RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 NXT2Q9NPJ8 142 aaKnown RBP2.05□□□□□ -2.08
PTPRC-213ENST00000529828 M0R378 163 aa2.04□□□□□ -2.08
PTPRC-213ENST00000529828 POLR2KP53803 58 aaKnown RBP2.04□□□□□ -2.08
PTPRC-213ENST00000529828 LINC00173Q6ZV60 143 aa2.04□□□□□ -2.08
PTPRC-213ENST00000529828 LCA10Q71F78 164 aa2.04□□□□□ -2.08
PTPRC-213ENST00000529828 NOTCH2NLQ7Z3S9 236 aa2.04□□□□□ -2.08
PTPRC-213ENST00000529828 KRTAP4-1Q9BYQ7 146 aa2.04□□□□□ -2.08
PTPRC-213ENST00000529828 A8MUN3 132 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 ZNF73O43830 326 aaPredicted RBP2.03□□□□□ -2.08
PTPRC-213ENST00000529828 TLX1NBP0CAT3 122 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 MP68P56378 58 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 RPL39P62891 51 aaKnown RBP2.03□□□□□ -2.08
PTPRC-213ENST00000529828 TPRXLQ17RH7 258 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 FP248Q71RG6 208 aaPredicted RBP2.03□□□□□ -2.08
PTPRC-213ENST00000529828 LINC00304Q8N9R0 145 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 TIMM17AQ99595 171 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 LST1O00453 97 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
PTPRC-213ENST00000529828 TMEM170BQ5T4T1 132 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 XAGE1AQ9HD64 81 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 C22orf24Q9Y442 160 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 USH2AO75445 5202 aa2.03□□□□□ -2.08
PTPRC-213ENST00000529828 RPL37AP8A6NKH3 93 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 PSPHP1O15172 72 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 RPL28P46779 137 aaKnown RBP2.02□□□□□ -2.09
PTPRC-213ENST00000529828 SEC61BP60468 96 aaKnown RBP2.02□□□□□ -2.09
PTPRC-213ENST00000529828 KIAA0087Q14695 138 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 FAM104BQ5XKR9 115 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 FAM19A3Q7Z5A8 133 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 LINC00643Q86TS7 51 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 FAM104AQ969W3 186 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 BCE1O60756 84 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 TIMM17BO60830 172 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 HBDP02042 147 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 HERVK_113P61574 105 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 SFTA2Q6UW10 78 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 ORMDL3Q8N138 153 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 NRACQ8N912 160 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 NKAPP1Q8N9T2 125 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 TMEM141Q96I45 108 aa2.02□□□□□ -2.09
PTPRC-213ENST00000529828 TRAV12-1A0A0B4J245 112 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 TRBV30A0A0K0K1B3 111 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 HIGD1CA8MV81 97 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 NDUFC1O43677 76 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 CXCL6P80162 114 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 Q8N8P6 123 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 TIMM21Q9BVV7 248 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 IGKV2D-26A0A0A0MRZ7 120 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 UBE2AP49459 152 aa2.01□□□□□ -2.09
PTPRC-213ENST00000529828 LEPROTL1O95214 131 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 NPYP01303 97 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 CCKP06307 115 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 PRLHP81277 87 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 C6orf99Q4VX62 202 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 LINC00337Q8N6G1 96 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 LINC00167Q96N53 147 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 NHP2Q9NX24 153 aaKnown RBP2□□□□□ -2.09
PTPRC-213ENST00000529828 FLGP20930 4061 aaPredicted RBP2□□□□□ -2.09
PTPRC-213ENST00000529828 IGKV2-28A0A075B6P5 120 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 IGHV6-1A0A0B4J1U7 121 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 MYMXA0A1B0GTQ4 84 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 IGKV2D-28P01615 120 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 PRSS2P07478 247 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 LINC00313P59037 77 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 KRTAP13-3Q3SY46 172 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 ASB16-AS1Q495Z4 193 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 MRPL51Q4U2R6 128 aaKnown RBP2□□□□□ -2.09
PTPRC-213ENST00000529828 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
PTPRC-213ENST00000529828 K7ERJ3 54 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 SLC25A20O43772 301 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 CKS2P33552 79 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 FXYD2P54710 66 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 FAM229BQ4G0N7 80 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 KRTAP13-1Q8IUC0 172 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 FAM19A2Q8N3H0 131 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 SMIM2Q9BVW6 85 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 TP73-AS1Q9UF72 201 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 IGLV4-3A0A075B6K6 122 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 D6R8Y8 96 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 PLNP26678 52 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 MT1HP80294 61 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 ATP11AUNQ6ZP68 121 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 DAND5Q8N907 189 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 IFI27L1Q96BM0 104 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 HIST1H4GQ99525 98 aa1.99□□□□□ -2.09
PTPRC-213ENST00000529828 A0A0J9YXY3 114 aa1.98□□□□□ -2.09
PTPRC-213ENST00000529828 IFI27P40305 119 aaPredicted RBP1.98□□□□□ -2.09
PTPRC-213ENST00000529828 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
PTPRC-213ENST00000529828 KRTAP4-3Q9BYR4 195 aa1.98□□□□□ -2.09
PTPRC-213ENST00000529828 KLKP1Q107X0 134 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 Q1T7F1 81 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
PTPRC-213ENST00000529828 A0A1B0GW54 56 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 F8VRH5 84 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 H7BZZ5 65 aa1.97□□□□□ -2.09
PTPRC-213ENST00000529828 KRTAP10-7P60409 375 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms