RNA–Protein interactions for RNA: ENST00000537007.5

MRPL48-208, Transcript of mitochondrial ribosomal protein L48, human

TSL 3

Gene MRPL48, Length 287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-208	ENST00000537007	FAM167A-AS1	Q96KT0	104 aa		1.04	□□□□□ -2.24
MRPL48-208	ENST00000537007	CIB3	Q96Q77	187 aa	Predicted RBP	1.04	□□□□□ -2.24
MRPL48-208	ENST00000537007	BATF3	Q9NR55	127 aa		1.04	□□□□□ -2.24
MRPL48-208	ENST00000537007	SPANXA1	Q9NS26	97 aa		1.04	□□□□□ -2.24
MRPL48-208	ENST00000537007	TRAV1-2	A0A0B4J238	106 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	TRBV30	A0A0K0K1B3	111 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	LOC100130705	A0A1B0GUX0	176 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007		M0QY20	66 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	HIST1H2BK	O60814	126 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	HIST1H2BJ	P06899	126 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	S100A11	P31949	105 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	RPL35	P42766	123 aa	Known RBP	1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	TMBIM6	P55061	237 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	HBB	P68871	147 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	RNASE10	Q5GAN6	216 aa	Known RBP	1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	C9orf153	Q5TBE3	101 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	COA5	Q86WW8	74 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	OTOR	Q9NRC9	128 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	MED9	Q9NWA0	146 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	TMEM242	Q9NWH2	141 aa		1.03	□□□□□ -2.24
MRPL48-208	ENST00000537007	TRAV13-1	A0A0B4J241	112 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	TRAV12-1	A0A0B4J245	112 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007		J3KT08	172 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007		K7ERJ3	54 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	MGP	P08493	103 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	ZNF25	P17030	456 aa	Predicted RBP	1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	FOXA3	P55318	350 aa	Predicted RBP	1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	OR10AG1	Q8NH19	301 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	SPRR2G	Q9BYE4	73 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	CDC42SE2	Q9NRR3	84 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	NAT8B	Q9UHF3	227 aa		1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007	LSM2	Q9Y333	95 aa	Known RBP	1.02	□□□□□ -2.25
MRPL48-208	ENST00000537007		A0A1B0GX51	115 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	C17orf112	F2Z3M2	114 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	FABP2	P12104	132 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	SDC2	P34741	201 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	ROMO1	P60602	79 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	NCS1	P62166	190 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	RPS28	P62857	69 aa	Known RBP	1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	UBE2L3	P68036	154 aa	Known RBP	1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	MT1X	P80297	61 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	KRTAP13-4	Q3LI77	160 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	TMEM254	Q8TBM7	123 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	CYSTM1	Q9H1C7	97 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	SPANXC	Q9NY87	97 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	PSENEN	Q9NZ42	101 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	ARL2-SNX15	V9GYD0	113 aa		1.01	□□□□□ -2.25
MRPL48-208	ENST00000537007	TRBV7-6	A0A0J9YX20	115 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	TRBV6-5	A0A0K0K1A5	114 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	SSSCA1	O60232	199 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	CRIP1	P50238	77 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	NDUFA6	P56556	154 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	TMEM14EP	Q6UXP3	125 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	SFT2D1	Q8WV19	159 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	CHCHD1	Q96BP2	118 aa	Known RBP	1	□□□□□ -2.25
MRPL48-208	ENST00000537007	NIT2	Q9NQR4	276 aa		1	□□□□□ -2.25
MRPL48-208	ENST00000537007	BORCS7-ASMT	A0A0B4J1R7	106 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	C9orf170	A2RU37	121 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	NCR2	O95944	276 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	FAM74A1	Q5RGS3	127 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	SPANXN1	Q5VSR9	72 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	TMEM229B	Q8NBD8	167 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	ZNF625	Q96I27	306 aa	Predicted RBP	0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007	AP1S3	Q96PC3	154 aa		0.99	□□□□□ -2.25
MRPL48-208	ENST00000537007		A0A087WSZ3	146 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	TRBV27	A0A0K0K1C4	114 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	FAM236A	A0A1B0GUQ0	79 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	UBE2L5P	A0A1B0GUS4	154 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	FAM236B	A0A1B0GV22	79 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	hDV103S1	A0JD37	113 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	ARPC5	O15511	151 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	LYRM1	O43325	122 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	CD3D	P04234	171 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	SLC25A6	P12236	298 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	S100A12	P80511	92 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	KRTAP19-3	Q7Z4W3	81 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	S100A16	Q96FQ6	103 aa	Known RBP	0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	GGACT	Q9BVM4	153 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	GSKIP	Q9P0R6	139 aa		0.98	□□□□□ -2.25
MRPL48-208	ENST00000537007	ERC2-IT1	O76042	136 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	DPM2	O94777	84 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	KRTAP12-1	P59990	96 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	MRPS36	P82909	103 aa	Known RBP	0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	SNX29P2	Q8IUI4	249 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	RAB37	Q96AX2	223 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	PRELID3A	Q96N28	172 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007		Q96NJ1	140 aa		0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007	NAA38	Q9BRA0	125 aa	Known RBP	0.97	□□□□□ -2.25
MRPL48-208	ENST00000537007		H3BMG7	143 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	FABP4	P15090	132 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	CKS1B	P61024	79 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007		Q5XG85	94 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007		Q6ZUT4	128 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	C5orf17	Q8NAS9	161 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	RPL39L	Q96EH5	51 aa	Known RBP	0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	FAM107B	Q9H098	131 aa		0.96	□□□□□ -2.26
MRPL48-208	ENST00000537007	SYNE1	Q8NF91	8797 aa	Known RBP	0.95	□□□□□ -2.26
MRPL48-208	ENST00000537007		C9JAW5	83 aa		0.95	□□□□□ -2.26
MRPL48-208	ENST00000537007	KRTAP12-4	P60329	112 aa		0.95	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms