RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 H0Y9J4 135 aa2.81□□□□□ -1.96
USP47-208ENST00000529813 BCE1O60756 84 aa2.81□□□□□ -1.96
USP47-208ENST00000529813 VPREB1P12018 145 aa2.81□□□□□ -1.96
USP47-208ENST00000529813 Q8NDZ9 215 aa2.81□□□□□ -1.96
USP47-208ENST00000529813 SMCR5Q8TEV8 140 aa2.81□□□□□ -1.96
USP47-208ENST00000529813 M0R378 163 aa2.81□□□□□ -1.96
USP47-208ENST00000529813 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
USP47-208ENST00000529813 TRBV10-3A0A0K0K1G6 114 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 TRIAP1O43715 76 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 COX7CP15954 63 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 RPS28P62857 69 aaKnown RBP2.8□□□□□ -1.96
USP47-208ENST00000529813 CLEC2BQ92478 149 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
USP47-208ENST00000529813 SEC61GP60059 68 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 ATXN8Q156A1 80 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 LINC01600Q96MT4 127 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 TRACP01848 142 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 PRR4Q16378 134 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 ADAMTSL4-AS1Q5T5F5 129 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 MT1HL1P0DM35 61 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 CRYGAP11844 174 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 MUSTN1Q8IVN3 82 aa2.79□□□□□ -1.96
USP47-208ENST00000529813 A0A0U1RQV1 116 aa2.78□□□□□ -1.96
USP47-208ENST00000529813 FAM236DA0A1B0GTK5 79 aa2.78□□□□□ -1.96
USP47-208ENST00000529813 GHRHP01286 108 aa2.78□□□□□ -1.96
USP47-208ENST00000529813 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
USP47-208ENST00000529813 A0A087WVE0 104 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 IGLV5-37A0A075B6J1 123 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 IGLV9-49A0A0B4J1Y8 123 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 FAM240AA0A1B0GVK7 77 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 LINC00308Q8TCZ7 52 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 IMUPQ9GZP8 106 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 A0A087X002 238 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 DEFB105AQ8NG35 78 aa2.77□□□□□ -1.97
USP47-208ENST00000529813 TRAV23DV6A0A075B6W5 121 aa2.76□□□□□ -1.97
USP47-208ENST00000529813 TMEM258P61165 79 aa2.76□□□□□ -1.97
USP47-208ENST00000529813 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
USP47-208ENST00000529813 PRYO14603 147 aa2.76□□□□□ -1.97
USP47-208ENST00000529813 LINC00643Q86TS7 51 aa2.76□□□□□ -1.97
USP47-208ENST00000529813 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 IGKV3D-7A0A0C4DH55 119 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 H3BT86 120 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 SPANXCQ9NY87 97 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 V9GYY9 64 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
USP47-208ENST00000529813 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 ATOX1O00244 68 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 ERC2-IT1O76042 136 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
USP47-208ENST00000529813 LST1O00453 97 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 KCNQ1DNQ9H478 68 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
USP47-208ENST00000529813 COX6CP09669 75 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 HIST1H4AP62805 103 aaKnown RBP2.74□□□□□ -1.97
USP47-208ENST00000529813 SERP2Q8N6R1 65 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 LINC00304Q8N9R0 145 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 ST20-AS1Q8NBB2 130 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 COPS9Q8WXC6 57 aa2.74□□□□□ -1.97
USP47-208ENST00000529813 MOBPQ13875 183 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 C1orf195Q5TG92 126 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 LINC00337Q8N6G1 96 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 LITAFQ99732 161 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 NDUFC2O95298 119 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 COX7BP24311 80 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 TIMM17BO60830 172 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 ACYP1P07311 99 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 SPANXDQ9BXN6 97 aa2.73□□□□□ -1.97
USP47-208ENST00000529813 IGLV6-57P01721 117 aa2.72□□□□□ -1.97
USP47-208ENST00000529813 Q6ZRX8 168 aa2.72□□□□□ -1.97
USP47-208ENST00000529813 FP248Q71RG6 208 aaPredicted RBP2.72□□□□□ -1.97
USP47-208ENST00000529813 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
USP47-208ENST00000529813 C20orf197Q8N268 126 aa2.72□□□□□ -1.97
USP47-208ENST00000529813 Q8NBF4 154 aa2.72□□□□□ -1.97
USP47-208ENST00000529813 Q9BRP9 147 aa2.72□□□□□ -1.97
USP47-208ENST00000529813 TRAV13-2A0A0B4J235 113 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 BAALC-AS2P0C853 105 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 LRP2P98164 4655 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 FAM218AQ96MZ4 157 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 C14orf132Q9NPU4 83 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 LINC00846Q9NV44 126 aa2.71□□□□□ -1.98
USP47-208ENST00000529813 SPRR1AP35321 89 aa2.7□□□□□ -1.98
USP47-208ENST00000529813 FAM229BQ4G0N7 80 aa2.7□□□□□ -1.98
USP47-208ENST00000529813 SMIM11BQ8TCY0 68 aa2.7□□□□□ -1.98
USP47-208ENST00000529813 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
USP47-208ENST00000529813 DHRS4-AS1Q9P1J3 65 aa2.7□□□□□ -1.98
USP47-208ENST00000529813 LAMTOR3Q9UHA4 124 aa2.7□□□□□ -1.98
USP47-208ENST00000529813 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms