RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DNAH14Q0VDD8 3507 aa11.12□□□□□ -0.63
PHRF1-205ENST00000533464 Q8NDZ9 215 aa11.11□□□□□ -0.63
PHRF1-205ENST00000533464 FRYLO94915 3013 aa11.09□□□□□ -0.63
PHRF1-205ENST00000533464 BOD1L1Q8NFC6 3051 aa11.07□□□□□ -0.64
PHRF1-205ENST00000533464 TACC2O95359 2948 aa11.07□□□□□ -0.64
PHRF1-205ENST00000533464 KALRNO60229 2985 aa11.07□□□□□ -0.64
PHRF1-205ENST00000533464 ADGRG4Q8IZF6 3080 aa11.06□□□□□ -0.64
PHRF1-205ENST00000533464 TNP2Q05952 138 aa11.06□□□□□ -0.64
PHRF1-205ENST00000533464 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
PHRF1-205ENST00000533464 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.05□□□□□ -0.64
PHRF1-205ENST00000533464 COL12A1Q99715 3063 aa11.04□□□□□ -0.64
PHRF1-205ENST00000533464 ITPR1Q14643 2758 aa11.03□□□□□ -0.64
PHRF1-205ENST00000533464 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
PHRF1-205ENST00000533464 OCR1Q9BZK8 76 aa11□□□□□ -0.65
PHRF1-205ENST00000533464 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
PHRF1-205ENST00000533464 DMXL2Q8TDJ6 3036 aa10.97□□□□□ -0.65
PHRF1-205ENST00000533464 NSD1Q96L73 2696 aaPredicted RBP10.97□□□□□ -0.65
PHRF1-205ENST00000533464 UQCR11O14957 56 aa10.95□□□□□ -0.66
PHRF1-205ENST00000533464 SPRR1AP35321 89 aa10.95□□□□□ -0.66
PHRF1-205ENST00000533464 J3QL48 77 aa10.94□□□□□ -0.66
PHRF1-205ENST00000533464 SPANXA2-OT1Q8N9U9 137 aa10.92□□□□□ -0.66
PHRF1-205ENST00000533464 COL6A3P12111 3177 aa10.91□□□□□ -0.66
PHRF1-205ENST00000533464 BAHCC1Q9P281 2608 aa10.91□□□□□ -0.66
PHRF1-205ENST00000533464 KRTAP1-5Q9BYS1 174 aa10.89□□□□□ -0.67
PHRF1-205ENST00000533464 KRTAP26-1Q6PEX3 210 aa10.88□□□□□ -0.67
PHRF1-205ENST00000533464 CD164Q04900 197 aa10.86□□□□□ -0.67
PHRF1-205ENST00000533464 LRBAP50851 2863 aa10.85□□□□□ -0.67
PHRF1-205ENST00000533464 MIR22HGQ0VDD5 57 aa10.84□□□□□ -0.67
PHRF1-205ENST00000533464 ITPR2Q14571 2701 aa10.84□□□□□ -0.67
PHRF1-205ENST00000533464 Q8N1X5 172 aa10.84□□□□□ -0.67
PHRF1-205ENST00000533464 PLAC8Q9NZF1 115 aa10.83□□□□□ -0.68
PHRF1-205ENST00000533464 STAB2Q8WWQ8 2551 aa10.82□□□□□ -0.68
PHRF1-205ENST00000533464 ZZEF1O43149 2961 aa10.81□□□□□ -0.68
PHRF1-205ENST00000533464 REV3LO60673 3130 aa10.8□□□□□ -0.68
PHRF1-205ENST00000533464 PRR26Q8N8Z3 221 aa10.8□□□□□ -0.68
PHRF1-205ENST00000533464 ASH1LQ9NR48 2969 aaKnown RBP10.77□□□□□ -0.69
PHRF1-205ENST00000533464 SPEGQ15772 3267 aa10.77□□□□□ -0.69
PHRF1-205ENST00000533464 COX6B2Q6YFQ2 88 aa10.76□□□□□ -0.69
PHRF1-205ENST00000533464 SPRR1BP22528 89 aa10.76□□□□□ -0.69
PHRF1-205ENST00000533464 MMP24-AS1A0A0U1RRL7 71 aa10.76□□□□□ -0.69
PHRF1-205ENST00000533464 CFAP47Q6ZTR5 3102 aa10.75□□□□□ -0.69
PHRF1-205ENST00000533464 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
PHRF1-205ENST00000533464 CYSTM1Q9H1C7 97 aa10.74□□□□□ -0.69
PHRF1-205ENST00000533464 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
PHRF1-205ENST00000533464 UTP20O75691 2785 aaKnown RBP10.73□□□□□ -0.69
PHRF1-205ENST00000533464 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.69
PHRF1-205ENST00000533464 LINC00472Q9H8W2 130 aa10.71□□□□□ -0.69
PHRF1-205ENST00000533464 HRES1P13985 223 aa10.68□□□□□ -0.7
PHRF1-205ENST00000533464 Q1T7F1 81 aa10.66□□□□□ -0.7
PHRF1-205ENST00000533464 RBM12B-AS1Q9P1G2 102 aa10.65□□□□□ -0.71
PHRF1-205ENST00000533464 HIVEP1P15822 2718 aa10.65□□□□□ -0.71
PHRF1-205ENST00000533464 Q8N9P0 234 aaPredicted RBP10.63□□□□□ -0.71
PHRF1-205ENST00000533464 ZANQ9Y493 2812 aa10.62□□□□□ -0.71
PHRF1-205ENST00000533464 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
PHRF1-205ENST00000533464 CDC42SE1Q9NRR8 79 aa10.61□□□□□ -0.71
PHRF1-205ENST00000533464 CELSR2Q9HCU4 2923 aa10.6□□□□□ -0.71
PHRF1-205ENST00000533464 KRTAP4-16G5E9R7 235 aaPredicted RBP10.6□□□□□ -0.71
PHRF1-205ENST00000533464 DMXL1Q9Y485 3027 aa10.59□□□□□ -0.71
PHRF1-205ENST00000533464 NIPBLQ6KC79 2804 aaeCLIP10.58□□□□□ -0.71
PHRF1-205ENST00000533464 SPINT4Q6UDR6 99 aa10.58□□□□□ -0.72
PHRF1-205ENST00000533464 APCP25054 2843 aa10.58□□□□□ -0.72
PHRF1-205ENST00000533464 PANO1I0J062 215 aa10.58□□□□□ -0.72
PHRF1-205ENST00000533464 TNRC18O15417 2968 aaPredicted RBP10.57□□□□□ -0.72
PHRF1-205ENST00000533464 A0A0D9SG42 100 aa10.57□□□□□ -0.72
PHRF1-205ENST00000533464 KRTAP10-2P60368 255 aa10.55□□□□□ -0.72
PHRF1-205ENST00000533464 KTN1-AS1Q86SY8 53 aa10.55□□□□□ -0.72
PHRF1-205ENST00000533464 CRIPTQ9P021 101 aa10.54□□□□□ -0.72
PHRF1-205ENST00000533464 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
PHRF1-205ENST00000533464 FLG2Q5D862 2391 aaPredicted RBP10.54□□□□□ -0.72
PHRF1-205ENST00000533464 ZCCHC13Q8WW36 166 aaKnown RBP10.54□□□□□ -0.72
PHRF1-205ENST00000533464 LINC01554Q52M75 96 aa10.53□□□□□ -0.72
PHRF1-205ENST00000533464 KMT2BQ9UMN6 2715 aaPredicted RBP10.52□□□□□ -0.72
PHRF1-205ENST00000533464 FP248Q71RG6 208 aaPredicted RBP10.52□□□□□ -0.72
PHRF1-205ENST00000533464 Q5W150 140 aa10.51□□□□□ -0.73
PHRF1-205ENST00000533464 Q6ZSA8 131 aa10.51□□□□□ -0.73
PHRF1-205ENST00000533464 Q5XG85 94 aa10.51□□□□□ -0.73
PHRF1-205ENST00000533464 LOC400499M0QZD8 3231 aa10.5□□□□□ -0.73
PHRF1-205ENST00000533464 USP34Q70CQ2 3546 aa10.47□□□□□ -0.73
PHRF1-205ENST00000533464 DMBT1Q9UGM3 2413 aaPredicted RBP10.47□□□□□ -0.73
PHRF1-205ENST00000533464 LINC00483Q53H64 154 aa10.46□□□□□ -0.73
PHRF1-205ENST00000533464 Q75L30 129 aa10.46□□□□□ -0.73
PHRF1-205ENST00000533464 DCHS2Q6V1P9 2916 aa10.46□□□□□ -0.73
PHRF1-205ENST00000533464 LINC01558Q9Y6Z2 57 aa10.46□□□□□ -0.74
PHRF1-205ENST00000533464 Q6ZR54 194 aa10.45□□□□□ -0.74
PHRF1-205ENST00000533464 TENM4Q6N022 2769 aa10.45□□□□□ -0.74
PHRF1-205ENST00000533464 A0A1B0GU33 70 aa10.43□□□□□ -0.74
PHRF1-205ENST00000533464 LCA10Q71F78 164 aa10.43□□□□□ -0.74
PHRF1-205ENST00000533464 CRYBG3Q68DQ2 2970 aa10.4□□□□□ -0.74
PHRF1-205ENST00000533464 SPINK7P58062 85 aa10.39□□□□□ -0.75
PHRF1-205ENST00000533464 LCE6AA0A183 80 aa10.39□□□□□ -0.75
PHRF1-205ENST00000533464 OXTP01178 125 aa10.38□□□□□ -0.75
PHRF1-205ENST00000533464 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
PHRF1-205ENST00000533464 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
PHRF1-205ENST00000533464 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
PHRF1-205ENST00000533464 NF1P21359 2839 aa10.35□□□□□ -0.75
PHRF1-205ENST00000533464 KRTAP7-1Q8IUC3 87 aa10.34□□□□□ -0.75
PHRF1-205ENST00000533464 Q5VV11 94 aa10.34□□□□□ -0.75
PHRF1-205ENST00000533464 A0A087X002 238 aa10.32□□□□□ -0.76
PHRF1-205ENST00000533464 FBN2P35556 2912 aa10.32□□□□□ -0.76
PHRF1-205ENST00000533464 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms