RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RPL39LQ96EH5 51 aaKnown RBP2.47□□□□□ -2.01
CASP4-213ENST00000534356 PMCHL2Q9BQD1 86 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 ST20Q9HBF5 79 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 TMEM242Q9NWH2 141 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 LINC00959A0A1B0GUT2 108 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 UQCRQO14949 82 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 APOMO95445 188 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 TRGC1P0CF51 173 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 FGF6P10767 208 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 FABP2P12104 132 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 ZNF345Q14585 488 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 HRCT1Q6UXD1 115 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 Q6ZUT4 128 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 DIRC1Q969H9 104 aa2.46□□□□□ -2.02
CASP4-213ENST00000534356 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
CASP4-213ENST00000534356 LOC107984640A0A0U1RRK4 108 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 H3BRM9 83 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 TAX1BP3O14907 124 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 UBE2L6O14933 153 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 SNCGO76070 127 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 IGLC3P0DOY3 106 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 ADCYAP1P18509 176 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 TSPEAR-AS2P59090 65 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 MRPL51Q4U2R6 128 aaKnown RBP2.45□□□□□ -2.02
CASP4-213ENST00000534356 RPL7L1Q6DKI1 246 aaKnown RBP2.45□□□□□ -2.02
CASP4-213ENST00000534356 C5orf38Q86SI9 138 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 IMUPQ9GZP8 106 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 TMEM167BQ9NRX6 74 aa2.45□□□□□ -2.02
CASP4-213ENST00000534356 IGHV1-58A0A0C4DH39 117 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 CCDC179H3BU77 68 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 J3QQQ9 107 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 HINT1P49773 126 aaPredicted RBP2.44□□□□□ -2.02
CASP4-213ENST00000534356 UBE2D1P51668 147 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 KRTAP19-2Q3LHN2 52 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 SPATA45Q537H7 98 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 C9orf153Q5TBE3 101 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 ATOH7Q8N100 152 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 Q8NDZ9 215 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
CASP4-213ENST00000534356 C19orf71A6NCJ1 209 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 TRACP01848 142 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 TRGC2P03986 189 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 UBE2G1P62253 170 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 CCL20P78556 96 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 SS18Q15532 418 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 FAM229BQ4G0N7 80 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 LINC01545Q5VT33 79 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 UNQ6190/PRO20217Q6UXQ8 127 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 BAGE2Q86Y30 109 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 DAND5Q8N907 189 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 LINC00474Q9P2X8 69 aa2.43□□□□□ -2.02
CASP4-213ENST00000534356 TRAV13-1A0A0B4J241 112 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 TRAV1-1A0A0B4J248 108 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 CTXND1A0A1B0GTU2 59 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 COX7A2LO14548 114 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 CRYGAP11844 174 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 MT1HP80294 61 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 PRR15Q8IV56 129 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 CDC42SE2Q9NRR3 84 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 C6orf48Q9UBA6 75 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 SPCS1Q9Y6A9 102 aa2.42□□□□□ -2.02
CASP4-213ENST00000534356 USH2AO75445 5202 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 TRBV20-1A0A075B6N2 111 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 FXYD6-FXYD2A0A087WZ82 144 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 A0A1W2PPM0 123 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 UMAD1C9J7I0 102 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 H3BMG7 143 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 CXCL1P09341 107 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 MRPS36P82909 103 aaKnown RBP2.41□□□□□ -2.02
CASP4-213ENST00000534356 SERF2P84101 59 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 BVES-AS1Q5T3Y7 98 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 Q5XG85 94 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 C2orf82Q6UX34 121 aa2.41□□□□□ -2.02
CASP4-213ENST00000534356 NAA38Q9BRA0 125 aaKnown RBP2.41□□□□□ -2.02
CASP4-213ENST00000534356 TRAV9-1A0A075B6T8 112 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 MT-ATP8P03928 68 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 UBE2BP63146 152 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 SPAG11BQ08648 103 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 SERP1Q9Y6X1 66 aa2.4□□□□□ -2.03
CASP4-213ENST00000534356 TRBV20OR9-2A0A075B6H5 130 aa2.39□□□□□ -2.03
CASP4-213ENST00000534356 A8MUN3 132 aa2.39□□□□□ -2.03
CASP4-213ENST00000534356 LST1O00453 97 aa2.39□□□□□ -2.03
CASP4-213ENST00000534356 NPC2P61916 151 aa2.39□□□□□ -2.03
CASP4-213ENST00000534356 TPRXLQ17RH7 258 aa2.39□□□□□ -2.03
CASP4-213ENST00000534356 C18orf32Q8TCD1 76 aa2.39□□□□□ -2.03
CASP4-213ENST00000534356 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
CASP4-213ENST00000534356 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
CASP4-213ENST00000534356 I3L3M4 83 aa2.38□□□□□ -2.03
CASP4-213ENST00000534356 COX7CP15954 63 aa2.38□□□□□ -2.03
CASP4-213ENST00000534356 POLR2KP53803 58 aaKnown RBP2.38□□□□□ -2.03
CASP4-213ENST00000534356 ASB16-AS1Q495Z4 193 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms