00000537466 DNAL4O96015 105 aa9.42□□□□□ -0.9
GPN3-202ENST00000537466 GHRHP01286 108 aa9.42□□□□□ -0.9
GPN3-202ENST00000537466 ORMDL1Q9P0S3 153 aa9.41□□□□□ -0.9
GPN3-202ENST00000537466 Q6Q795 121 aa9.4□□□□□ -0.91
GPN3-202ENST00000537466 FAT4Q6V0I7 4981 aa9.39□□□□□ -0.91
GPN3-202ENST00000537466 TEN1Q86WV5 123 aa9.38□□□□□ -0.91
GPN3-202ENST00000537466 A0A1B0GV72 72 aa9.36□□□□□ -0.91
GPN3-202ENST00000537466 M0R143 59 aa9.36□□□□□ -0.91
GPN3-202ENST00000537466 SCGB1C2P0DMR2 95 aa9.36□□□□□ -0.91
GPN3-202ENST00000537466 LST1O00453 97 aa9.35□□□□□ -0.91
GPN3-202ENST00000537466 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
GPN3-202ENST00000537466 H3BQ85 93 aa9.34□□□□□ -0.91
GPN3-202ENST00000537466 TMEM256-PLSCR3K7ERE1 68 aa9.34□□□□□ -0.91
GPN3-202ENST00000537466 TRACP01848 142 aa9.34□□□□□ -0.91
GPN3-202ENST00000537466 A0A087WSZ3 146 aa9.34□□□□□ -0.91
GPN3-202ENST00000537466 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
GPN3-202ENST00000537466 SS18L2Q9UHA2 77 aa9.33□□□□□ -0.92
GPN3-202ENST00000537466 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
GPN3-202ENST00000537466 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
GPN3-202ENST00000537466 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
GPN3-202ENST00000537466 LCE2AQ5TA79 106 aaPredicted RBP9.3□□□□□ -0.92
GPN3-202ENST00000537466 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
GPN3-202ENST00000537466 Q96NJ1 140 aa9.28□□□□□ -0.92
GPN3-202ENST00000537466 TRBV7-4A0A0J9YYF1 115 aa9.26□□□□□ -0.93
GPN3-202ENST00000537466 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
GPN3-202ENST00000537466 BAALC-AS2P0C853 105 aa9.24□□□□□ -0.93
GPN3-202ENST00000537466 CCKP06307 115 aa9.23□□□□□ -0.93
GPN3-202ENST00000537466 BATFQ16520 125 aa9.23□□□□□ -0.93
GPN3-202ENST00000537466 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
GPN3-202ENST00000537466 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
GPN3-202ENST00000537466 RBM3P98179 157 aaKnown RBP9.21□□□□□ -0.94
GPN3-202ENST00000537466 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
GPN3-202ENST00000537466 VPS25Q9BRG1 176 aa9.18□□□□□ -0.94
GPN3-202ENST00000537466 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
GPN3-202ENST00000537466 SIGMAR1Q99720 223 aa9.17□□□□□ -0.94
GPN3-202ENST00000537466 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
GPN3-202ENST00000537466 Q75L30 129 aa9.16□□□□□ -0.94
GPN3-202ENST00000537466 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
GPN3-202ENST00000537466 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
GPN3-202ENST00000537466 LCE2CQ5TA81 110 aa9.15□□□□□ -0.95
GPN3-202ENST00000537466 LINC00472Q9H8W2 130 aa9.15□□□□□ -0.95
GPN3-202ENST00000537466 DSCR10P59022 87 aa9.14□□□□□ -0.95
GPN3-202ENST00000537466 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
GPN3-202ENST00000537466 C9JAW5 83 aa9.13□□□□□ -0.95
GPN3-202ENST00000537466 COL5A1-AS1Q5SY13 56 aa9.13□□□□□ -0.95
GPN3-202ENST00000537466 TRBV20-1A0A075B6N2 111 aa9.11□□□□□ -0.95
GPN3-202ENST00000537466 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
GPN3-202ENST00000537466 C20orf166-AS1Q96NR2 134 aa9.11□□□□□ -0.95
GPN3-202ENST00000537466 C9orf118A6NHY6 69 aa9.1□□□□□ -0.95
GPN3-202ENST00000537466 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
GPN3-202ENST00000537466 JMJD7-PLA2G4BH0Y9G9 81 aa9.09□□□□□ -0.95
GPN3-202ENST00000537466 A8MUU9 505 aa9.08□□□□□ -0.96
GPN3-202ENST00000537466 Q6ZQT0 140 aa9.08□□□□□ -0.96
GPN3-202ENST00000537466 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
GPN3-202ENST00000537466 LINC00313P59037 77 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms