RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
SVIP-205ENST00000533774 TRBV20-1A0A075B6N2 111 aa6.06□□□□□ -1.44
SVIP-205ENST00000533774 J3QQQ9 107 aa6.06□□□□□ -1.44
SVIP-205ENST00000533774 SCGB1A1P11684 91 aa6.06□□□□□ -1.44
SVIP-205ENST00000533774 COX7BP24311 80 aa6.06□□□□□ -1.44
SVIP-205ENST00000533774 VAMP3Q15836 100 aa6.06□□□□□ -1.44
SVIP-205ENST00000533774 DLEU1O43261 78 aa6.05□□□□□ -1.44
SVIP-205ENST00000533774 OR13C6PQ8NH95 151 aa6.05□□□□□ -1.44
SVIP-205ENST00000533774 C14orf144Q96I85 54 aa6.05□□□□□ -1.44
SVIP-205ENST00000533774 KRTAP4-2Q9BYR5 136 aa6.05□□□□□ -1.44
SVIP-205ENST00000533774 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
SVIP-205ENST00000533774 RHEBQ15382 184 aa6.04□□□□□ -1.44
SVIP-205ENST00000533774 C6orf99Q4VX62 202 aa6.04□□□□□ -1.44
SVIP-205ENST00000533774 Q96NJ1 140 aa6.04□□□□□ -1.44
SVIP-205ENST00000533774 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
SVIP-205ENST00000533774 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
SVIP-205ENST00000533774 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
SVIP-205ENST00000533774 TRAPPC1Q9Y5R8 145 aa6.02□□□□□ -1.45
SVIP-205ENST00000533774 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
SVIP-205ENST00000533774 A0A1B0GV72 72 aa6.01□□□□□ -1.45
SVIP-205ENST00000533774 A8MUU9 505 aa6.01□□□□□ -1.45
SVIP-205ENST00000533774 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
SVIP-205ENST00000533774 LGALS3P17931 250 aaKnown RBP6.01□□□□□ -1.45
SVIP-205ENST00000533774 NMUP48645 174 aa6.01□□□□□ -1.45
SVIP-205ENST00000533774 MPLKIPQ8TAP9 179 aa6.01□□□□□ -1.45
SVIP-205ENST00000533774 LITAFQ99732 161 aa6□□□□□ -1.45
SVIP-205ENST00000533774 IGFL1Q6UW32 110 aa5.99□□□□□ -1.45
SVIP-205ENST00000533774 LINC00308Q8TCZ7 52 aa5.99□□□□□ -1.45
SVIP-205ENST00000533774 SPANXDQ9BXN6 97 aa5.99□□□□□ -1.45
SVIP-205ENST00000533774 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
SVIP-205ENST00000533774 TMEM218A2RU14 115 aa5.98□□□□□ -1.45
SVIP-205ENST00000533774 HRES1P13985 223 aa5.98□□□□□ -1.45
SVIP-205ENST00000533774 TRBV7-7A0A0K0K1E9 115 aa5.97□□□□□ -1.45
SVIP-205ENST00000533774 MTURNQ8N3F0 131 aa5.97□□□□□ -1.45
SVIP-205ENST00000533774 CHCHD1Q96BP2 118 aaKnown RBP5.96□□□□□ -1.46
SVIP-205ENST00000533774 PMCHL2Q9BQD1 86 aa5.96□□□□□ -1.46
SVIP-205ENST00000533774 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
SVIP-205ENST00000533774 HERVK_113P61574 105 aa5.93□□□□□ -1.46
SVIP-205ENST00000533774 A0A1B0GWB2 263 aa5.92□□□□□ -1.46
SVIP-205ENST00000533774 PLNP26678 52 aa5.92□□□□□ -1.46
SVIP-205ENST00000533774 DPM2O94777 84 aa5.91□□□□□ -1.46
SVIP-205ENST00000533774 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
SVIP-205ENST00000533774 TSTD3H0UI37 97 aa5.9□□□□□ -1.46
SVIP-205ENST00000533774 IGKCP01834 107 aa5.9□□□□□ -1.46
SVIP-205ENST00000533774 CLLU1Q5K131 121 aa5.9□□□□□ -1.46
SVIP-205ENST00000533774 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
SVIP-205ENST00000533774 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.46
SVIP-205ENST00000533774 UQCC3Q6UW78 93 aa5.89□□□□□ -1.47
SVIP-205ENST00000533774 CLEC2BQ92478 149 aa5.89□□□□□ -1.47
SVIP-205ENST00000533774 E9PLD3 99 aa5.88□□□□□ -1.47
SVIP-205ENST00000533774 LST1O00453 97 aa5.88□□□□□ -1.47
SVIP-205ENST00000533774 HSBP1O75506 76 aa5.88□□□□□ -1.47
SVIP-205ENST00000533774 F8WEM9 126 aa5.87□□□□□ -1.47
SVIP-205ENST00000533774 TIMM17BO60830 172 aa5.87□□□□□ -1.47
SVIP-205ENST00000533774 LEPROTL1O95214 131 aa5.87□□□□□ -1.47
SVIP-205ENST00000533774 DSCR10P59022 87 aa5.87□□□□□ -1.47
SVIP-205ENST00000533774 SEC61GP60059 68 aa5.87□□□□□ -1.47
SVIP-205ENST00000533774 Q6JHZ5 121 aa5.87□□□□□ -1.47
SVIP-205ENST00000533774 SERF1AO75920 110 aa5.86□□□□□ -1.47
SVIP-205ENST00000533774 TTTY13Q9BZ97 58 aa5.85□□□□□ -1.47
SVIP-205ENST00000533774 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
SVIP-205ENST00000533774 OCIAD2Q56VL3 154 aa5.84□□□□□ -1.47
SVIP-205ENST00000533774 FABP4P15090 132 aa5.83□□□□□ -1.48
SVIP-205ENST00000533774 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
SVIP-205ENST00000533774 Q6ZVH6 145 aa5.82□□□□□ -1.48
SVIP-205ENST00000533774 YPEL4Q96NS1 127 aa5.82□□□□□ -1.48
SVIP-205ENST00000533774 KMT2DO14686 5537 aa5.81□□□□□ -1.48
SVIP-205ENST00000533774 A6NDN8 102 aa5.81□□□□□ -1.48
SVIP-205ENST00000533774 M0R143 59 aa5.81□□□□□ -1.48
SVIP-205ENST00000533774 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
SVIP-205ENST00000533774 VPS25Q9BRG1 176 aa5.81□□□□□ -1.48
SVIP-205ENST00000533774 NHP2Q9NX24 153 aaKnown RBP5.81□□□□□ -1.48
SVIP-205ENST00000533774 TRAV13-2A0A0B4J235 113 aa5.8□□□□□ -1.48
SVIP-205ENST00000533774 A8MWP4 228 aa5.8□□□□□ -1.48
SVIP-205ENST00000533774 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
SVIP-205ENST00000533774 Q6ZQY7 126 aa5.8□□□□□ -1.48
SVIP-205ENST00000533774 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
SVIP-205ENST00000533774 H3BUT2 72 aa5.79□□□□□ -1.48
SVIP-205ENST00000533774 K7ERU9 68 aa5.79□□□□□ -1.48
SVIP-205ENST00000533774 LINC00575Q6W349 94 aa5.78□□□□□ -1.48
SVIP-205ENST00000533774 HSPB8Q9UJY1 196 aa5.78□□□□□ -1.48
SVIP-205ENST00000533774 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
SVIP-205ENST00000533774 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
SVIP-205ENST00000533774 COLCA2A8K830 154 aa5.74□□□□□ -1.49
SVIP-205ENST00000533774 PYY3Q5JQD4 70 aa5.74□□□□□ -1.49
SVIP-205ENST00000533774 SNHG12Q9BXW3 62 aa5.74□□□□□ -1.49
SVIP-205ENST00000533774 SS18L2Q9UHA2 77 aa5.74□□□□□ -1.49
SVIP-205ENST00000533774 hADV29S1A0JD25 119 aa5.73□□□□□ -1.49
SVIP-205ENST00000533774 A6NN06 94 aa5.73□□□□□ -1.49
SVIP-205ENST00000533774 LINC00313P59037 77 aa5.73□□□□□ -1.49
SVIP-205ENST00000533774 UBE2V1Q13404 147 aa5.73□□□□□ -1.49
SVIP-205ENST00000533774 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
SVIP-205ENST00000533774 SNRPEP62304 92 aaKnown RBP5.72□□□□□ -1.49
SVIP-205ENST00000533774 A0A087WSZ3 146 aa5.71□□□□□ -1.5
SVIP-205ENST00000533774 TRGC2P03986 189 aa5.71□□□□□ -1.5
SVIP-205ENST00000533774 APOC3P02656 99 aa5.7□□□□□ -1.5
SVIP-205ENST00000533774 IFITM1P13164 125 aa5.7□□□□□ -1.5
SVIP-205ENST00000533774 SIGMAR1Q99720 223 aa5.7□□□□□ -1.5
SVIP-205ENST00000533774 SYS1-DBNDD2H3BUS1 97 aa5.69□□□□□ -1.5
SVIP-205ENST00000533774 S100A2P29034 98 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms